BLASTX nr result

ID: Coptis24_contig00010521 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010521
         (636 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332782.1| BED finger-nbs-lrr resistance protein [Popul...   198   8e-49
ref|XP_002333864.1| nbs-lrr resistance protein [Populus trichoca...   194   1e-47
ref|XP_002325315.1| nbs-lrr resistance protein [Populus trichoca...   189   3e-46
ref|XP_002332784.1| BED finger-nbs-lrr resistance protein [Popul...   188   6e-46
ref|XP_002332780.1| nbs-lrr resistance protein [Populus trichoca...   188   8e-46

>ref|XP_002332782.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222833191|gb|EEE71668.1| BED finger-nbs-lrr
           resistance protein [Populus trichocarpa]
          Length = 1214

 Score =  198 bits (503), Expect = 8e-49
 Identities = 102/209 (48%), Positives = 135/209 (64%), Gaps = 2/209 (0%)
 Frame = +2

Query: 2   LMDDEVRKIGVYGMGGIGKTTILKEINNRLLREQERFDKIIWITVSRDANVRKLQDDISK 181
           LMDDEV  IG+YGMGG+GKTTILK I+N LL+  + +D + W+TVS+D N+ +LQ+ I+ 
Sbjct: 328 LMDDEVPTIGIYGMGGVGKTTILKHIHNELLQRPDIYDHVWWVTVSQDFNINRLQNFIAT 387

Query: 182 ELDLDLSGVDNXXXXXXXXXXXXXXXXXXXXILDDMWEAFPLHEVGIPEPTKHSGCKLAL 361
           +L L+LS  D+                    ILDD+W  F L EVGIPE  K  GCKL +
Sbjct: 388 QLHLNLSREDDDLHRAVKLSEELKRKQKWILILDDLWNNFELEEVGIPEKLK--GCKLIM 445

Query: 362 STRSSEVCKKMECQMSIEVELLSKEEAWELFMDKIAELLA--PEITEIAKILIEECAGLP 535
           +TRS  VC +M C   I+V+LLS+ EAW LFM+K+   +A  PE+  IAK +  ECAGLP
Sbjct: 446 TTRSKTVCHQMACHRKIKVKLLSEREAWTLFMEKLGRAMALLPEVEGIAKAVARECAGLP 505

Query: 536 LAIVATGGAMTGKDDIQEWRVALSDLRDS 622
           L I+A  G++ G DD  EWR  L+ LR+S
Sbjct: 506 LGIIAVAGSLRGVDDPHEWRNTLNKLRES 534


>ref|XP_002333864.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222838740|gb|EEE77105.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 957

 Score =  194 bits (493), Expect = 1e-47
 Identities = 101/209 (48%), Positives = 135/209 (64%), Gaps = 2/209 (0%)
 Frame = +2

Query: 2   LMDDEVRKIGVYGMGGIGKTTILKEINNRLLREQERFDKIIWITVSRDANVRKLQDDISK 181
           LMDD+V  I +YGMGGIGKTTIL+ I+N LL+  +  D + W+TVS+D +++KLQ+ I+K
Sbjct: 166 LMDDKVSIISIYGMGGIGKTTILQHIHNELLQRPDICDYVWWVTVSQDFSIKKLQNRIAK 225

Query: 182 ELDLDLSGVDNXXXXXXXXXXXXXXXXXXXXILDDMWEAFPLHEVGIPEPTKHSGCKLAL 361
            L LDLS  D+                    ILDD+W  F LH+VGIPE  K  GCKL +
Sbjct: 226 RLHLDLSSEDDELHRAGRLSKKLKKKQKWILILDDLWNYFDLHKVGIPE--KLEGCKLIM 283

Query: 362 STRSSEVCKKMECQMSIEVELLSKEEAWELFMDKIAE--LLAPEITEIAKILIEECAGLP 535
           +TRS  VC+ M CQ  I+V+ LS  EAW LFM+K+     L+PE+  IAK + +ECAGLP
Sbjct: 284 TTRSETVCEGMACQHKIKVKPLSNREAWALFMEKLERDVALSPEVEGIAKAVAKECAGLP 343

Query: 536 LAIVATGGAMTGKDDIQEWRVALSDLRDS 622
           L I+   G++ G DD+ EWR  L+ LR+S
Sbjct: 344 LGIITVAGSLRGVDDLHEWRNTLNKLRES 372


>ref|XP_002325315.1| nbs-lrr resistance protein [Populus trichocarpa]
            gi|222862190|gb|EEE99696.1| nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1199

 Score =  189 bits (481), Expect = 3e-46
 Identities = 97/209 (46%), Positives = 132/209 (63%), Gaps = 2/209 (0%)
 Frame = +2

Query: 2    LMDDEVRKIGVYGMGGIGKTTILKEINNRLLREQERFDKIIWITVSRDANVRKLQDDISK 181
            LMDDEV  IG+YGMGG+GKTTIL+ I N LL+ Q   D + W+TVS+D ++ +LQ+ I+K
Sbjct: 405  LMDDEVLTIGIYGMGGVGKTTILQHIYNELLQRQNICDHVWWVTVSQDFSINRLQNLIAK 464

Query: 182  ELDLDLSGVDNXXXXXXXXXXXXXXXXXXXXILDDMWEAFPLHEVGIPEPTKHSGCKLAL 361
             LDLDLS  D+                    ILDD+W  F LH+V IP P K  GCKL +
Sbjct: 465  RLDLDLSSEDDDLHRAAKLSEELRKKQKWILILDDLWNNFELHKVEIPVPLK--GCKLIM 522

Query: 362  STRSSEVCKKMECQMSIEVELLSKEEAWELFMDKIAE--LLAPEITEIAKILIEECAGLP 535
            +T+S  VC +M C   I+V+ LS+ EAW LFM+ +     L+PE+  IA+ + +ECAGLP
Sbjct: 523  TTQSETVCHRMACHHKIKVKPLSEGEAWTLFMENLGRDIALSPEVERIAEAVAKECAGLP 582

Query: 536  LAIVATGGAMTGKDDIQEWRVALSDLRDS 622
            L I+   G++ G DD+ EWR  L  L++S
Sbjct: 583  LGIITVAGSLRGVDDLHEWRNTLKKLKES 611


>ref|XP_002332784.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222833193|gb|EEE71670.1| BED finger-nbs-lrr
           resistance protein [Populus trichocarpa]
          Length = 1012

 Score =  188 bits (478), Expect = 6e-46
 Identities = 98/209 (46%), Positives = 133/209 (63%), Gaps = 2/209 (0%)
 Frame = +2

Query: 2   LMDDEVRKIGVYGMGGIGKTTILKEINNRLLREQERFDKIIWITVSRDANVRKLQDDISK 181
           LMDDEV  IG+YGMGG+GKT ILK I+N LL+  + +D + W+TVS+D N+ +LQ+ I+ 
Sbjct: 364 LMDDEVPTIGIYGMGGVGKTIILKHIHNELLQRPDIYDHVWWVTVSQDFNINRLQNLIAT 423

Query: 182 ELDLDLSGVDNXXXXXXXXXXXXXXXXXXXXILDDMWEAFPLHEVGIPEPTKHSGCKLAL 361
           +L L+LS  D+                    ILDD+W  F L EVGIPE  K  GCKL +
Sbjct: 424 QLHLNLSREDDDLHRAAKLSEELKREQKWILILDDLWNNFELEEVGIPEKLK--GCKLIM 481

Query: 362 STRSSEVCKKMECQMSIEVELLSKEEAWELFMDKI--AELLAPEITEIAKILIEECAGLP 535
           +TRS  VC +M C   I+V+ LS+ EAW LFM+K+     L+ E+  IAK++ +ECAGLP
Sbjct: 482 TTRSKTVCHQMACHRKIKVKPLSEGEAWTLFMEKLGCGIALSREVEGIAKVVAKECAGLP 541

Query: 536 LAIVATGGAMTGKDDIQEWRVALSDLRDS 622
           L I+   G++ G DD+ EWR  L  LR+S
Sbjct: 542 LGIITMAGSLRGVDDLHEWRNTLKKLRES 570


>ref|XP_002332780.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222833189|gb|EEE71666.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 926

 Score =  188 bits (477), Expect = 8e-46
 Identities = 97/209 (46%), Positives = 134/209 (64%), Gaps = 2/209 (0%)
 Frame = +2

Query: 2   LMDDEVRKIGVYGMGGIGKTTILKEINNRLLREQERFDKIIWITVSRDANVRKLQDDISK 181
           +MD +V  IG+YGMGG+GKTTIL+ I+N LL++ +  D + W+TVS+D ++ +LQ+ I+K
Sbjct: 148 IMDGKVPIIGIYGMGGVGKTTILQHIHNELLQKPDICDNVWWVTVSQDFSINRLQNLIAK 207

Query: 182 ELDLDLSGVDNXXXXXXXXXXXXXXXXXXXXILDDMWEAFPLHEVGIPEPTKHSGCKLAL 361
            LDL+LS  D+                    ILDD+W  F LH+V IPE  K  GCKL +
Sbjct: 208 RLDLNLSSEDDDLLGAAELSEELRKKQKWILILDDLWNNFELHKVDIPE--KLEGCKLIM 265

Query: 362 STRSSEVCKKMECQMSIEVELLSKEEAWELFMDKIAE--LLAPEITEIAKILIEECAGLP 535
           +TRS  VC +M CQ  I+V+ LS  EAW LFM K+     L+PE+  IAK++  ECAGLP
Sbjct: 266 TTRSETVCHRMVCQHKIKVKPLSNGEAWTLFMKKLRRDVALSPEVEGIAKVVARECAGLP 325

Query: 536 LAIVATGGAMTGKDDIQEWRVALSDLRDS 622
           L I+   G++ G DD+ EWR  L+ LR+S
Sbjct: 326 LRIITVAGSLRGVDDLHEWRNTLNKLRES 354


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