BLASTX nr result

ID: Coptis24_contig00010544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010544
         (1243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313979.1| predicted protein [Populus trichocarpa] gi|2...   339   8e-91
ref|XP_002278599.2| PREDICTED: uncharacterized protein LOC100260...   330   6e-88
ref|XP_002516645.1| protein binding protein, putative [Ricinus c...   327   4e-87
ref|XP_002298491.1| predicted protein [Populus trichocarpa] gi|2...   323   6e-86
emb|CBI15919.3| unnamed protein product [Vitis vinifera]              320   4e-85

>ref|XP_002313979.1| predicted protein [Populus trichocarpa] gi|222850387|gb|EEE87934.1|
           predicted protein [Populus trichocarpa]
          Length = 265

 Score =  339 bits (870), Expect = 8e-91
 Identities = 174/243 (71%), Positives = 205/243 (84%), Gaps = 1/243 (0%)
 Frame = -3

Query: 971 RPGGMLVQKRDDEGVGDLGPMIKIKLYYGSSVLDVNVPAQATFGDLKRILAHETGLEPKE 792
           RPGGMLVQKRD  GVG  GPMIKIK+ +GS   D +VPAQ+TFGDLK++LA+ETGLEP+E
Sbjct: 24  RPGGMLVQKRD-VGVGSSGPMIKIKVSHGSCHYDTDVPAQSTFGDLKKVLANETGLEPQE 82

Query: 791 QRLLFRGKEREDEECLHMVGVKDMSKVVLLEDPASRERKLEEMKKNQEISKACEPINKVR 612
           QRLLFRGKERE++E LHMVGVKDMSKV+L EDPAS+ERKLEEMK+NQ   +ACE + +VR
Sbjct: 83  QRLLFRGKERENDEYLHMVGVKDMSKVILFEDPASKERKLEEMKRNQGTFEACEAVARVR 142

Query: 611 AEVDRLAEKASILESAVRNGTKVDEKEFVVLTELLMVQLLKLDGIEAEGEARAQRRTEVR 432
           AEVD+L EK   LE+   +GT + +KEFVVLTELLM+QLLKLD IEA GEA+ QRR EVR
Sbjct: 143 AEVDKLCEKVVALETTFCSGTAIADKEFVVLTELLMIQLLKLDSIEANGEAKVQRRIEVR 202

Query: 431 RVQSLVETLDTLKARNSNPFSDSSNAVSVTTKWEKFDSGVGSLSAPPPV-SSSEATQDWE 255
           R+QS V+TLD LK RNSNPFS+SS+AVSVTTKWE F SGVGSLSAP P+ S+++ TQDWE
Sbjct: 203 RIQSFVDTLDNLKVRNSNPFSNSSSAVSVTTKWETFASGVGSLSAPVPIQSATKVTQDWE 262

Query: 254 SFD 246
            FD
Sbjct: 263 LFD 265


>ref|XP_002278599.2| PREDICTED: uncharacterized protein LOC100260376 [Vitis vinifera]
          Length = 264

 Score =  330 bits (845), Expect = 6e-88
 Identities = 172/243 (70%), Positives = 204/243 (83%), Gaps = 1/243 (0%)
 Frame = -3

Query: 971 RPGGMLVQKRDDEGVGDLGPMIKIKLYYGSSVLDVNVPAQATFGDLKRILAHETGLEPKE 792
           RPGGMLVQKR+  G     PMIKIK+ +GS    + +PAQ+TFGDLKR+LAHETGLEPKE
Sbjct: 23  RPGGMLVQKRN-AGDAASSPMIKIKVSHGSYHHYITIPAQSTFGDLKRVLAHETGLEPKE 81

Query: 791 QRLLFRGKEREDEECLHMVGVKDMSKVVLLEDPASRERKLEEMKKNQEISKACEPINKVR 612
           QRLLFRGKE+E++ECLHMVGVK+MSKV+LLEDPAS+E+KLEEMKK+Q I KA E +  VR
Sbjct: 82  QRLLFRGKEKENDECLHMVGVKEMSKVILLEDPASKEKKLEEMKKDQGILKAYEAVALVR 141

Query: 611 AEVDRLAEKASILESAVRNGTKVDEKEFVVLTELLMVQLLKLDGIEAEGEARAQRRTEVR 432
            EVD+L+EK   LE AVR G KV +KEFVVLTELLMVQLL+LD IEA+GEA+ QRR EV 
Sbjct: 142 VEVDKLSEKIVALERAVRGGNKVVDKEFVVLTELLMVQLLQLDTIEADGEAKVQRRIEVC 201

Query: 431 RVQSLVETLDTLKARNSNPFSDSSNAVSVTTKWEKFDSGVGSLSAPPPV-SSSEATQDWE 255
           R+QS V+TLD LKARNSNPF++S+NAVSVTTKW  F+SG+GSLSAP P+ SS++ TQDWE
Sbjct: 202 RIQSFVDTLDNLKARNSNPFNNSTNAVSVTTKWVAFESGIGSLSAPTPLQSSTKITQDWE 261

Query: 254 SFD 246
            FD
Sbjct: 262 LFD 264


>ref|XP_002516645.1| protein binding protein, putative [Ricinus communis]
           gi|223544217|gb|EEF45740.1| protein binding protein,
           putative [Ricinus communis]
          Length = 265

 Score =  327 bits (838), Expect = 4e-87
 Identities = 169/243 (69%), Positives = 199/243 (81%), Gaps = 1/243 (0%)
 Frame = -3

Query: 971 RPGGMLVQKRDDEGVGDLGPMIKIKLYYGSSVLDVNVPAQATFGDLKRILAHETGLEPKE 792
           RPGGMLVQKR+  G G  GPMIKIK+ +GS   +V VPAQ+TFGDLK++L HE GLE +E
Sbjct: 24  RPGGMLVQKRE-VGDGSSGPMIKIKVSHGSYHYEVTVPAQSTFGDLKKVLVHEAGLEAEE 82

Query: 791 QRLLFRGKEREDEECLHMVGVKDMSKVVLLEDPASRERKLEEMKKNQEISKACEPINKVR 612
           QRLLFRGKE+ED ECLHM GVKD+SKV+LLEDPA +ERKLEEMKKN+ I KACE + +VR
Sbjct: 83  QRLLFRGKEKEDNECLHMEGVKDLSKVILLEDPACKERKLEEMKKNEAILKACEAVARVR 142

Query: 611 AEVDRLAEKASILESAVRNGTKVDEKEFVVLTELLMVQLLKLDGIEAEGEARAQRRTEVR 432
           AEVD+L++K   LE+ V +GT V EKEF+VLTELLMVQLLKLD IEA+GEA+ QRR EVR
Sbjct: 143 AEVDKLSQKVVTLETTVSSGTLVAEKEFIVLTELLMVQLLKLDMIEADGEAKVQRRIEVR 202

Query: 431 RVQSLVETLDTLKARNSNPFSDSSNAVSVTTKWEKFDSGVGSLSAPPPV-SSSEATQDWE 255
           RVQS V+ LD LKARNSN  S+SSN VSVT KWE FDSGVGS+S P  + S+++ TQDWE
Sbjct: 203 RVQSFVDALDKLKARNSNTLSNSSNEVSVTAKWETFDSGVGSVSTPVSIQSATKVTQDWE 262

Query: 254 SFD 246
            FD
Sbjct: 263 LFD 265


>ref|XP_002298491.1| predicted protein [Populus trichocarpa] gi|222845749|gb|EEE83296.1|
           predicted protein [Populus trichocarpa]
          Length = 263

 Score =  323 bits (828), Expect = 6e-86
 Identities = 166/243 (68%), Positives = 200/243 (82%), Gaps = 1/243 (0%)
 Frame = -3

Query: 971 RPGGMLVQKRDDEGVGDLGPMIKIKLYYGSSVLDVNVPAQATFGDLKRILAHETGLEPKE 792
           RPGGMLVQK D  G G  GPMIKIK+ +G    D+ VPAQ+TFGDLK++LAHETGLE KE
Sbjct: 22  RPGGMLVQKMD-VGDGSSGPMIKIKVSHGLCHYDIAVPAQSTFGDLKKVLAHETGLESKE 80

Query: 791 QRLLFRGKEREDEECLHMVGVKDMSKVVLLEDPASRERKLEEMKKNQEISKACEPINKVR 612
           QRLLF+GKE+E++E LHMVGVKDMSKV+L EDPAS+ERKLEEMK+NQ+  KA E + +VR
Sbjct: 81  QRLLFKGKEKENDEYLHMVGVKDMSKVILFEDPASKERKLEEMKRNQDTLKAYEAVARVR 140

Query: 611 AEVDRLAEKASILESAVRNGTKVDEKEFVVLTELLMVQLLKLDGIEAEGEARAQRRTEVR 432
           AEVD+L EK   LE+ +R+GTK+ EKEF VLTELLM+QLLKLD IEA+G+A+ QR+ EVR
Sbjct: 141 AEVDKLCEKVVALETNIRSGTKIAEKEFSVLTELLMIQLLKLDSIEADGQAKVQRKIEVR 200

Query: 431 RVQSLVETLDTLKARNSNPFSDSSNAVSVTTKWEKFDSGVGSLSAPPPV-SSSEATQDWE 255
           R+QS V+TL+ LK RNS  FS +SNAVSVTTKWE F SGVGSLSAP P+ S+++  QDWE
Sbjct: 201 RIQSFVDTLENLKVRNSKSFSHNSNAVSVTTKWETFASGVGSLSAPVPLQSATKLNQDWE 260

Query: 254 SFD 246
            FD
Sbjct: 261 LFD 263


>emb|CBI15919.3| unnamed protein product [Vitis vinifera]
          Length = 238

 Score =  320 bits (821), Expect = 4e-85
 Identities = 168/239 (70%), Positives = 200/239 (83%), Gaps = 1/239 (0%)
 Frame = -3

Query: 959 MLVQKRDDEGVGDLGPMIKIKLYYGSSVLDVNVPAQATFGDLKRILAHETGLEPKEQRLL 780
           MLVQKR+  G     PMIKIK+ +GS    + +PAQ+TFGDLKR+LAHETGLEPKEQRLL
Sbjct: 1   MLVQKRN-AGDAASSPMIKIKVSHGSYHHYITIPAQSTFGDLKRVLAHETGLEPKEQRLL 59

Query: 779 FRGKEREDEECLHMVGVKDMSKVVLLEDPASRERKLEEMKKNQEISKACEPINKVRAEVD 600
           FRGKE+E++ECLHMVGVK+MSKV+LLEDPAS+E+KLEEMKK+Q I KA E +  VR EVD
Sbjct: 60  FRGKEKENDECLHMVGVKEMSKVILLEDPASKEKKLEEMKKDQGILKAYEAVALVRVEVD 119

Query: 599 RLAEKASILESAVRNGTKVDEKEFVVLTELLMVQLLKLDGIEAEGEARAQRRTEVRRVQS 420
           +L+EK   LE AVR G KV +KEFVVLTELLMVQLL+LD IEA+GEA+ QRR EV R+QS
Sbjct: 120 KLSEKIVALERAVRGGNKVVDKEFVVLTELLMVQLLQLDTIEADGEAKVQRRIEVCRIQS 179

Query: 419 LVETLDTLKARNSNPFSDSSNAVSVTTKWEKFDSGVGSLSAPPPV-SSSEATQDWESFD 246
            V+TLD LKARNSNPF++S+NAVSVTTKW  F+SG+GSLSAP P+ SS++ TQDWE FD
Sbjct: 180 FVDTLDNLKARNSNPFNNSTNAVSVTTKWVAFESGIGSLSAPTPLQSSTKITQDWELFD 238


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