BLASTX nr result

ID: Coptis24_contig00010574 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010574
         (754 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267731.1| PREDICTED: B3 domain-containing protein Os04...   127   2e-27
emb|CAN73443.1| hypothetical protein VITISV_020729 [Vitis vinifera]   127   3e-27
emb|CBI39994.3| unnamed protein product [Vitis vinifera]              124   2e-26
ref|NP_001142732.1| uncharacterized protein LOC100275071 [Zea ma...   108   1e-21
ref|XP_003581144.1| PREDICTED: B3 domain-containing protein Os04...   103   4e-20

>ref|XP_002267731.1| PREDICTED: B3 domain-containing protein Os04g0386900 [Vitis
           vinifera]
          Length = 191

 Score =  127 bits (320), Expect = 2e-27
 Identities = 62/121 (51%), Positives = 82/121 (67%)
 Frame = -3

Query: 515 KQYFHCILSKSHVLKNYLMVLPVKISRVLPQAVVPVVLTCRNKIWKMNYLGEGSSHKRFD 336
           K YFH +L KSH+ +   MVLP K+   +P AV+P VL  ++K W+M + G+  +HKRFD
Sbjct: 74  KPYFHVVLVKSHLNQ---MVLPTKMHPSVPSAVIPAVLVHQDKRWEMTFNGDHRTHKRFD 130

Query: 335 SGWKNFVVDNKLKVGDGCVFELTECTTDCIKFRVQFLDGELPPNFADRVDGKSSASPIVI 156
            GW+ FV DN LK GD CVFEL EC T  IKFRVQ L G++P    DR +G++S + IVI
Sbjct: 131 IGWRTFVNDNNLKAGDACVFELMECNTSNIKFRVQILRGDIPSMLLDRANGETSDTAIVI 190

Query: 155 D 153
           +
Sbjct: 191 E 191


>emb|CAN73443.1| hypothetical protein VITISV_020729 [Vitis vinifera]
          Length = 160

 Score =  127 bits (318), Expect = 3e-27
 Identities = 62/121 (51%), Positives = 81/121 (66%)
 Frame = -3

Query: 515 KQYFHCILSKSHVLKNYLMVLPVKISRVLPQAVVPVVLTCRNKIWKMNYLGEGSSHKRFD 336
           K YFH +L KSH+ +   MVLP K+   +P AV+P VL  + K W+M + G+  +HKRFD
Sbjct: 43  KPYFHVVLVKSHLNQ---MVLPTKMHPSVPSAVIPAVLVHQXKRWEMTFNGDHRTHKRFD 99

Query: 335 SGWKNFVVDNKLKVGDGCVFELTECTTDCIKFRVQFLDGELPPNFADRVDGKSSASPIVI 156
            GW+ FV DN LK GD CVFEL EC T  IKFRVQ L G++P    DR +G++S + IVI
Sbjct: 100 IGWRTFVNDNNLKAGDACVFELMECNTSNIKFRVQILRGDIPSMLLDRANGETSDTAIVI 159

Query: 155 D 153
           +
Sbjct: 160 E 160


>emb|CBI39994.3| unnamed protein product [Vitis vinifera]
          Length = 210

 Score =  124 bits (312), Expect = 2e-26
 Identities = 61/126 (48%), Positives = 84/126 (66%)
 Frame = -3

Query: 515 KQYFHCILSKSHVLKNYLMVLPVKISRVLPQAVVPVVLTCRNKIWKMNYLGEGSSHKRFD 336
           K YFH +L KSH+ +   MVLP K+   +P AV+P VL  ++K W+M + G+  +HKRFD
Sbjct: 74  KPYFHVVLVKSHLNQ---MVLPTKMHPSVPSAVIPAVLVHQDKRWEMTFNGDHRTHKRFD 130

Query: 335 SGWKNFVVDNKLKVGDGCVFELTECTTDCIKFRVQFLDGELPPNFADRVDGKSSASPIVI 156
            GW+ FV DN LK GD CVFEL EC T  IKFRVQ L G++P    DR +G++S + I+ 
Sbjct: 131 IGWRTFVNDNNLKAGDACVFELMECNTSNIKFRVQILRGDIPSMLLDRANGETSDTAILK 190

Query: 155 D*VSWI 138
             +S++
Sbjct: 191 FVISFV 196


>ref|NP_001142732.1| uncharacterized protein LOC100275071 [Zea mays]
           gi|195608904|gb|ACG26282.1| hypothetical protein [Zea
           mays] gi|413918129|gb|AFW58061.1| hypothetical protein
           ZEAMMB73_242659 [Zea mays]
          Length = 159

 Score =  108 bits (270), Expect = 1e-21
 Identities = 51/121 (42%), Positives = 76/121 (62%)
 Frame = -3

Query: 515 KQYFHCILSKSHVLKNYLMVLPVKISRVLPQAVVPVVLTCRNKIWKMNYLGEGSSHKRFD 336
           K YF CIL KSHV + + +V+P  ++  LP   VP  +T   + W+M + G G   +R +
Sbjct: 40  KPYFTCILCKSHVNQPFQVVVPKSLAPFLPGTTVPATVTWHGRSWEMRFTG-GRQIQRLE 98

Query: 335 SGWKNFVVDNKLKVGDGCVFELTECTTDCIKFRVQFLDGELPPNFADRVDGKSSASPIVI 156
           +GW+ F +DN LK+GDGCVFEL +   + + FRVQ L  ++P    +R  G +S+SPI+I
Sbjct: 99  AGWRGFALDNGLKLGDGCVFELVDGRAERVVFRVQVLRADIPAEIRERAGGYTSSSPILI 158

Query: 155 D 153
           D
Sbjct: 159 D 159


>ref|XP_003581144.1| PREDICTED: B3 domain-containing protein Os04g0386900-like
           [Brachypodium distachyon]
          Length = 214

 Score =  103 bits (257), Expect = 4e-20
 Identities = 48/121 (39%), Positives = 75/121 (61%)
 Frame = -3

Query: 515 KQYFHCILSKSHVLKNYLMVLPVKISRVLPQAVVPVVLTCRNKIWKMNYLGEGSSHKRFD 336
           K YF C++ +SH+   + +V+P  ++  LP    P  LT + + W+M + G G   +R D
Sbjct: 93  KPYFACVVCRSHIQPPFQVVVPRSLAPFLPPKPAPATLTWQGRSWEMRFTG-GRPIQRLD 151

Query: 335 SGWKNFVVDNKLKVGDGCVFELTECTTDCIKFRVQFLDGELPPNFADRVDGKSSASPIVI 156
           +GW++F VDN L++GDGCVFEL     + + F+VQ L  E+P    +R  G +S+SPIVI
Sbjct: 152 AGWRSFAVDNALRLGDGCVFELVSGEGEGVVFQVQVLRAEIPARIRERAGGYNSSSPIVI 211

Query: 155 D 153
           +
Sbjct: 212 E 212


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