BLASTX nr result

ID: Coptis24_contig00010573 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010573
         (679 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282170.1| PREDICTED: uncharacterized protein LOC100247...   244   1e-62
ref|XP_002314701.1| predicted protein [Populus trichocarpa] gi|2...   243   3e-62
emb|CAN68227.1| hypothetical protein VITISV_040534 [Vitis vinifera]   238   8e-61
ref|XP_002517149.1| transporter, putative [Ricinus communis] gi|...   234   9e-60
ref|XP_002312528.1| predicted protein [Populus trichocarpa] gi|2...   234   9e-60

>ref|XP_002282170.1| PREDICTED: uncharacterized protein LOC100247799 [Vitis vinifera]
           gi|297737041|emb|CBI26242.3| unnamed protein product
           [Vitis vinifera]
          Length = 423

 Score =  244 bits (623), Expect = 1e-62
 Identities = 120/154 (77%), Positives = 138/154 (89%)
 Frame = +1

Query: 217 MGKKDGNNIQKENKDKEKVESVLQLLSKQAPLSVKQEKFCNTACVERFLKAKGDNVKKAS 396
           MGKKD        K+KE+VE+VL+LL KQAPL+VKQEKFCN ACVERFL+AKGD+V+KA+
Sbjct: 1   MGKKD-------QKEKERVEAVLELLRKQAPLTVKQEKFCNNACVERFLRAKGDSVRKAA 53

Query: 397 KQLRACLSWRESIGTEHLIADEFSAEISEGVAYVSGFDDDSRPVLVFRIKQDYQKFHSQK 576
           K LRACLSWRESIGTEHLIADEFSAE++EGVAYV+G D++SRPV++FRIKQDYQKFHSQK
Sbjct: 54  KHLRACLSWRESIGTEHLIADEFSAELAEGVAYVAGHDEESRPVMIFRIKQDYQKFHSQK 113

Query: 577 LYIRLLVFTLEVAIAAMPRNVEQFVILFDASFFR 678
           L+ RLLVFTLEVAI  MPRNVEQFV+LFDA FFR
Sbjct: 114 LFTRLLVFTLEVAIQTMPRNVEQFVLLFDAGFFR 147


>ref|XP_002314701.1| predicted protein [Populus trichocarpa] gi|222863741|gb|EEF00872.1|
           predicted protein [Populus trichocarpa]
          Length = 427

 Score =  243 bits (619), Expect = 3e-62
 Identities = 119/155 (76%), Positives = 139/155 (89%), Gaps = 1/155 (0%)
 Frame = +1

Query: 217 MGKKDGN-NIQKENKDKEKVESVLQLLSKQAPLSVKQEKFCNTACVERFLKAKGDNVKKA 393
           MGKK+     QK++KD ++ E+VL+LL K APL+VKQEKFCN ACVERFL+AKGDNVKKA
Sbjct: 1   MGKKEQQLQPQKDHKDNDRGEAVLELLRKHAPLTVKQEKFCNNACVERFLRAKGDNVKKA 60

Query: 394 SKQLRACLSWRESIGTEHLIADEFSAEISEGVAYVSGFDDDSRPVLVFRIKQDYQKFHSQ 573
           +K LRACLSWRESIGTE+LIADEFSAE++EGVAYV+G D++SRPV++FRIKQDYQKFHSQ
Sbjct: 61  AKHLRACLSWRESIGTENLIADEFSAELAEGVAYVAGHDEESRPVMIFRIKQDYQKFHSQ 120

Query: 574 KLYIRLLVFTLEVAIAAMPRNVEQFVILFDASFFR 678
           KL+ RLLVFTLEVAI  MPRN EQFV+LFDASFFR
Sbjct: 121 KLFTRLLVFTLEVAIGTMPRNAEQFVLLFDASFFR 155


>emb|CAN68227.1| hypothetical protein VITISV_040534 [Vitis vinifera]
          Length = 465

 Score =  238 bits (607), Expect = 8e-61
 Identities = 117/151 (77%), Positives = 136/151 (90%)
 Frame = +1

Query: 217 MGKKDGNNIQKENKDKEKVESVLQLLSKQAPLSVKQEKFCNTACVERFLKAKGDNVKKAS 396
           MGKKD        K+KE+VE+VL+LL KQAPL+VKQEKFCN ACVERFL+AKGD+V+KA+
Sbjct: 1   MGKKD-------QKEKERVEAVLELLRKQAPLTVKQEKFCNNACVERFLRAKGDSVRKAA 53

Query: 397 KQLRACLSWRESIGTEHLIADEFSAEISEGVAYVSGFDDDSRPVLVFRIKQDYQKFHSQK 576
           K LRACLSWRESIGTEHLIADEFSAE++EGVAYV+G D++SRPV++FRIKQDYQKFHSQK
Sbjct: 54  KHLRACLSWRESIGTEHLIADEFSAELAEGVAYVAGHDEESRPVMIFRIKQDYQKFHSQK 113

Query: 577 LYIRLLVFTLEVAIAAMPRNVEQFVILFDAS 669
           L+ RLLVFTLEVAI  MPRNVEQFV+LFDA+
Sbjct: 114 LFTRLLVFTLEVAIQTMPRNVEQFVLLFDAA 144


>ref|XP_002517149.1| transporter, putative [Ricinus communis]
           gi|223543784|gb|EEF45312.1| transporter, putative
           [Ricinus communis]
          Length = 434

 Score =  234 bits (598), Expect = 9e-60
 Identities = 115/158 (72%), Positives = 136/158 (86%), Gaps = 4/158 (2%)
 Frame = +1

Query: 217 MGKKDGNNIQKEN----KDKEKVESVLQLLSKQAPLSVKQEKFCNTACVERFLKAKGDNV 384
           MGKK+    Q++      + E+VE+ L +L KQ+PL+VKQEKFCN AC+ERFL+AKGDNV
Sbjct: 1   MGKKEQQQQQQQKDHNGNNNERVEAALDILRKQSPLTVKQEKFCNNACIERFLRAKGDNV 60

Query: 385 KKASKQLRACLSWRESIGTEHLIADEFSAEISEGVAYVSGFDDDSRPVLVFRIKQDYQKF 564
           KKA+K LRACLSWRESIGTE LIADEFSAE++EGVAYV+G D++SRPV++FRIKQDY KF
Sbjct: 61  KKAAKHLRACLSWRESIGTEQLIADEFSAELAEGVAYVAGHDEESRPVIIFRIKQDYLKF 120

Query: 565 HSQKLYIRLLVFTLEVAIAAMPRNVEQFVILFDASFFR 678
           HSQKL  RLLVFTLEVAIA MP+N+EQFVILFDASFFR
Sbjct: 121 HSQKLLTRLLVFTLEVAIATMPKNIEQFVILFDASFFR 158


>ref|XP_002312528.1| predicted protein [Populus trichocarpa] gi|222852348|gb|EEE89895.1|
           predicted protein [Populus trichocarpa]
          Length = 429

 Score =  234 bits (598), Expect = 9e-60
 Identities = 115/157 (73%), Positives = 138/157 (87%), Gaps = 3/157 (1%)
 Frame = +1

Query: 217 MGKKDG---NNIQKENKDKEKVESVLQLLSKQAPLSVKQEKFCNTACVERFLKAKGDNVK 387
           MGKK+       QK+++D ++VE+VL+LL KQA L+VKQEKFCN ACVERFL+AKGD+VK
Sbjct: 1   MGKKEQYQQQQRQKDHRDNDRVEAVLKLLRKQATLTVKQEKFCNNACVERFLRAKGDSVK 60

Query: 388 KASKQLRACLSWRESIGTEHLIADEFSAEISEGVAYVSGFDDDSRPVLVFRIKQDYQKFH 567
           KA+K LRACLSWRES GTE+LIADEFSAE++EGVAYV+G D++SRPV++FRIKQDYQK H
Sbjct: 61  KAAKHLRACLSWRESTGTENLIADEFSAELAEGVAYVAGHDEESRPVMIFRIKQDYQKLH 120

Query: 568 SQKLYIRLLVFTLEVAIAAMPRNVEQFVILFDASFFR 678
           SQKL+ RLLVFTLEVAI  MP+N EQFV+LFDASFFR
Sbjct: 121 SQKLFARLLVFTLEVAIGTMPKNAEQFVLLFDASFFR 157


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