BLASTX nr result

ID: Coptis24_contig00010583 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010583
         (740 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532181.1| Iron-sulfur assembly protein IscA, chloropla...   208   1e-51
emb|CBI21524.3| unnamed protein product [Vitis vinifera]              207   2e-51
ref|XP_002279428.1| PREDICTED: iron-sulfur assembly protein IscA...   207   2e-51
ref|XP_004141965.1| PREDICTED: iron-sulfur assembly protein IscA...   206   4e-51
gb|AFK39059.1| unknown [Lotus japonicus]                              202   5e-50

>ref|XP_002532181.1| Iron-sulfur assembly protein IscA, chloroplast precursor, putative
           [Ricinus communis] gi|223528129|gb|EEF30199.1|
           Iron-sulfur assembly protein IscA, chloroplast
           precursor, putative [Ricinus communis]
          Length = 178

 Score =  208 bits (529), Expect = 1e-51
 Identities = 97/109 (88%), Positives = 105/109 (96%)
 Frame = +1

Query: 238 ISLTENALKHLNKMRSDKNEDLCLRIGVKQGGCSGMSYSMEFENRANARSDDSVMEYNGF 417
           IS+TENAL HLNKMR D++EDLCLRIGVKQGGCSGMSY+MEFENR+NAR DDSV+EYNGF
Sbjct: 70  ISVTENALNHLNKMRKDRDEDLCLRIGVKQGGCSGMSYTMEFENRSNARPDDSVIEYNGF 129

Query: 418 VIVCDPKSLLFVYGMQLDFSDALIGGGFSFKNPNATQTCGCGKSFTAEM 564
           VIVCDPKSLLFV+GMQLD+SDALIGGGFSFKNPNATQTCGCGKSF AEM
Sbjct: 130 VIVCDPKSLLFVFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAAEM 178


>emb|CBI21524.3| unnamed protein product [Vitis vinifera]
          Length = 150

 Score =  207 bits (527), Expect = 2e-51
 Identities = 97/109 (88%), Positives = 104/109 (95%)
 Frame = +1

Query: 238 ISLTENALKHLNKMRSDKNEDLCLRIGVKQGGCSGMSYSMEFENRANARSDDSVMEYNGF 417
           ISLT+NALKHLNKMRSD+ EDLCLRIGVKQGGCSGMSY+MEFE+RA  R DDS++EYNGF
Sbjct: 42  ISLTDNALKHLNKMRSDRTEDLCLRIGVKQGGCSGMSYTMEFEDRAKTRPDDSIIEYNGF 101

Query: 418 VIVCDPKSLLFVYGMQLDFSDALIGGGFSFKNPNATQTCGCGKSFTAEM 564
           VIVCDPKSLLFV+GMQLDFSDALIGGGFSFKNPNATQTCGCGKSF AEM
Sbjct: 102 VIVCDPKSLLFVFGMQLDFSDALIGGGFSFKNPNATQTCGCGKSFAAEM 150


>ref|XP_002279428.1| PREDICTED: iron-sulfur assembly protein IscA, chloroplastic-like
           [Vitis vinifera]
          Length = 173

 Score =  207 bits (527), Expect = 2e-51
 Identities = 97/109 (88%), Positives = 104/109 (95%)
 Frame = +1

Query: 238 ISLTENALKHLNKMRSDKNEDLCLRIGVKQGGCSGMSYSMEFENRANARSDDSVMEYNGF 417
           ISLT+NALKHLNKMRSD+ EDLCLRIGVKQGGCSGMSY+MEFE+RA  R DDS++EYNGF
Sbjct: 65  ISLTDNALKHLNKMRSDRTEDLCLRIGVKQGGCSGMSYTMEFEDRAKTRPDDSIIEYNGF 124

Query: 418 VIVCDPKSLLFVYGMQLDFSDALIGGGFSFKNPNATQTCGCGKSFTAEM 564
           VIVCDPKSLLFV+GMQLDFSDALIGGGFSFKNPNATQTCGCGKSF AEM
Sbjct: 125 VIVCDPKSLLFVFGMQLDFSDALIGGGFSFKNPNATQTCGCGKSFAAEM 173


>ref|XP_004141965.1| PREDICTED: iron-sulfur assembly protein IscA, chloroplastic-like
           [Cucumis sativus] gi|449515823|ref|XP_004164947.1|
           PREDICTED: iron-sulfur assembly protein IscA,
           chloroplastic-like [Cucumis sativus]
          Length = 174

 Score =  206 bits (524), Expect = 4e-51
 Identities = 95/109 (87%), Positives = 106/109 (97%)
 Frame = +1

Query: 238 ISLTENALKHLNKMRSDKNEDLCLRIGVKQGGCSGMSYSMEFENRANARSDDSVMEYNGF 417
           ISLT+ ALKHLNKMRS++NEDLCLRIGV+QGGCSGMSY+MEFE+RANAR DDS++EYNGF
Sbjct: 66  ISLTDTALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFESRANARPDDSIIEYNGF 125

Query: 418 VIVCDPKSLLFVYGMQLDFSDALIGGGFSFKNPNATQTCGCGKSFTAEM 564
           VIVCDPKSLLF++GMQLD+SDALIGGGFSFKNPNATQTCGCGKSF AEM
Sbjct: 126 VIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFNAEM 174


>gb|AFK39059.1| unknown [Lotus japonicus]
          Length = 169

 Score =  202 bits (515), Expect = 5e-50
 Identities = 92/109 (84%), Positives = 104/109 (95%)
 Frame = +1

Query: 238 ISLTENALKHLNKMRSDKNEDLCLRIGVKQGGCSGMSYSMEFENRANARSDDSVMEYNGF 417
           +SLT+ ALKHLN+MRS+KN+DLCLRIGVKQGGCSGMSYSM+FE+RAN R DDS++EY GF
Sbjct: 61  VSLTDQALKHLNRMRSEKNQDLCLRIGVKQGGCSGMSYSMDFEDRANTRPDDSIIEYEGF 120

Query: 418 VIVCDPKSLLFVYGMQLDFSDALIGGGFSFKNPNATQTCGCGKSFTAEM 564
           VIVCDPKSLLF++GMQLD+SDALIGGGFSFKNPNATQTCGCGKSF AEM
Sbjct: 121 VIVCDPKSLLFIFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAAEM 169


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