BLASTX nr result
ID: Coptis24_contig00010526
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00010526 (225 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002522372.1| GTP-binding protein alpha subunit, gna, put... 61 3e-08 ref|XP_003517269.1| PREDICTED: uncharacterized protein LOC100778... 58 3e-08 ref|XP_003611845.1| Guanine nucleotide-binding protein alpha-2 s... 57 4e-08 ref|XP_003611844.1| Guanine nucleotide-binding protein alpha-2 s... 57 4e-08 ref|XP_002310767.1| predicted protein [Populus trichocarpa] gi|2... 59 2e-07 >ref|XP_002522372.1| GTP-binding protein alpha subunit, gna, putative [Ricinus communis] gi|223538450|gb|EEF40056.1| GTP-binding protein alpha subunit, gna, putative [Ricinus communis] Length = 917 Score = 61.2 bits (147), Expect(2) = 3e-08 Identities = 28/45 (62%), Positives = 33/45 (73%) Frame = -2 Query: 224 VNEDR*YKEEGHKNIKGNLWSKAGMKLVCSVLLLPYPFKTARDLG 90 VNED Y+EEG KN KG +W KAGMKLVC+ L LP P K++ LG Sbjct: 442 VNEDGSYQEEGQKNTKGYIWGKAGMKLVCTFLSLPVPSKSSNSLG 486 Score = 21.2 bits (43), Expect(2) = 3e-08 Identities = 9/10 (90%), Positives = 9/10 (90%) Frame = -1 Query: 99 GSGTSYIFKQ 70 GSGTS IFKQ Sbjct: 516 GSGTSTIFKQ 525 >ref|XP_003517269.1| PREDICTED: uncharacterized protein LOC100778059 [Glycine max] Length = 915 Score = 57.8 bits (138), Expect(2) = 3e-08 Identities = 26/45 (57%), Positives = 32/45 (71%) Frame = -2 Query: 224 VNEDR*YKEEGHKNIKGNLWSKAGMKLVCSVLLLPYPFKTARDLG 90 VNED Y+EEG KN +G +W KAG KLVC+ L LP P K++ LG Sbjct: 441 VNEDGSYQEEGQKNTRGYIWGKAGTKLVCAFLSLPVPSKSSNSLG 485 Score = 24.6 bits (52), Expect(2) = 3e-08 Identities = 10/12 (83%), Positives = 10/12 (83%) Frame = -1 Query: 105 CKGSGTSYIFKQ 70 C GSGTS IFKQ Sbjct: 513 CSGSGTSTIFKQ 524 >ref|XP_003611845.1| Guanine nucleotide-binding protein alpha-2 subunit [Medicago truncatula] gi|355513180|gb|AES94803.1| Guanine nucleotide-binding protein alpha-2 subunit [Medicago truncatula] Length = 908 Score = 57.4 bits (137), Expect(2) = 4e-08 Identities = 26/45 (57%), Positives = 32/45 (71%) Frame = -2 Query: 224 VNEDR*YKEEGHKNIKGNLWSKAGMKLVCSVLLLPYPFKTARDLG 90 VNED Y+EEG KN +G +W KAG KLVC+ L LP P K++ LG Sbjct: 433 VNEDGSYQEEGQKNTRGYIWGKAGTKLVCAFLSLPVPSKSSSSLG 477 Score = 24.6 bits (52), Expect(2) = 4e-08 Identities = 10/12 (83%), Positives = 10/12 (83%) Frame = -1 Query: 105 CKGSGTSYIFKQ 70 C GSGTS IFKQ Sbjct: 505 CSGSGTSTIFKQ 516 >ref|XP_003611844.1| Guanine nucleotide-binding protein alpha-2 subunit [Medicago truncatula] gi|355513179|gb|AES94802.1| Guanine nucleotide-binding protein alpha-2 subunit [Medicago truncatula] Length = 907 Score = 57.4 bits (137), Expect(2) = 4e-08 Identities = 26/45 (57%), Positives = 32/45 (71%) Frame = -2 Query: 224 VNEDR*YKEEGHKNIKGNLWSKAGMKLVCSVLLLPYPFKTARDLG 90 VNED Y+EEG KN +G +W KAG KLVC+ L LP P K++ LG Sbjct: 433 VNEDGSYQEEGQKNTRGYIWGKAGTKLVCAFLSLPVPSKSSSSLG 477 Score = 24.6 bits (52), Expect(2) = 4e-08 Identities = 10/12 (83%), Positives = 10/12 (83%) Frame = -1 Query: 105 CKGSGTSYIFKQ 70 C GSGTS IFKQ Sbjct: 505 CSGSGTSTIFKQ 516 >ref|XP_002310767.1| predicted protein [Populus trichocarpa] gi|222853670|gb|EEE91217.1| predicted protein [Populus trichocarpa] Length = 901 Score = 58.5 bits (140), Expect(2) = 2e-07 Identities = 27/45 (60%), Positives = 31/45 (68%) Frame = -2 Query: 224 VNEDR*YKEEGHKNIKGNLWSKAGMKLVCSVLLLPYPFKTARDLG 90 VNED Y+EEG KN KG +W KAGMKLVC+ L LP P K + G Sbjct: 435 VNEDGSYQEEGQKNTKGYIWGKAGMKLVCAFLSLPVPSKPSNSCG 479 Score = 21.2 bits (43), Expect(2) = 2e-07 Identities = 9/10 (90%), Positives = 9/10 (90%) Frame = -1 Query: 99 GSGTSYIFKQ 70 GSGTS IFKQ Sbjct: 509 GSGTSTIFKQ 518