BLASTX nr result

ID: Coptis24_contig00010566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010566
         (1208 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635085.1| PREDICTED: thioredoxin-like protein HCF164, ...   330   3e-88
ref|XP_003517272.1| PREDICTED: thioredoxin-like protein HCF164, ...   325   2e-86
ref|XP_002522379.1| Thiol:disulfide interchange protein txlA, pu...   318   2e-84
ref|XP_002310771.1| predicted protein [Populus trichocarpa] gi|2...   317   3e-84
ref|XP_004141943.1| PREDICTED: thioredoxin-like protein HCF164, ...   317   5e-84

>ref|XP_003635085.1| PREDICTED: thioredoxin-like protein HCF164, chloroplastic-like
           [Vitis vinifera] gi|298205068|emb|CBI38364.3| unnamed
           protein product [Vitis vinifera]
          Length = 264

 Score =  330 bits (847), Expect = 3e-88
 Identities = 170/262 (64%), Positives = 195/262 (74%), Gaps = 2/262 (0%)
 Frame = +1

Query: 100 MARVLSNPINLNRFQPSFQASFPRGRSASLPRQKN-IGGFRGNKLVCQTXXXXXXXXXXX 276
           M+RV S+P+ L+RF+P  QAS PR    +  +  N +  F+   + CQT           
Sbjct: 1   MSRVASSPVGLHRFRPCLQASQPRHVFKTHVQSPNRVTRFQNIAIACQTTPNPTPTDSST 60

Query: 277 XXXVSV-PDXXXXXXXXXXXXXXXAGSIEFPNRSINRKIALASTFAAVGLFLSTRLDFGV 453
                V P                 G  EFP++ INR+IA+ S+ AAVGLFLS RLDFGV
Sbjct: 61  TEKPPVEPGSVNDNVTQAASSSTDPGLPEFPSKDINRRIAVVSSLAAVGLFLSKRLDFGV 120

Query: 454 SLKDLSVAALPYEEALSNGRPTVVEFYADWCEVCRELAPDVYKVEQQYKDRVNFVMLNVD 633
           SLKDLS AALPYEEALSNG+PTVVEFYADWCEVCRELAPDVYKVEQQY+DRVNFVMLNVD
Sbjct: 121 SLKDLSAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQYRDRVNFVMLNVD 180

Query: 634 NTKWEQELDEFGVEGIPHFTFLDKEGNEEGNVVGRLPRKYLLENVDALAQGKASVPHARA 813
           NTKWEQELDEFGVEGIPHF FLDKEGNEEGNVVGRLP++Y  ENV+ALA G+AS+PHAR 
Sbjct: 181 NTKWEQELDEFGVEGIPHFAFLDKEGNEEGNVVGRLPKQYFQENVEALAHGEASIPHARV 240

Query: 814 VGQYTSAEARKVHRVTDPRSHG 879
           VGQY+SAE+RKVH+V DPRSHG
Sbjct: 241 VGQYSSAESRKVHQVVDPRSHG 262


>ref|XP_003517272.1| PREDICTED: thioredoxin-like protein HCF164, chloroplastic-like
           [Glycine max]
          Length = 252

 Score =  325 bits (832), Expect = 2e-86
 Identities = 174/262 (66%), Positives = 194/262 (74%), Gaps = 2/262 (0%)
 Frame = +1

Query: 100 MARVLS-NPINLNRFQPSFQASFPRGRSASLPRQKNIGGFRGNKLVCQTXXXXXXXXXXX 276
           MAR++S NPI L+RFQP    S  R  SA+  R++     +   L CQT           
Sbjct: 1   MARLISSNPIALHRFQPCLPIS--RHFSANPRRRRPTNTRKLQTLACQTNPNLDQK---- 54

Query: 277 XXXVSVPDXXXXXXXXXXXXXXXAGSI-EFPNRSINRKIALASTFAAVGLFLSTRLDFGV 453
                 P                  S+ + P ++IN KIAL ST AA+GLFLS RLDFGV
Sbjct: 55  ----DTPTTDEEKLVVEPSTSTTTSSLPQLPTKNINNKIALVSTLAALGLFLSARLDFGV 110

Query: 454 SLKDLSVAALPYEEALSNGRPTVVEFYADWCEVCRELAPDVYKVEQQYKDRVNFVMLNVD 633
           SLKDLS  A+PYEEALSNG+PTVVEFYADWCEVCRELAPDVYKVEQQ+KDRVNFVMLNVD
Sbjct: 111 SLKDLSANAMPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVD 170

Query: 634 NTKWEQELDEFGVEGIPHFTFLDKEGNEEGNVVGRLPRKYLLENVDALAQGKASVPHARA 813
           NTKWEQELDEFGVEGIPHF FLDKEGNEEGNVVGRLPR+YLLENVDALA+G+ASVPHAR 
Sbjct: 171 NTKWEQELDEFGVEGIPHFAFLDKEGNEEGNVVGRLPRQYLLENVDALARGEASVPHARV 230

Query: 814 VGQYTSAEARKVHRVTDPRSHG 879
           VGQY+SAEARKVH+V DPRSHG
Sbjct: 231 VGQYSSAEARKVHQVADPRSHG 252


>ref|XP_002522379.1| Thiol:disulfide interchange protein txlA, putative [Ricinus
           communis] gi|223538457|gb|EEF40063.1| Thiol:disulfide
           interchange protein txlA, putative [Ricinus communis]
          Length = 206

 Score =  318 bits (814), Expect = 2e-84
 Identities = 151/178 (84%), Positives = 165/178 (92%)
 Frame = +1

Query: 346 AGSIEFPNRSINRKIALASTFAAVGLFLSTRLDFGVSLKDLSVAALPYEEALSNGRPTVV 525
           +G  EFPN+ +N++I + S  AAVGLFLS RLDFGVSLKDLS AA+PYEEALSNG+PTVV
Sbjct: 29  SGLPEFPNKDVNKQIGVISVLAAVGLFLSARLDFGVSLKDLSAAAVPYEEALSNGKPTVV 88

Query: 526 EFYADWCEVCRELAPDVYKVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFTFLDK 705
           EFYADWCEVCRELAPDVYKVEQQ+KDRVNFVMLNVDNTKWEQELDEFGVEGIPHF FLDK
Sbjct: 89  EFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDK 148

Query: 706 EGNEEGNVVGRLPRKYLLENVDALAQGKASVPHARAVGQYTSAEARKVHRVTDPRSHG 879
           EGNEEGNVVGR PR+YLLENVDALA+GKASVPHAR VGQY+SAE+RKVH+V DPRSHG
Sbjct: 149 EGNEEGNVVGRFPRQYLLENVDALARGKASVPHARVVGQYSSAESRKVHQVVDPRSHG 206


>ref|XP_002310771.1| predicted protein [Populus trichocarpa] gi|222853674|gb|EEE91221.1|
           predicted protein [Populus trichocarpa]
          Length = 260

 Score =  317 bits (813), Expect = 3e-84
 Identities = 170/263 (64%), Positives = 193/263 (73%), Gaps = 3/263 (1%)
 Frame = +1

Query: 100 MARVLSNPINLNRFQPSFQASF--PRGRSASLPRQKNIGGFRGNKLVCQTXXXXXXXXXX 273
           MARV SNP+ ++RF+P  QAS   P    +++  Q     F    + CQT          
Sbjct: 1   MARVASNPLCIHRFRPYLQASHSSPSLLKSTVHYQTKPRKFPA--VSCQTNPDSSETSTP 58

Query: 274 XXXXVSVPDXXXXXXXXXXXXXXX-AGSIEFPNRSINRKIALASTFAAVGLFLSTRLDFG 450
               V  P                 +G  EFPN+ +N++IA+ S  AA GLFLS+RLDFG
Sbjct: 59  TEKEVLEPGPVSDDTKREDTGASQDSGLPEFPNKDVNKRIAVVSLLAAAGLFLSSRLDFG 118

Query: 451 VSLKDLSVAALPYEEALSNGRPTVVEFYADWCEVCRELAPDVYKVEQQYKDRVNFVMLNV 630
           VSLKDLSVAALPYEEALSNG+PTVVEFYADWCEVCRELAPDVYKVEQQYKDRVNFVMLNV
Sbjct: 119 VSLKDLSVAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQYKDRVNFVMLNV 178

Query: 631 DNTKWEQELDEFGVEGIPHFTFLDKEGNEEGNVVGRLPRKYLLENVDALAQGKASVPHAR 810
           DNTKWEQELDEFGVEGIPHF FLD+EGNEEGNVVGRLPRKYLLENV+ALA+G+ S+PHAR
Sbjct: 179 DNTKWEQELDEFGVEGIPHFAFLDREGNEEGNVVGRLPRKYLLENVEALARGEGSIPHAR 238

Query: 811 AVGQYTSAEARKVHRVTDPRSHG 879
            VGQY++AE RKV R  DPRSHG
Sbjct: 239 VVGQYSNAENRKV-RSVDPRSHG 260


>ref|XP_004141943.1| PREDICTED: thioredoxin-like protein HCF164, chloroplastic-like
           [Cucumis sativus] gi|449497723|ref|XP_004160496.1|
           PREDICTED: thioredoxin-like protein HCF164,
           chloroplastic-like [Cucumis sativus]
          Length = 259

 Score =  317 bits (811), Expect = 5e-84
 Identities = 165/260 (63%), Positives = 188/260 (72%), Gaps = 5/260 (1%)
 Frame = +1

Query: 115 SNPINLNRFQPSFQASFP-----RGRSASLPRQKNIGGFRGNKLVCQTXXXXXXXXXXXX 279
           SN I L+R    F+   P       R  S PR       R   L CQT            
Sbjct: 7   SNSIALHRIPLCFRIPHPLLQPSAARFPSSPR-------RFPPLACQTLPESHDTTSAPE 59

Query: 280 XXVSVPDXXXXXXXXXXXXXXXAGSIEFPNRSINRKIALASTFAAVGLFLSTRLDFGVSL 459
              + P+                G  EFPN+ INR++A+ ST +A+ LF S+RLDFGVSL
Sbjct: 60  KSSNGPESPGDTTGQAASSSSNQGFPEFPNKDINRRVAIVSTVSALALFSSSRLDFGVSL 119

Query: 460 KDLSVAALPYEEALSNGRPTVVEFYADWCEVCRELAPDVYKVEQQYKDRVNFVMLNVDNT 639
           KDL+ AALPYEEALSNG+PTVVEFYADWCEVCRELAPDVYKVEQQ+KDRVNFVMLNVDNT
Sbjct: 120 KDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNT 179

Query: 640 KWEQELDEFGVEGIPHFTFLDKEGNEEGNVVGRLPRKYLLENVDALAQGKASVPHARAVG 819
           KWEQELDEFGVEGIPHF FLDK+GNEEGNVVGRLPR+YLLENVDALA+G+AS+PHAR VG
Sbjct: 180 KWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVG 239

Query: 820 QYTSAEARKVHRVTDPRSHG 879
           Q++SAEARKVH+V+DPRSHG
Sbjct: 240 QFSSAEARKVHQVSDPRSHG 259


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