BLASTX nr result

ID: Coptis24_contig00010580 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010580
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298584.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
ref|XP_002526938.1| hypothetical protein RCOM_0530890 [Ricinus c...    60   1e-07
ref|XP_002870685.1| hypothetical protein ARALYDRAFT_493913 [Arab...    59   4e-07
ref|NP_198885.1| uncharacterized protein [Arabidopsis thaliana] ...    58   7e-07
dbj|BAF00498.1| hypothetical protein [Arabidopsis thaliana]            58   7e-07

>ref|XP_002298584.1| predicted protein [Populus trichocarpa] gi|222845842|gb|EEE83389.1|
           predicted protein [Populus trichocarpa]
          Length = 120

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 24/41 (58%), Positives = 34/41 (82%)
 Frame = +1

Query: 91  SRPTNHSKFTGKCDRAKGIRYYVHPTCKSKDKGKGTYKIRS 213
           S+PTNHSKFTGKC + +    ++HP+CKSKDK KG++K++S
Sbjct: 47  SKPTNHSKFTGKCSKPRCTGCHMHPSCKSKDKTKGSHKVKS 87


>ref|XP_002526938.1| hypothetical protein RCOM_0530890 [Ricinus communis]
           gi|223533690|gb|EEF35425.1| hypothetical protein
           RCOM_0530890 [Ricinus communis]
          Length = 180

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/45 (57%), Positives = 34/45 (75%)
 Frame = +1

Query: 79  TPLTSRPTNHSKFTGKCDRAKGIRYYVHPTCKSKDKGKGTYKIRS 213
           T +  RPTNHSKFTGKC + +    ++HP+CKSKDK KGT K++S
Sbjct: 43  TKVLPRPTNHSKFTGKCGKPRCNGCHMHPSCKSKDKTKGTQKLKS 87


>ref|XP_002870685.1| hypothetical protein ARALYDRAFT_493913 [Arabidopsis lyrata subsp.
           lyrata] gi|297316521|gb|EFH46944.1| hypothetical protein
           ARALYDRAFT_493913 [Arabidopsis lyrata subsp. lyrata]
          Length = 213

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 26/45 (57%), Positives = 35/45 (77%)
 Frame = +1

Query: 79  TPLTSRPTNHSKFTGKCDRAKGIRYYVHPTCKSKDKGKGTYKIRS 213
           T +TS+PTNHSKFTGKC +A+ +  ++HP  KSK K KG+ K+RS
Sbjct: 43  TKVTSKPTNHSKFTGKCGQARCLDCHMHPITKSKAKTKGSSKVRS 87


>ref|NP_198885.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9758097|dbj|BAB08541.1| unnamed protein product
           [Arabidopsis thaliana] gi|94442475|gb|ABF19025.1|
           At5g40690 [Arabidopsis thaliana]
           gi|332007199|gb|AED94582.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 210

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 25/45 (55%), Positives = 35/45 (77%)
 Frame = +1

Query: 79  TPLTSRPTNHSKFTGKCDRAKGIRYYVHPTCKSKDKGKGTYKIRS 213
           T +TS+PTNHSKFTGKC +A+ +  ++HP  KSK K KG+ K+R+
Sbjct: 43  TKVTSKPTNHSKFTGKCGQARCLDCHMHPVTKSKAKTKGSSKVRT 87


>dbj|BAF00498.1| hypothetical protein [Arabidopsis thaliana]
          Length = 210

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 25/45 (55%), Positives = 35/45 (77%)
 Frame = +1

Query: 79  TPLTSRPTNHSKFTGKCDRAKGIRYYVHPTCKSKDKGKGTYKIRS 213
           T +TS+PTNHSKFTGKC +A+ +  ++HP  KSK K KG+ K+R+
Sbjct: 43  TKVTSKPTNHSKFTGKCGQARCLDCHMHPVTKSKAKTKGSSKVRT 87


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