BLASTX nr result

ID: Coptis24_contig00010513 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010513
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002887533.1| hypothetical protein ARALYDRAFT_339621 [Arab...   192   2e-47
gb|AAG52407.1|AC020579_9 putative mitochondrial carrier protein;...   189   2e-46
ref|NP_177564.2| Mitochondrial substrate carrier family protein ...   189   2e-46
ref|XP_003598987.1| Mitochondrial substrate carrier family prote...   188   4e-46
emb|CAN77961.1| hypothetical protein VITISV_022947 [Vitis vinifera]   187   1e-45

>ref|XP_002887533.1| hypothetical protein ARALYDRAFT_339621 [Arabidopsis lyrata subsp.
           lyrata] gi|297333374|gb|EFH63792.1| hypothetical protein
           ARALYDRAFT_339621 [Arabidopsis lyrata subsp. lyrata]
          Length = 364

 Score =  192 bits (489), Expect = 2e-47
 Identities = 92/149 (61%), Positives = 111/149 (74%), Gaps = 7/149 (4%)
 Frame = -3

Query: 426 MAEATSSSSNETQP-------HLIASHLNKNSFFIWKEFVWXXXXXXXXXGMMHPIDTIK 268
           MA  +  SS+E  P        + A+H   + FF+W+EF+W         GMMHP+DT+K
Sbjct: 1   MATKSPDSSHEQPPLSYRKSVEIKATH---DQFFVWREFLWGGIAGAFGEGMMHPVDTLK 57

Query: 267 TRIQSQAIVNASQAQKSIPQMVRTVWAADGIRGFYRGVTPGITGSLATGATYFSVIESTK 88
           TR+QSQ I+NA+Q QKSIPQM+RTVW  DG++GFYRG+ PG+TGSLATGATYF  IESTK
Sbjct: 58  TRLQSQIIMNATQRQKSIPQMLRTVWVGDGLKGFYRGIAPGVTGSLATGATYFGFIESTK 117

Query: 87  KWIEESHPDRSGHWAHFIAGGVGDTLGSF 1
           KWIEESHP  +GHWAHFIAG VGDTLGSF
Sbjct: 118 KWIEESHPSLAGHWAHFIAGAVGDTLGSF 146


>gb|AAG52407.1|AC020579_9 putative mitochondrial carrier protein; 35518-32968 [Arabidopsis
           thaliana]
          Length = 367

 Score =  189 bits (481), Expect = 2e-46
 Identities = 91/149 (61%), Positives = 111/149 (74%), Gaps = 7/149 (4%)
 Frame = -3

Query: 426 MAEATSSSSNETQP-------HLIASHLNKNSFFIWKEFVWXXXXXXXXXGMMHPIDTIK 268
           MA  +S SS++  P        + A+H   + FF+W+EF+W         GMMHP+DT+K
Sbjct: 1   MATKSSDSSHKQSPPSFRKSVEIKATH---DQFFVWREFLWGGIAGAFGEGMMHPVDTLK 57

Query: 267 TRIQSQAIVNASQAQKSIPQMVRTVWAADGIRGFYRGVTPGITGSLATGATYFSVIESTK 88
           TR+QSQ I+NA+Q QKSI QM+RTVW  DG++GFYRG+ PG+TGSLATGATYF  IESTK
Sbjct: 58  TRLQSQIIMNATQRQKSILQMLRTVWVGDGLKGFYRGIAPGVTGSLATGATYFGFIESTK 117

Query: 87  KWIEESHPDRSGHWAHFIAGGVGDTLGSF 1
           KWIEESHP  +GHWAHFIAG VGDTLGSF
Sbjct: 118 KWIEESHPSLAGHWAHFIAGAVGDTLGSF 146


>ref|NP_177564.2| Mitochondrial substrate carrier family protein [Arabidopsis
           thaliana] gi|26450340|dbj|BAC42286.1| putative
           mitochondrial carrier protein [Arabidopsis thaliana]
           gi|28827414|gb|AAO50551.1| putative mitochondrial
           carrier protein [Arabidopsis thaliana]
           gi|332197448|gb|AEE35569.1| Mitochondrial substrate
           carrier family protein [Arabidopsis thaliana]
          Length = 364

 Score =  189 bits (481), Expect = 2e-46
 Identities = 91/149 (61%), Positives = 111/149 (74%), Gaps = 7/149 (4%)
 Frame = -3

Query: 426 MAEATSSSSNETQP-------HLIASHLNKNSFFIWKEFVWXXXXXXXXXGMMHPIDTIK 268
           MA  +S SS++  P        + A+H   + FF+W+EF+W         GMMHP+DT+K
Sbjct: 1   MATKSSDSSHKQSPPSFRKSVEIKATH---DQFFVWREFLWGGIAGAFGEGMMHPVDTLK 57

Query: 267 TRIQSQAIVNASQAQKSIPQMVRTVWAADGIRGFYRGVTPGITGSLATGATYFSVIESTK 88
           TR+QSQ I+NA+Q QKSI QM+RTVW  DG++GFYRG+ PG+TGSLATGATYF  IESTK
Sbjct: 58  TRLQSQIIMNATQRQKSILQMLRTVWVGDGLKGFYRGIAPGVTGSLATGATYFGFIESTK 117

Query: 87  KWIEESHPDRSGHWAHFIAGGVGDTLGSF 1
           KWIEESHP  +GHWAHFIAG VGDTLGSF
Sbjct: 118 KWIEESHPSLAGHWAHFIAGAVGDTLGSF 146


>ref|XP_003598987.1| Mitochondrial substrate carrier family protein E [Medicago
           truncatula] gi|355488035|gb|AES69238.1| Mitochondrial
           substrate carrier family protein E [Medicago truncatula]
          Length = 358

 Score =  188 bits (477), Expect = 4e-46
 Identities = 91/141 (64%), Positives = 107/141 (75%)
 Frame = -3

Query: 426 MAEATSSSSNETQPHLIASHLNKNSFFIWKEFVWXXXXXXXXXGMMHPIDTIKTRIQSQA 247
           MA  +S SS    P+    +++++ FF+W+EFVW         GMMHP+DTIKTRIQSQA
Sbjct: 1   MAVQSSISSKPQDPN----NVSRDHFFVWREFVWGAVAGAFGEGMMHPVDTIKTRIQSQA 56

Query: 246 IVNASQAQKSIPQMVRTVWAADGIRGFYRGVTPGITGSLATGATYFSVIESTKKWIEESH 67
           I+N  + QK I QMVR+VW  DG+RGFYRGV PG+TGSLATGATYF VIESTKKWIE+SH
Sbjct: 57  ILNGVKNQKGILQMVRSVWKIDGLRGFYRGVVPGVTGSLATGATYFGVIESTKKWIEDSH 116

Query: 66  PDRSGHWAHFIAGGVGDTLGS 4
           P   GHWAHFIAG VGDTLGS
Sbjct: 117 PSLGGHWAHFIAGAVGDTLGS 137


>emb|CAN77961.1| hypothetical protein VITISV_022947 [Vitis vinifera]
          Length = 376

 Score =  187 bits (474), Expect = 1e-45
 Identities = 87/115 (75%), Positives = 95/115 (82%)
 Frame = -3

Query: 345 IWKEFVWXXXXXXXXXGMMHPIDTIKTRIQSQAIVNASQAQKSIPQMVRTVWAADGIRGF 166
           IW+EFVW         GMMHPIDT+KTRIQSQAI+   Q QK+I QMV T+WAADG+RGF
Sbjct: 51  IWREFVWGAMAGAFGEGMMHPIDTVKTRIQSQAILRGGQNQKTIIQMVHTIWAADGLRGF 110

Query: 165 YRGVTPGITGSLATGATYFSVIESTKKWIEESHPDRSGHWAHFIAGGVGDTLGSF 1
           YRG+TPG+TGSLATGATYF VIESTKKWIEESHP   GHWAHFIAG VGDTLGSF
Sbjct: 111 YRGITPGLTGSLATGATYFGVIESTKKWIEESHPSLEGHWAHFIAGSVGDTLGSF 165


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