BLASTX nr result

ID: Coptis24_contig00010526 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010526
         (225 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522372.1| GTP-binding  protein alpha subunit, gna, put...    61   3e-08
ref|XP_003517269.1| PREDICTED: uncharacterized protein LOC100778...    58   3e-08
ref|XP_003611845.1| Guanine nucleotide-binding protein alpha-2 s...    57   4e-08
ref|XP_003611844.1| Guanine nucleotide-binding protein alpha-2 s...    57   4e-08
ref|XP_002310767.1| predicted protein [Populus trichocarpa] gi|2...    59   2e-07

>ref|XP_002522372.1| GTP-binding  protein alpha subunit, gna, putative [Ricinus
           communis] gi|223538450|gb|EEF40056.1| GTP-binding
           protein alpha subunit, gna, putative [Ricinus communis]
          Length = 917

 Score = 61.2 bits (147), Expect(2) = 3e-08
 Identities = 28/45 (62%), Positives = 33/45 (73%)
 Frame = -2

Query: 224 VNEDR*YKEEGHKNIKGNLWSKAGMKLVCSVLLLPYPFKTARDLG 90
           VNED  Y+EEG KN KG +W KAGMKLVC+ L LP P K++  LG
Sbjct: 442 VNEDGSYQEEGQKNTKGYIWGKAGMKLVCTFLSLPVPSKSSNSLG 486



 Score = 21.2 bits (43), Expect(2) = 3e-08
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = -1

Query: 99  GSGTSYIFKQ 70
           GSGTS IFKQ
Sbjct: 516 GSGTSTIFKQ 525


>ref|XP_003517269.1| PREDICTED: uncharacterized protein LOC100778059 [Glycine max]
          Length = 915

 Score = 57.8 bits (138), Expect(2) = 3e-08
 Identities = 26/45 (57%), Positives = 32/45 (71%)
 Frame = -2

Query: 224 VNEDR*YKEEGHKNIKGNLWSKAGMKLVCSVLLLPYPFKTARDLG 90
           VNED  Y+EEG KN +G +W KAG KLVC+ L LP P K++  LG
Sbjct: 441 VNEDGSYQEEGQKNTRGYIWGKAGTKLVCAFLSLPVPSKSSNSLG 485



 Score = 24.6 bits (52), Expect(2) = 3e-08
 Identities = 10/12 (83%), Positives = 10/12 (83%)
 Frame = -1

Query: 105 CKGSGTSYIFKQ 70
           C GSGTS IFKQ
Sbjct: 513 CSGSGTSTIFKQ 524


>ref|XP_003611845.1| Guanine nucleotide-binding protein alpha-2 subunit [Medicago
           truncatula] gi|355513180|gb|AES94803.1| Guanine
           nucleotide-binding protein alpha-2 subunit [Medicago
           truncatula]
          Length = 908

 Score = 57.4 bits (137), Expect(2) = 4e-08
 Identities = 26/45 (57%), Positives = 32/45 (71%)
 Frame = -2

Query: 224 VNEDR*YKEEGHKNIKGNLWSKAGMKLVCSVLLLPYPFKTARDLG 90
           VNED  Y+EEG KN +G +W KAG KLVC+ L LP P K++  LG
Sbjct: 433 VNEDGSYQEEGQKNTRGYIWGKAGTKLVCAFLSLPVPSKSSSSLG 477



 Score = 24.6 bits (52), Expect(2) = 4e-08
 Identities = 10/12 (83%), Positives = 10/12 (83%)
 Frame = -1

Query: 105 CKGSGTSYIFKQ 70
           C GSGTS IFKQ
Sbjct: 505 CSGSGTSTIFKQ 516


>ref|XP_003611844.1| Guanine nucleotide-binding protein alpha-2 subunit [Medicago
           truncatula] gi|355513179|gb|AES94802.1| Guanine
           nucleotide-binding protein alpha-2 subunit [Medicago
           truncatula]
          Length = 907

 Score = 57.4 bits (137), Expect(2) = 4e-08
 Identities = 26/45 (57%), Positives = 32/45 (71%)
 Frame = -2

Query: 224 VNEDR*YKEEGHKNIKGNLWSKAGMKLVCSVLLLPYPFKTARDLG 90
           VNED  Y+EEG KN +G +W KAG KLVC+ L LP P K++  LG
Sbjct: 433 VNEDGSYQEEGQKNTRGYIWGKAGTKLVCAFLSLPVPSKSSSSLG 477



 Score = 24.6 bits (52), Expect(2) = 4e-08
 Identities = 10/12 (83%), Positives = 10/12 (83%)
 Frame = -1

Query: 105 CKGSGTSYIFKQ 70
           C GSGTS IFKQ
Sbjct: 505 CSGSGTSTIFKQ 516


>ref|XP_002310767.1| predicted protein [Populus trichocarpa] gi|222853670|gb|EEE91217.1|
           predicted protein [Populus trichocarpa]
          Length = 901

 Score = 58.5 bits (140), Expect(2) = 2e-07
 Identities = 27/45 (60%), Positives = 31/45 (68%)
 Frame = -2

Query: 224 VNEDR*YKEEGHKNIKGNLWSKAGMKLVCSVLLLPYPFKTARDLG 90
           VNED  Y+EEG KN KG +W KAGMKLVC+ L LP P K +   G
Sbjct: 435 VNEDGSYQEEGQKNTKGYIWGKAGMKLVCAFLSLPVPSKPSNSCG 479



 Score = 21.2 bits (43), Expect(2) = 2e-07
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = -1

Query: 99  GSGTSYIFKQ 70
           GSGTS IFKQ
Sbjct: 509 GSGTSTIFKQ 518


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