BLASTX nr result

ID: Coptis24_contig00010561 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010561
         (1192 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283530.1| PREDICTED: expansin-A4 [Vitis vinifera]           493   e-137
ref|XP_002266625.1| PREDICTED: expansin-A4 [Vitis vinifera] gi|1...   489   e-136
ref|XP_002315218.1| hypothetical protein POPTRDRAFT_770354 [Popu...   488   e-136
ref|XP_004143121.1| PREDICTED: expansin-A4-like [Cucumis sativus...   486   e-135
emb|CBI16120.3| unnamed protein product [Vitis vinifera]              485   e-134

>ref|XP_002283530.1| PREDICTED: expansin-A4 [Vitis vinifera]
          Length = 258

 Score =  493 bits (1269), Expect = e-137
 Identities = 225/258 (87%), Positives = 242/258 (93%)
 Frame = +3

Query: 54  MALLRAFCIISLISFLTLVEARIPGVYSGGAWESAHATFYGGSDASGTMGGACGYGNLYS 233
           MA+    C  SLIS  +LV+A+IPG YSGGAW+SAHATFYGGSDASGTMGGACGYGNLYS
Sbjct: 1   MAVGVVVCFASLISLFSLVQAKIPGAYSGGAWQSAHATFYGGSDASGTMGGACGYGNLYS 60

Query: 234 QGYGVNTAALSTALFNNGLSCGACFELKCANDPRWCHAGSPSILVTATNFCPPNFAQPSD 413
           QGYGVNTAALSTALFNNGLSCGACFELKCANDP WCH+GSPSIL+TATNFCPPN+A PSD
Sbjct: 61  QGYGVNTAALSTALFNNGLSCGACFELKCANDPTWCHSGSPSILITATNFCPPNYALPSD 120

Query: 414 NGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAFRRVPCRKLGGIRFTINGFRYFNLILV 593
           NGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAFRRVPCRK GGIRFTINGFRYFNL+L+
Sbjct: 121 NGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAFRRVPCRKQGGIRFTINGFRYFNLVLI 180

Query: 594 SNVAGAGDITRVMVKGTKTGWMTMSRNWGQNWQSNSILVGQALSFRVTGSDRRTSTSWNI 773
           +NVAGAGDI R  VKG+KTGWM++SRNWGQNWQSN++LVGQ+LSFRVTGSDRRTSTSWNI
Sbjct: 181 TNVAGAGDIVRASVKGSKTGWMSLSRNWGQNWQSNAVLVGQSLSFRVTGSDRRTSTSWNI 240

Query: 774 APAHWQFGQTFVGKNFRV 827
           APAHWQFGQTF GKNFRV
Sbjct: 241 APAHWQFGQTFSGKNFRV 258


>ref|XP_002266625.1| PREDICTED: expansin-A4 [Vitis vinifera]
           gi|147799039|emb|CAN65872.1| hypothetical protein
           VITISV_000251 [Vitis vinifera]
           gi|297740365|emb|CBI30547.3| unnamed protein product
           [Vitis vinifera]
          Length = 258

 Score =  489 bits (1259), Expect = e-136
 Identities = 222/258 (86%), Positives = 243/258 (94%)
 Frame = +3

Query: 54  MALLRAFCIISLISFLTLVEARIPGVYSGGAWESAHATFYGGSDASGTMGGACGYGNLYS 233
           MALL    + SL+SFLTLV ARIPGVY+ G WESAHATFYGGSDASGTMGGACGYGNLYS
Sbjct: 1   MALLTLLSLASLLSFLTLVHARIPGVYTSGPWESAHATFYGGSDASGTMGGACGYGNLYS 60

Query: 234 QGYGVNTAALSTALFNNGLSCGACFELKCANDPRWCHAGSPSILVTATNFCPPNFAQPSD 413
           QGYGVNTAALSTALFN+GLSCGACFE+KCANDP+WCH+GSPSI VTATNFCPPN+A PSD
Sbjct: 61  QGYGVNTAALSTALFNSGLSCGACFEIKCANDPKWCHSGSPSIFVTATNFCPPNYALPSD 120

Query: 414 NGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAFRRVPCRKLGGIRFTINGFRYFNLILV 593
           NGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAFRRV CRK GGIRFT+NGFRYFNL+LV
Sbjct: 121 NGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAFRRVSCRKSGGIRFTVNGFRYFNLVLV 180

Query: 594 SNVAGAGDITRVMVKGTKTGWMTMSRNWGQNWQSNSILVGQALSFRVTGSDRRTSTSWNI 773
           +NVAGAGDI RV +KG+KTGWM+MSRNWGQNWQSN++LVGQ+LSFRVTGSDRRTSTSWN+
Sbjct: 181 TNVAGAGDIVRVSIKGSKTGWMSMSRNWGQNWQSNAVLVGQSLSFRVTGSDRRTSTSWNV 240

Query: 774 APAHWQFGQTFVGKNFRV 827
           APA+WQFGQTF G+NFR+
Sbjct: 241 APANWQFGQTFSGRNFRI 258


>ref|XP_002315218.1| hypothetical protein POPTRDRAFT_770354 [Populus trichocarpa]
           gi|222864258|gb|EEF01389.1| hypothetical protein
           POPTRDRAFT_770354 [Populus trichocarpa]
          Length = 258

 Score =  488 bits (1257), Expect = e-136
 Identities = 219/258 (84%), Positives = 243/258 (94%)
 Frame = +3

Query: 54  MALLRAFCIISLISFLTLVEARIPGVYSGGAWESAHATFYGGSDASGTMGGACGYGNLYS 233
           MA+    C+ SL+ FLTLVEARIPGVY+GGAW+SAHATFYGGSDASGTMGGACGYGNLYS
Sbjct: 1   MAIRATICVASLVLFLTLVEARIPGVYTGGAWQSAHATFYGGSDASGTMGGACGYGNLYS 60

Query: 234 QGYGVNTAALSTALFNNGLSCGACFELKCANDPRWCHAGSPSILVTATNFCPPNFAQPSD 413
           QGYGVNTAALSTALFNNGLSCGACFE+KC NDP+WCH+GSPSIL+TATNFCPPN+A PSD
Sbjct: 61  QGYGVNTAALSTALFNNGLSCGACFEIKCGNDPQWCHSGSPSILITATNFCPPNYALPSD 120

Query: 414 NGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAFRRVPCRKLGGIRFTINGFRYFNLILV 593
           NGGWCNPPRPHFDLAMP+FLKIAEYRAGIVPV++RRVPCRK GGIRF ING RYFNL+L+
Sbjct: 121 NGGWCNPPRPHFDLAMPVFLKIAEYRAGIVPVSYRRVPCRKRGGIRFQINGHRYFNLVLI 180

Query: 594 SNVAGAGDITRVMVKGTKTGWMTMSRNWGQNWQSNSILVGQALSFRVTGSDRRTSTSWNI 773
           +NVAGAGDI +V VKG+KTGWM+MSRNWGQNWQSNS+LVGQ+LSFRVTGSDRRTSTSWN+
Sbjct: 181 TNVAGAGDIVKVSVKGSKTGWMSMSRNWGQNWQSNSVLVGQSLSFRVTGSDRRTSTSWNV 240

Query: 774 APAHWQFGQTFVGKNFRV 827
            P++WQF QTFVGKNFRV
Sbjct: 241 VPSNWQFSQTFVGKNFRV 258


>ref|XP_004143121.1| PREDICTED: expansin-A4-like [Cucumis sativus]
           gi|449518334|ref|XP_004166197.1| PREDICTED:
           expansin-A4-like [Cucumis sativus]
          Length = 258

 Score =  486 bits (1252), Expect = e-135
 Identities = 221/258 (85%), Positives = 241/258 (93%)
 Frame = +3

Query: 54  MALLRAFCIISLISFLTLVEARIPGVYSGGAWESAHATFYGGSDASGTMGGACGYGNLYS 233
           MA   + CI  L+SF  L+EARIPGVYSGG W+SAHATFYGGSDASGTMGGACGYGNLYS
Sbjct: 1   MATPFSLCIPLLLSFSLLIEARIPGVYSGGPWQSAHATFYGGSDASGTMGGACGYGNLYS 60

Query: 234 QGYGVNTAALSTALFNNGLSCGACFELKCANDPRWCHAGSPSILVTATNFCPPNFAQPSD 413
           QGYGVNTAALSTALFN G SCGACFE+KCANDPRWCH+GSPSIL+TATNFCPPN+A P+D
Sbjct: 61  QGYGVNTAALSTALFNKGQSCGACFEIKCANDPRWCHSGSPSILITATNFCPPNYALPND 120

Query: 414 NGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAFRRVPCRKLGGIRFTINGFRYFNLILV 593
           NGGWCNPPR HFDLAMPMFLKIAEYRAGIVPV++RRVPCRK GGIRFTINGFRYFNL+L+
Sbjct: 121 NGGWCNPPRSHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLI 180

Query: 594 SNVAGAGDITRVMVKGTKTGWMTMSRNWGQNWQSNSILVGQALSFRVTGSDRRTSTSWNI 773
           +NVAGAGDI RV VKGT+TGWM+++RNWGQNWQSN++LVGQALSFRVTGSDRRTSTSWNI
Sbjct: 181 TNVAGAGDIVRVSVKGTRTGWMSLTRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNI 240

Query: 774 APAHWQFGQTFVGKNFRV 827
           APAHWQFGQTF GKNFRV
Sbjct: 241 APAHWQFGQTFTGKNFRV 258


>emb|CBI16120.3| unnamed protein product [Vitis vinifera]
          Length = 277

 Score =  485 bits (1248), Expect = e-134
 Identities = 221/254 (87%), Positives = 238/254 (93%)
 Frame = +3

Query: 54  MALLRAFCIISLISFLTLVEARIPGVYSGGAWESAHATFYGGSDASGTMGGACGYGNLYS 233
           MA+    C  SLIS  +LV+A+IPG YSGGAW+SAHATFYGGSDASGTMGGACGYGNLYS
Sbjct: 1   MAVGVVVCFASLISLFSLVQAKIPGAYSGGAWQSAHATFYGGSDASGTMGGACGYGNLYS 60

Query: 234 QGYGVNTAALSTALFNNGLSCGACFELKCANDPRWCHAGSPSILVTATNFCPPNFAQPSD 413
           QGYGVNTAALSTALFNNGLSCGACFELKCANDP WCH+GSPSIL+TATNFCPPN+A PSD
Sbjct: 61  QGYGVNTAALSTALFNNGLSCGACFELKCANDPTWCHSGSPSILITATNFCPPNYALPSD 120

Query: 414 NGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAFRRVPCRKLGGIRFTINGFRYFNLILV 593
           NGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAFRRVPCRK GGIRFTINGFRYFNL+L+
Sbjct: 121 NGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAFRRVPCRKQGGIRFTINGFRYFNLVLI 180

Query: 594 SNVAGAGDITRVMVKGTKTGWMTMSRNWGQNWQSNSILVGQALSFRVTGSDRRTSTSWNI 773
           +NVAGAGDI R  VKG+KTGWM++SRNWGQNWQSN++LVGQ+LSFRVTGSDRRTSTSWNI
Sbjct: 181 TNVAGAGDIVRASVKGSKTGWMSLSRNWGQNWQSNAVLVGQSLSFRVTGSDRRTSTSWNI 240

Query: 774 APAHWQFGQTFVGK 815
           APAHWQFGQTF GK
Sbjct: 241 APAHWQFGQTFSGK 254


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