BLASTX nr result

ID: Coptis24_contig00010589 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010589
         (639 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285572.1| PREDICTED: uncharacterized protein LOC100252...   167   1e-39
ref|XP_002515400.1| steroid binding protein, putative [Ricinus c...   166   4e-39
pdb|1J03|A Chain A, Solution Structure Of A Putative Steroid-Bin...   162   4e-38
ref|XP_003522349.1| PREDICTED: probable steroid-binding protein ...   160   1e-37
ref|XP_003526131.1| PREDICTED: probable steroid-binding protein ...   160   2e-37

>ref|XP_002285572.1| PREDICTED: uncharacterized protein LOC100252604 [Vitis vinifera]
           gi|147864286|emb|CAN83013.1| hypothetical protein
           VITISV_010105 [Vitis vinifera]
           gi|296082154|emb|CBI21159.3| unnamed protein product
           [Vitis vinifera]
          Length = 99

 Score =  167 bits (424), Expect = 1e-39
 Identities = 79/99 (79%), Positives = 90/99 (90%)
 Frame = +3

Query: 201 MELTKEQLLQFNGTDSSKPIYVAIKGKIYDVSTGKSFYGPGGSYYMFAGKDASRALGKMS 380
           ME+T EQL QF+G+D SKPIYVA+KG+I+DV+TGKSFYGPGGSY MFAGKDASRAL KMS
Sbjct: 1   MEVTAEQLKQFDGSDPSKPIYVAVKGRIFDVTTGKSFYGPGGSYCMFAGKDASRALAKMS 60

Query: 381 KEEEDVTDCIDGLSEKEMGVLNDWEKKFEAKYPIVGRVI 497
           K EEDV+  +DGLSEKEMGVLNDWE KF+AKYP+VGRVI
Sbjct: 61  KNEEDVSPSLDGLSEKEMGVLNDWENKFQAKYPVVGRVI 99


>ref|XP_002515400.1| steroid binding protein, putative [Ricinus communis]
           gi|223545344|gb|EEF46849.1| steroid binding protein,
           putative [Ricinus communis]
          Length = 101

 Score =  166 bits (419), Expect = 4e-39
 Identities = 75/99 (75%), Positives = 89/99 (89%)
 Frame = +3

Query: 201 MELTKEQLLQFNGTDSSKPIYVAIKGKIYDVSTGKSFYGPGGSYYMFAGKDASRALGKMS 380
           M+ T EQL+QFNGTD SKPIY+AIKG+++DV+ GKSFYGPGGSY MF+GKDASRAL KMS
Sbjct: 1   MDFTAEQLIQFNGTDPSKPIYLAIKGRVFDVTAGKSFYGPGGSYAMFSGKDASRALAKMS 60

Query: 381 KEEEDVTDCIDGLSEKEMGVLNDWEKKFEAKYPIVGRVI 497
           K +ED++  +DGL+EKEMGVLNDWEKKFE KYPIVGRV+
Sbjct: 61  KNDEDISPSLDGLTEKEMGVLNDWEKKFEVKYPIVGRVV 99


>pdb|1J03|A Chain A, Solution Structure Of A Putative Steroid-Binding Protein
           From Arabidopsis
          Length = 102

 Score =  162 bits (411), Expect = 4e-38
 Identities = 75/100 (75%), Positives = 87/100 (87%)
 Frame = +3

Query: 198 PMELTKEQLLQFNGTDSSKPIYVAIKGKIYDVSTGKSFYGPGGSYYMFAGKDASRALGKM 377
           PME T EQL Q+NGTD SKPIYVAIKG+++DV+TGKSFYG GG Y MFAGKDASRALGKM
Sbjct: 2   PMEFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRALGKM 61

Query: 378 SKEEEDVTDCIDGLSEKEMGVLNDWEKKFEAKYPIVGRVI 497
           SK EEDV+  ++GL+EKE+  LNDWE KFEAKYP+VGRV+
Sbjct: 62  SKNEEDVSPSLEGLTEKEINTLNDWETKFEAKYPVVGRVV 101


>ref|XP_003522349.1| PREDICTED: probable steroid-binding protein 3-like [Glycine max]
          Length = 100

 Score =  160 bits (406), Expect = 1e-37
 Identities = 72/99 (72%), Positives = 88/99 (88%)
 Frame = +3

Query: 201 MELTKEQLLQFNGTDSSKPIYVAIKGKIYDVSTGKSFYGPGGSYYMFAGKDASRALGKMS 380
           MELT +QL Q+NGTD SKPIYVA+KG++YDV+TGKSFYGPGG Y MFAGKDASRAL KMS
Sbjct: 1   MELTPQQLSQYNGTDPSKPIYVAVKGRVYDVTTGKSFYGPGGPYAMFAGKDASRALAKMS 60

Query: 381 KEEEDVTDCIDGLSEKEMGVLNDWEKKFEAKYPIVGRVI 497
           K ++D++  +DGLS+KE+GVLNDWE KF+AKYP+V RV+
Sbjct: 61  KNDDDISPSLDGLSDKEIGVLNDWENKFQAKYPVVARVL 99


>ref|XP_003526131.1| PREDICTED: probable steroid-binding protein 3-like [Glycine max]
          Length = 111

 Score =  160 bits (405), Expect = 2e-37
 Identities = 72/103 (69%), Positives = 90/103 (87%)
 Frame = +3

Query: 189 LSSPMELTKEQLLQFNGTDSSKPIYVAIKGKIYDVSTGKSFYGPGGSYYMFAGKDASRAL 368
           L + MELT +QL Q+NGTD SKPIYVA+KG++YDV++GKSFYGPGG Y MFAGKDASRAL
Sbjct: 8   LRNTMELTAQQLSQYNGTDPSKPIYVAVKGRVYDVTSGKSFYGPGGPYAMFAGKDASRAL 67

Query: 369 GKMSKEEEDVTDCIDGLSEKEMGVLNDWEKKFEAKYPIVGRVI 497
            KMSK +ED++  +DGLS+KE+GVLNDWE KF+AKYP+V R++
Sbjct: 68  AKMSKNDEDISPSLDGLSDKEIGVLNDWENKFQAKYPVVARLL 110


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