BLASTX nr result

ID: Coptis24_contig00010586 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010586
         (715 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275906.2| PREDICTED: uncharacterized protein At5g41620...   162   8e-38
emb|CBI30346.3| unnamed protein product [Vitis vinifera]              162   8e-38
emb|CAN66060.1| hypothetical protein VITISV_017038 [Vitis vinifera]   161   1e-37
ref|XP_002309409.1| predicted protein [Populus trichocarpa] gi|2...   160   3e-37
ref|XP_002530519.1| conserved hypothetical protein [Ricinus comm...   156   3e-36

>ref|XP_002275906.2| PREDICTED: uncharacterized protein At5g41620-like [Vitis vinifera]
          Length = 693

 Score =  162 bits (409), Expect = 8e-38
 Identities = 101/190 (53%), Positives = 124/190 (65%), Gaps = 3/190 (1%)
 Frame = -1

Query: 562 MPRHHRNSLENLINGKCKIRKRGCXXXXXXXXSLVQPNYKLKRALLISKRGGSSTPVPRW 383
           MPR + + ++ LI GK  IRKRGC         L +  Y+ KRA+L+ KRGGSSTPVP W
Sbjct: 1   MPRQN-HGIQGLIPGK--IRKRGCSSSSSTSSVLQK--YRFKRAILVGKRGGSSTPVPTW 55

Query: 382 R-MSSKSPASVFKVPESPNHHPLMYNGK--QGPVSARKLAASLWEMNEMNSPRFKDNSGL 212
           R M+S+SPAS  +  ESP     M  GK  Q PVSARKLAA+LWEMNEM SPR  D    
Sbjct: 56  RLMNSRSPASAMRAMESPRS---MGGGKAKQAPVSARKLAATLWEMNEMPSPRADDEKRS 112

Query: 211 KRVKKERRRSVARSVQSGYLPQHLSDPSHSPVSERMERSGIGGSHYGRNSMYSQKVRVPG 32
           KR  + R R VARS+ SG LP HLSDPSHSPVSER++RSG   S+  + S  SQ++R+  
Sbjct: 113 KREVRGRER-VARSLHSGSLPPHLSDPSHSPVSERIDRSGT-SSYRRKTSSISQRLRLAD 170

Query: 31  RKIGGIDSIS 2
             +G +DS S
Sbjct: 171 HNVGVMDSFS 180


>emb|CBI30346.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  162 bits (409), Expect = 8e-38
 Identities = 101/190 (53%), Positives = 124/190 (65%), Gaps = 3/190 (1%)
 Frame = -1

Query: 562 MPRHHRNSLENLINGKCKIRKRGCXXXXXXXXSLVQPNYKLKRALLISKRGGSSTPVPRW 383
           MPR + + ++ LI GK  IRKRGC         L +  Y+ KRA+L+ KRGGSSTPVP W
Sbjct: 1   MPRQN-HGIQGLIPGK--IRKRGCSSSSSTSSVLQK--YRFKRAILVGKRGGSSTPVPTW 55

Query: 382 R-MSSKSPASVFKVPESPNHHPLMYNGK--QGPVSARKLAASLWEMNEMNSPRFKDNSGL 212
           R M+S+SPAS  +  ESP     M  GK  Q PVSARKLAA+LWEMNEM SPR  D    
Sbjct: 56  RLMNSRSPASAMRAMESPRS---MGGGKAKQAPVSARKLAATLWEMNEMPSPRADDEKRS 112

Query: 211 KRVKKERRRSVARSVQSGYLPQHLSDPSHSPVSERMERSGIGGSHYGRNSMYSQKVRVPG 32
           KR  + R R VARS+ SG LP HLSDPSHSPVSER++RSG   S+  + S  SQ++R+  
Sbjct: 113 KREVRGRER-VARSLHSGSLPPHLSDPSHSPVSERIDRSGT-SSYRRKTSSISQRLRLAD 170

Query: 31  RKIGGIDSIS 2
             +G +DS S
Sbjct: 171 HNVGVMDSFS 180


>emb|CAN66060.1| hypothetical protein VITISV_017038 [Vitis vinifera]
          Length = 577

 Score =  161 bits (408), Expect = 1e-37
 Identities = 101/190 (53%), Positives = 124/190 (65%), Gaps = 3/190 (1%)
 Frame = -1

Query: 562 MPRHHRNSLENLINGKCKIRKRGCXXXXXXXXSLVQPNYKLKRALLISKRGGSSTPVPRW 383
           MPR + + ++ LI GK  IRKRGC         L +  Y+ KRA+L+ KRGGSSTPVP W
Sbjct: 1   MPRQN-HGIQGLIPGK--IRKRGCSSSSSTSSVLQK--YRFKRAILVGKRGGSSTPVPTW 55

Query: 382 R-MSSKSPASVFKVPESPNHHPLMYNGK--QGPVSARKLAASLWEMNEMNSPRFKDNSGL 212
           R M+S+SPAS  +  ESP     M  GK  Q PVSARKLAA+LWEMNEM SPR  D    
Sbjct: 56  RLMNSRSPASAMRAMESPRS---MGGGKAKQAPVSARKLAATLWEMNEMPSPRADDEKRS 112

Query: 211 KRVKKERRRSVARSVQSGYLPQHLSDPSHSPVSERMERSGIGGSHYGRNSMYSQKVRVPG 32
           KR  + R R VARS+ SG LP HLSDPSHSPVSER++RSG   S+  + S  SQ++R+  
Sbjct: 113 KREVRGRER-VARSLHSGSLPPHLSDPSHSPVSERIDRSGT-SSYRRKTSSISQRLRLAD 170

Query: 31  RKIGGIDSIS 2
             +G +DS S
Sbjct: 171 HNVGVMDSXS 180


>ref|XP_002309409.1| predicted protein [Populus trichocarpa] gi|222855385|gb|EEE92932.1|
           predicted protein [Populus trichocarpa]
          Length = 667

 Score =  160 bits (404), Expect = 3e-37
 Identities = 99/194 (51%), Positives = 125/194 (64%), Gaps = 7/194 (3%)
 Frame = -1

Query: 562 MPRHHRNS-LENLINGKCKIRKRGCXXXXXXXXSLVQPNYKLKRALLISKRGGSSTPVPR 386
           MPR   ++ +E L+ GK  IRKR C        S++Q NY+ KRA+L+ KRGGSSTPVP 
Sbjct: 1   MPRQKGSATMEELLPGK--IRKRVCSSSASSSSSIIQ-NYRFKRAILVGKRGGSSTPVPT 57

Query: 385 WR-MSSKSPASVFKVPESPNHHPLMYNGK----QGPVSARKLAASLWEMNEMNSPRFKDN 221
           W+ M  ++P+S  +  ES    P   NGK    Q PVSARKLAA+LWEMNEM SP+ K+ 
Sbjct: 58  WKLMGKRTPSSTLRALESS---PKSLNGKAKQQQAPVSARKLAATLWEMNEMPSPQMKEE 114

Query: 220 S-GLKRVKKERRRSVARSVQSGYLPQHLSDPSHSPVSERMERSGIGGSHYGRNSMYSQKV 44
               +R++KE R    R V SG LP HLSDPSHSPVSER++RSG G  H  R S  SQK+
Sbjct: 115 IVEERRLRKEGRGRERRPVHSGSLPPHLSDPSHSPVSERIDRSGTGSCH-RRTSSISQKL 173

Query: 43  RVPGRKIGGIDSIS 2
           R+  + IG  DS+S
Sbjct: 174 RLMDQSIGAFDSVS 187


>ref|XP_002530519.1| conserved hypothetical protein [Ricinus communis]
           gi|223529923|gb|EEF31851.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 680

 Score =  156 bits (395), Expect = 3e-36
 Identities = 97/208 (46%), Positives = 129/208 (62%), Gaps = 21/208 (10%)
 Frame = -1

Query: 562 MPRHH--RNSLENLINGKCKIRKRGCXXXXXXXXSLVQPNYKLKRALLISKRGGSSTPVP 389
           MPR +  R S+E L+ GK  IRKRGC        S++Q NY+ KRA+L+  RGGS+TPVP
Sbjct: 1   MPRQNQSRASVEELLPGK--IRKRGCSSSASSSSSIIQ-NYRFKRAILVGNRGGSTTPVP 57

Query: 388 RWRM--SSKSPASVFKVPESPNHHPLMYNG-----------KQGPVSARKLAASLWEMNE 248
            WR+  ++++P+S  +  +SP +      G           +  PVSARKLAA+LWE+NE
Sbjct: 58  TWRLMGTTRTPSSALRARDSPKYAASQNGGIVKGKLMLQQQQAAPVSARKLAATLWELNE 117

Query: 247 MNSPRFKDNSG-----LKRVKKERRRS-VARSVQSGYLPQHLSDPSHSPVSERMERSGIG 86
           M SP+ K+  G     L+R  K R R+  ARSV SG LP HLSDPSHSPVSERM+RSG G
Sbjct: 118 MPSPKMKEVVGSEERRLRREGKGRERAGAARSVHSGSLPPHLSDPSHSPVSERMDRSGTG 177

Query: 85  GSHYGRNSMYSQKVRVPGRKIGGIDSIS 2
                R+S  SQ++R+    +G  D+IS
Sbjct: 178 SRR--RSSSISQRLRLTDYNVGAFDAIS 203


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