BLASTX nr result

ID: Coptis24_contig00010538 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010538
         (1952 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK27110.1| unknown [Picea sitchensis]                             142   2e-31
ref|XP_002271662.1| PREDICTED: protein ELC [Vitis vinifera]           132   4e-28
ref|XP_002303959.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-27
gb|ABK96512.1| unknown [Populus trichocarpa x Populus deltoides]      129   3e-27
ref|XP_002525563.1| protein with unknown function [Ricinus commu...   124   9e-26

>gb|ABK27110.1| unknown [Picea sitchensis]
          Length = 161

 Score =  142 bits (359), Expect = 2e-31
 Identities = 71/87 (81%), Positives = 78/87 (89%)
 Frame = -1

Query: 1952 DTDEAFVPCDALSKQMLESTASDLAIEDAIYSLDKAAQEGSIPVDQYLKNIRSLSREQFF 1773
            D D+ F PCDALS+QMLE TA+DLAIED +YSLDKAAQEGSIPVD YLKN+R+LSREQFF
Sbjct: 73   DIDDVFEPCDALSRQMLECTAADLAIEDILYSLDKAAQEGSIPVDAYLKNVRALSREQFF 132

Query: 1772 HRATAAKVRAAQMQTQVVSMAARAPQY 1692
            HRATAAKVRAAQMQ+QV SMAARA  Y
Sbjct: 133  HRATAAKVRAAQMQSQVASMAARASPY 159


>ref|XP_002271662.1| PREDICTED: protein ELC [Vitis vinifera]
          Length = 425

 Score =  132 bits (331), Expect = 4e-28
 Identities = 68/90 (75%), Positives = 75/90 (83%), Gaps = 1/90 (1%)
 Frame = -1

Query: 1952 DTDEAFVPCDALSKQMLESTASDLAIEDAIYSLDKAAQEGSIPVDQYLKNIRSLSREQFF 1773
            D D AF PCDALSKQML+ T+SDL+IED IY+LDKA QEGSI  DQYLKN+R LSREQFF
Sbjct: 336  DVDNAFEPCDALSKQMLDCTSSDLSIEDTIYALDKAVQEGSISFDQYLKNVRLLSREQFF 395

Query: 1772 HRATAAKVRAAQMQTQVVSMAAR-APQYAM 1686
            HRA  AK+RAAQMQ QV SMAAR + QYAM
Sbjct: 396  HRAMCAKLRAAQMQAQVASMAARVSSQYAM 425


>ref|XP_002303959.1| predicted protein [Populus trichocarpa] gi|222841391|gb|EEE78938.1|
            predicted protein [Populus trichocarpa]
          Length = 401

 Score =  129 bits (325), Expect = 2e-27
 Identities = 65/88 (73%), Positives = 74/88 (84%)
 Frame = -1

Query: 1952 DTDEAFVPCDALSKQMLESTASDLAIEDAIYSLDKAAQEGSIPVDQYLKNIRSLSREQFF 1773
            D D AF   D LSKQMLE TA D+AIEDA+YSL+KA QEG++P DQYL+N+R LSREQFF
Sbjct: 313  DVDNAFECVDVLSKQMLECTAVDMAIEDAVYSLEKAVQEGAMPFDQYLRNVRLLSREQFF 372

Query: 1772 HRATAAKVRAAQMQTQVVSMAARAPQYA 1689
            +RATAAKVRAAQMQ QV  MAARAP+YA
Sbjct: 373  NRATAAKVRAAQMQAQVAGMAARAPRYA 400


>gb|ABK96512.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 403

 Score =  129 bits (324), Expect = 3e-27
 Identities = 65/88 (73%), Positives = 75/88 (85%)
 Frame = -1

Query: 1952 DTDEAFVPCDALSKQMLESTASDLAIEDAIYSLDKAAQEGSIPVDQYLKNIRSLSREQFF 1773
            D D+AF   D LSKQMLE TA+D+AIED +YSLDKA QEG++P  QYL+N+R LSREQFF
Sbjct: 315  DVDKAFECVDVLSKQMLECTAADMAIEDVVYSLDKAVQEGAMPFVQYLRNVRLLSREQFF 374

Query: 1772 HRATAAKVRAAQMQTQVVSMAARAPQYA 1689
            +RATAAKVRAAQMQ QV SMAARAP+YA
Sbjct: 375  NRATAAKVRAAQMQAQVASMAARAPRYA 402


>ref|XP_002525563.1| protein with unknown function [Ricinus communis]
            gi|223535142|gb|EEF36822.1| protein with unknown function
            [Ricinus communis]
          Length = 419

 Score =  124 bits (311), Expect = 9e-26
 Identities = 63/88 (71%), Positives = 69/88 (78%)
 Frame = -1

Query: 1952 DTDEAFVPCDALSKQMLESTASDLAIEDAIYSLDKAAQEGSIPVDQYLKNIRSLSREQFF 1773
            D D  F   DALSKQMLE T++DLAIED +YSLDKA QEG +P DQYL+N+R LSREQFF
Sbjct: 331  DVDNVFECTDALSKQMLECTSADLAIEDVVYSLDKAVQEGVVPFDQYLRNVRLLSREQFF 390

Query: 1772 HRATAAKVRAAQMQTQVVSMAARAPQYA 1689
             RATAAKVRA QMQ QV SMAAR   YA
Sbjct: 391  QRATAAKVRATQMQAQVASMAARLSHYA 418


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