BLASTX nr result

ID: Coptis24_contig00010539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010539
         (213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320422.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
ref|XP_003624515.1| hypothetical protein MTR_7g084200 [Medicago ...    57   1e-06
dbj|BAB02458.1| unnamed protein product [Arabidopsis thaliana]         57   2e-06
ref|XP_003548851.1| PREDICTED: uncharacterized protein LOC100813...    57   2e-06
ref|XP_002885308.1| hypothetical protein ARALYDRAFT_342068 [Arab...    57   2e-06

>ref|XP_002320422.1| predicted protein [Populus trichocarpa] gi|222861195|gb|EEE98737.1|
           predicted protein [Populus trichocarpa]
          Length = 487

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/35 (74%), Positives = 31/35 (88%)
 Frame = -3

Query: 211 DSIGRYYCQSLKRANETIGTTTDELVLKAAQGTMS 107
           DS+GRY+C SL+RANE IGTTT+ELVLKA QG M+
Sbjct: 451 DSLGRYFCVSLRRANEIIGTTTEELVLKAQQGVMT 485


>ref|XP_003624515.1| hypothetical protein MTR_7g084200 [Medicago truncatula]
           gi|355499530|gb|AES80733.1| hypothetical protein
           MTR_7g084200 [Medicago truncatula]
          Length = 491

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/36 (75%), Positives = 30/36 (83%)
 Frame = -3

Query: 211 DSIGRYYCQSLKRANETIGTTTDELVLKAAQGTMST 104
           DSIGRY C  LKRANE IGTTT+ELVLKA QG ++T
Sbjct: 456 DSIGRYQCVGLKRANEIIGTTTEELVLKARQGNLTT 491


>dbj|BAB02458.1| unnamed protein product [Arabidopsis thaliana]
          Length = 516

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/32 (81%), Positives = 28/32 (87%)
 Frame = -3

Query: 211 DSIGRYYCQSLKRANETIGTTTDELVLKAAQG 116
           D+IGRYYC  LKRANE IGTTT+ELVLKA QG
Sbjct: 481 DTIGRYYCMGLKRANEIIGTTTEELVLKAKQG 512


>ref|XP_003548851.1| PREDICTED: uncharacterized protein LOC100813179 [Glycine max]
          Length = 492

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/36 (72%), Positives = 31/36 (86%)
 Frame = -3

Query: 211 DSIGRYYCQSLKRANETIGTTTDELVLKAAQGTMST 104
           DS+GRY C  LKRANE IGTTT+ELVLKA QG+M++
Sbjct: 457 DSVGRYQCVGLKRANEIIGTTTEELVLKAKQGSMTS 492


>ref|XP_002885308.1| hypothetical protein ARALYDRAFT_342068 [Arabidopsis lyrata subsp.
           lyrata] gi|297331148|gb|EFH61567.1| hypothetical protein
           ARALYDRAFT_342068 [Arabidopsis lyrata subsp. lyrata]
          Length = 524

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/32 (81%), Positives = 28/32 (87%)
 Frame = -3

Query: 211 DSIGRYYCQSLKRANETIGTTTDELVLKAAQG 116
           D+IGRYYC  LKRANE IGTTT+ELVLKA QG
Sbjct: 489 DTIGRYYCMGLKRANEIIGTTTEELVLKAKQG 520


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