BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010570
         (1030 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279473.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B...   212   1e-52
ref|XP_002509838.1| zinc finger protein, putative [Ricinus commu...   204   3e-50
ref|XP_002278353.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B...   197   5e-48
gb|AFK46654.1| unknown [Lotus japonicus]                              192   1e-46
gb|AFK38566.1| unknown [Medicago truncatula]                          189   1e-45

>ref|XP_002279473.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Vitis vinifera]
          Length = 168

 Score =  212 bits (539), Expect = 1e-52
 Identities = 107/169 (63%), Positives = 120/169 (71%), Gaps = 1/169 (0%)
 Frame = +3

Query: 42  MGFPVGYTEXXXXXXXXXXXXXXGYVRKLISWLFQALGLGDFLESDIAWXXXXXXXXXTT 221
           MGFPVGYTE              G++RKLIS+ F+ LGL DFLE DI W           
Sbjct: 1   MGFPVGYTELLLPKLLLHTLSLLGFIRKLISYFFRFLGLTDFLEPDIVWTE--------- 51

Query: 222 YGNNSHVSEFHSVSAVLIREFLPVVKYQDLDCCDTLIP-DSCAVCLYEFEGKEEIRRLTN 398
              ++ V EF SVSAVLIRE LPV+K+++L       P D CAVCLYEFEG+EEIRRLTN
Sbjct: 52  --GSTQVPEFQSVSAVLIREILPVMKFEELVGAGAGDPPDQCAVCLYEFEGQEEIRRLTN 109

Query: 399 CRHIFHRICLDRWMDHDQSTCPLCRTPFIPDDMQESFNERLWAASAVPD 545
           CRHIFHR CLDRWMD DQ TCPLCRTPFIPDDMQE+FNERLWAASA+PD
Sbjct: 110 CRHIFHRSCLDRWMDCDQKTCPLCRTPFIPDDMQEAFNERLWAASALPD 158


>ref|XP_002509838.1| zinc finger protein, putative [Ricinus communis]
           gi|223549737|gb|EEF51225.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 164

 Score =  204 bits (519), Expect = 3e-50
 Identities = 103/168 (61%), Positives = 116/168 (69%)
 Frame = +3

Query: 42  MGFPVGYTEXXXXXXXXXXXXXXGYVRKLISWLFQALGLGDFLESDIAWXXXXXXXXXTT 221
           MGFPVGYTE              G++RKLI+ LF+ LGL DFLE DI+W           
Sbjct: 1   MGFPVGYTELLLPKLLIHTLSILGFIRKLINTLFRYLGLPDFLEPDISWPETP------- 53

Query: 222 YGNNSHVSEFHSVSAVLIREFLPVVKYQDLDCCDTLIPDSCAVCLYEFEGKEEIRRLTNC 401
               S V EF+S SAVLIRE LPVVK+ DL       PDSCAVCLYEFE  +EIRRLTNC
Sbjct: 54  ----SRVPEFYSASAVLIREILPVVKFSDL----VDPPDSCAVCLYEFEDHDEIRRLTNC 105

Query: 402 RHIFHRICLDRWMDHDQSTCPLCRTPFIPDDMQESFNERLWAASAVPD 545
           RHIFH+ CLDRW+ +DQ TCPLCRTP IPDDMQE+FNERLWAAS +PD
Sbjct: 106 RHIFHKACLDRWVGYDQKTCPLCRTPVIPDDMQEAFNERLWAASGIPD 153


>ref|XP_002278353.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B [Vitis vinifera]
          Length = 167

 Score =  197 bits (500), Expect = 5e-48
 Identities = 96/168 (57%), Positives = 114/168 (67%)
 Frame = +3

Query: 42  MGFPVGYTEXXXXXXXXXXXXXXGYVRKLISWLFQALGLGDFLESDIAWXXXXXXXXXTT 221
           MGFPVGYTE              G++RKLI  LF  LGL DFLE+D++W           
Sbjct: 1   MGFPVGYTEVFLPKLFLHTLSFLGFIRKLIFSLFHFLGLSDFLETDVSWSE--------- 51

Query: 222 YGNNSHVSEFHSVSAVLIREFLPVVKYQDLDCCDTLIPDSCAVCLYEFEGKEEIRRLTNC 401
               + V E+  VSAVLIRE LPV+K+ +  C     P+SCAVCLY+FE  EEIRRLTNC
Sbjct: 52  --TQAQVPEYPPVSAVLIREILPVMKFGEAVCGGDA-PESCAVCLYDFEVGEEIRRLTNC 108

Query: 402 RHIFHRICLDRWMDHDQSTCPLCRTPFIPDDMQESFNERLWAASAVPD 545
           +HIFHR CLDRWMDHDQ TCPLCRTPF+PD+MQ+ FN+RLWAAS + D
Sbjct: 109 KHIFHRSCLDRWMDHDQKTCPLCRTPFVPDEMQDEFNQRLWAASGITD 156


>gb|AFK46654.1| unknown [Lotus japonicus]
          Length = 167

 Score =  192 bits (487), Expect = 1e-46
 Identities = 95/168 (56%), Positives = 114/168 (67%)
 Frame = +3

Query: 42  MGFPVGYTEXXXXXXXXXXXXXXGYVRKLISWLFQALGLGDFLESDIAWXXXXXXXXXTT 221
           MGFPVGYTE              G++RKL+  LF+ LGL DFLE DI W           
Sbjct: 1   MGFPVGYTEFLFPKLVLQILSLLGFIRKLVCTLFRYLGLPDFLEPDIVWPD--------- 51

Query: 222 YGNNSHVSEFHSVSAVLIREFLPVVKYQDLDCCDTLIPDSCAVCLYEFEGKEEIRRLTNC 401
             N++ + EF SVSA+LIRE LPVVK+++L       P+SC VCL EFE  +EIRRL NC
Sbjct: 52  --NSTRIPEFESVSALLIREILPVVKFREL----VDPPESCVVCLSEFEESDEIRRLANC 105

Query: 402 RHIFHRICLDRWMDHDQSTCPLCRTPFIPDDMQESFNERLWAASAVPD 545
           RHIFHR CLDRW+ +DQSTCPLCRTP IPD+MQ +FNERLWAAS +P+
Sbjct: 106 RHIFHRACLDRWVGYDQSTCPLCRTPLIPDEMQGAFNERLWAASGIPE 153


>gb|AFK38566.1| unknown [Medicago truncatula]
          Length = 163

 Score =  189 bits (479), Expect = 1e-45
 Identities = 93/168 (55%), Positives = 114/168 (67%)
 Frame = +3

Query: 42  MGFPVGYTEXXXXXXXXXXXXXXGYVRKLISWLFQALGLGDFLESDIAWXXXXXXXXXTT 221
           MGFPVGYTE               ++RKLI+ +F+ +GL DF+E DI W           
Sbjct: 1   MGFPVGYTELLFPKLVLHLLSIFTFIRKLINTIFRYMGLPDFIEPDIIWPE--------- 51

Query: 222 YGNNSHVSEFHSVSAVLIREFLPVVKYQDLDCCDTLIPDSCAVCLYEFEGKEEIRRLTNC 401
             N++ + EF SVSA+LIRE LPVVK+ +L       P+SCAVCL EFE  +EIRRL NC
Sbjct: 52  --NSTRIPEFESVSALLIREILPVVKFMEL----VDPPESCAVCLTEFEENDEIRRLANC 105

Query: 402 RHIFHRICLDRWMDHDQSTCPLCRTPFIPDDMQESFNERLWAASAVPD 545
           RHIFHR CLDRWM +DQ TCPLCRTPFIPD++Q +FNERLWAAS +P+
Sbjct: 106 RHIFHRGCLDRWMGYDQRTCPLCRTPFIPDELQSAFNERLWAASGIPE 153