BLASTX nr result
ID: Coptis24_contig00010538
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00010538 (1952 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK27110.1| unknown [Picea sitchensis] 142 2e-31 ref|XP_002271662.1| PREDICTED: protein ELC [Vitis vinifera] 132 4e-28 ref|XP_002303959.1| predicted protein [Populus trichocarpa] gi|2... 129 2e-27 gb|ABK96512.1| unknown [Populus trichocarpa x Populus deltoides] 129 3e-27 ref|XP_002525563.1| protein with unknown function [Ricinus commu... 124 9e-26 >gb|ABK27110.1| unknown [Picea sitchensis] Length = 161 Score = 142 bits (359), Expect = 2e-31 Identities = 71/87 (81%), Positives = 78/87 (89%) Frame = -1 Query: 1952 DTDEAFVPCDALSKQMLESTASDLAIEDAIYSLDKAAQEGSIPVDQYLKNIRSLSREQFF 1773 D D+ F PCDALS+QMLE TA+DLAIED +YSLDKAAQEGSIPVD YLKN+R+LSREQFF Sbjct: 73 DIDDVFEPCDALSRQMLECTAADLAIEDILYSLDKAAQEGSIPVDAYLKNVRALSREQFF 132 Query: 1772 HRATAAKVRAAQMQTQVVSMAARAPQY 1692 HRATAAKVRAAQMQ+QV SMAARA Y Sbjct: 133 HRATAAKVRAAQMQSQVASMAARASPY 159 >ref|XP_002271662.1| PREDICTED: protein ELC [Vitis vinifera] Length = 425 Score = 132 bits (331), Expect = 4e-28 Identities = 68/90 (75%), Positives = 75/90 (83%), Gaps = 1/90 (1%) Frame = -1 Query: 1952 DTDEAFVPCDALSKQMLESTASDLAIEDAIYSLDKAAQEGSIPVDQYLKNIRSLSREQFF 1773 D D AF PCDALSKQML+ T+SDL+IED IY+LDKA QEGSI DQYLKN+R LSREQFF Sbjct: 336 DVDNAFEPCDALSKQMLDCTSSDLSIEDTIYALDKAVQEGSISFDQYLKNVRLLSREQFF 395 Query: 1772 HRATAAKVRAAQMQTQVVSMAAR-APQYAM 1686 HRA AK+RAAQMQ QV SMAAR + QYAM Sbjct: 396 HRAMCAKLRAAQMQAQVASMAARVSSQYAM 425 >ref|XP_002303959.1| predicted protein [Populus trichocarpa] gi|222841391|gb|EEE78938.1| predicted protein [Populus trichocarpa] Length = 401 Score = 129 bits (325), Expect = 2e-27 Identities = 65/88 (73%), Positives = 74/88 (84%) Frame = -1 Query: 1952 DTDEAFVPCDALSKQMLESTASDLAIEDAIYSLDKAAQEGSIPVDQYLKNIRSLSREQFF 1773 D D AF D LSKQMLE TA D+AIEDA+YSL+KA QEG++P DQYL+N+R LSREQFF Sbjct: 313 DVDNAFECVDVLSKQMLECTAVDMAIEDAVYSLEKAVQEGAMPFDQYLRNVRLLSREQFF 372 Query: 1772 HRATAAKVRAAQMQTQVVSMAARAPQYA 1689 +RATAAKVRAAQMQ QV MAARAP+YA Sbjct: 373 NRATAAKVRAAQMQAQVAGMAARAPRYA 400 >gb|ABK96512.1| unknown [Populus trichocarpa x Populus deltoides] Length = 403 Score = 129 bits (324), Expect = 3e-27 Identities = 65/88 (73%), Positives = 75/88 (85%) Frame = -1 Query: 1952 DTDEAFVPCDALSKQMLESTASDLAIEDAIYSLDKAAQEGSIPVDQYLKNIRSLSREQFF 1773 D D+AF D LSKQMLE TA+D+AIED +YSLDKA QEG++P QYL+N+R LSREQFF Sbjct: 315 DVDKAFECVDVLSKQMLECTAADMAIEDVVYSLDKAVQEGAMPFVQYLRNVRLLSREQFF 374 Query: 1772 HRATAAKVRAAQMQTQVVSMAARAPQYA 1689 +RATAAKVRAAQMQ QV SMAARAP+YA Sbjct: 375 NRATAAKVRAAQMQAQVASMAARAPRYA 402 >ref|XP_002525563.1| protein with unknown function [Ricinus communis] gi|223535142|gb|EEF36822.1| protein with unknown function [Ricinus communis] Length = 419 Score = 124 bits (311), Expect = 9e-26 Identities = 63/88 (71%), Positives = 69/88 (78%) Frame = -1 Query: 1952 DTDEAFVPCDALSKQMLESTASDLAIEDAIYSLDKAAQEGSIPVDQYLKNIRSLSREQFF 1773 D D F DALSKQMLE T++DLAIED +YSLDKA QEG +P DQYL+N+R LSREQFF Sbjct: 331 DVDNVFECTDALSKQMLECTSADLAIEDVVYSLDKAVQEGVVPFDQYLRNVRLLSREQFF 390 Query: 1772 HRATAAKVRAAQMQTQVVSMAARAPQYA 1689 RATAAKVRA QMQ QV SMAAR YA Sbjct: 391 QRATAAKVRATQMQAQVASMAARLSHYA 418