BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010542
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30928.3| unnamed protein product [Vitis vinifera]               76   3e-12
ref|XP_002278480.1| PREDICTED: F-box protein At5g46170 isoform 1...    76   3e-12
emb|CAN73778.1| hypothetical protein VITISV_042179 [Vitis vinifera]    76   3e-12
gb|AEX97082.1| F-box family protein [Malus x domestica]                75   7e-12
ref|XP_003593894.1| F-box family protein [Medicago truncatula] g...    74   2e-11

>emb|CBI30928.3| unnamed protein product [Vitis vinifera]
          Length = 398

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/54 (66%), Positives = 43/54 (79%), Gaps = 1/54 (1%)
 Frame = +2

Query: 305 IWPEPDYTNPNPDVIIDH-DHFDRIPDSLLLIVFNKIEDVKTLGRCCVVSRRFY 463
           IWPEP  + P   ++ +  DHFDR+PDSLLL+VFNKI DVK LGRCCVVSRRF+
Sbjct: 45  IWPEPQNSPPPVMMMAEAIDHFDRLPDSLLLLVFNKIGDVKALGRCCVVSRRFH 98


>ref|XP_002278480.1| PREDICTED: F-box protein At5g46170 isoform 1 [Vitis vinifera]
           gi|359483890|ref|XP_003633032.1| PREDICTED: F-box
           protein At5g46170 isoform 2 [Vitis vinifera]
          Length = 399

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/54 (66%), Positives = 43/54 (79%), Gaps = 1/54 (1%)
 Frame = +2

Query: 305 IWPEPDYTNPNPDVIIDH-DHFDRIPDSLLLIVFNKIEDVKTLGRCCVVSRRFY 463
           IWPEP  + P   ++ +  DHFDR+PDSLLL+VFNKI DVK LGRCCVVSRRF+
Sbjct: 13  IWPEPQNSPPPVMMMAEAIDHFDRLPDSLLLLVFNKIGDVKALGRCCVVSRRFH 66


>emb|CAN73778.1| hypothetical protein VITISV_042179 [Vitis vinifera]
          Length = 399

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/54 (66%), Positives = 43/54 (79%), Gaps = 1/54 (1%)
 Frame = +2

Query: 305 IWPEPDYTNPNPDVIIDH-DHFDRIPDSLLLIVFNKIEDVKTLGRCCVVSRRFY 463
           IWPEP  + P   ++ +  DHFDR+PDSLLL+VFNKI DVK LGRCCVVSRRF+
Sbjct: 13  IWPEPQNSPPPVMMMAEAIDHFDRLPDSLLLLVFNKIGDVKALGRCCVVSRRFH 66


>gb|AEX97082.1| F-box family protein [Malus x domestica]
          Length = 403

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 36/55 (65%), Positives = 45/55 (81%)
 Frame = +2

Query: 299 SSIWPEPDYTNPNPDVIIDHDHFDRIPDSLLLIVFNKIEDVKTLGRCCVVSRRFY 463
           S+++PEP Y++      +D DHFDR+PDSLLL+VFNKI DVK LGRCCVVSRRF+
Sbjct: 12  STVYPEP-YSS------VDDDHFDRLPDSLLLLVFNKIGDVKALGRCCVVSRRFH 59


>ref|XP_003593894.1| F-box family protein [Medicago truncatula]
           gi|355482942|gb|AES64145.1| F-box family protein
           [Medicago truncatula]
          Length = 389

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/50 (68%), Positives = 38/50 (76%)
 Frame = +2

Query: 314 EPDYTNPNPDVIIDHDHFDRIPDSLLLIVFNKIEDVKTLGRCCVVSRRFY 463
           +P+   P P      DHFDRIPDSLLL+VFNKI DVK LGRCCVVSRRF+
Sbjct: 9   QPNRIYPEPSYFPQIDHFDRIPDSLLLLVFNKIGDVKALGRCCVVSRRFH 58