BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010512
         (568 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF36296.1| hypothetical protein [Ipomoea trifida]                152   4e-35
ref|XP_002879125.1| cdk-subunit 1 [Arabidopsis lyrata subsp. lyr...   152   5e-35
gb|AAS79576.1| putative CDK regulatory subunit [Ipomoea trifida]      152   5e-35
ref|NP_180363.1| cyclin-dependent kinases regulatory subunit 1 [...   151   6e-35
ref|XP_003606312.1| Cyclin-dependent kinases regulatory subunit ...   150   1e-34

>dbj|BAF36296.1| hypothetical protein [Ipomoea trifida]
          Length = 1291

 Score =  152 bits (384), Expect = 4e-35
 Identities = 71/73 (97%), Positives = 72/73 (98%)
 Frame = -3

Query: 458  KMGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHR 279
            +MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHR
Sbjct: 1203 EMGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHR 1262

Query: 278  PELHIMLFRRPLN 240
            PE HIMLFRRPLN
Sbjct: 1263 PEPHIMLFRRPLN 1275


>ref|XP_002879125.1| cdk-subunit 1 [Arabidopsis lyrata subsp. lyrata]
           gi|297324964|gb|EFH55384.1| cdk-subunit 1 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 87

 Score =  152 bits (383), Expect = 5e-35
 Identities = 71/72 (98%), Positives = 71/72 (98%)
 Frame = -3

Query: 455 MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 276
           MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP
Sbjct: 1   MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 275 ELHIMLFRRPLN 240
           E HIMLFRRPLN
Sbjct: 61  EPHIMLFRRPLN 72


>gb|AAS79576.1| putative CDK regulatory subunit [Ipomoea trifida]
          Length = 88

 Score =  152 bits (383), Expect = 5e-35
 Identities = 71/72 (98%), Positives = 71/72 (98%)
 Frame = -3

Query: 455 MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 276
           MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP
Sbjct: 1   MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 275 ELHIMLFRRPLN 240
           E HIMLFRRPLN
Sbjct: 61  EPHIMLFRRPLN 72


>ref|NP_180363.1| cyclin-dependent kinases regulatory subunit 1 [Arabidopsis
           thaliana] gi|75097781|sp|O23249.1|CKS1_ARATH RecName:
           Full=Cyclin-dependent kinases regulatory subunit 1;
           AltName: Full=CKS1-At gi|2274859|emb|CAA03859.1| Cks1
           protein [Arabidopsis thaliana] gi|4510420|gb|AAD21506.1|
           putative cyclin-dependent kinase regulatory subunit
           [Arabidopsis thaliana] gi|21593913|gb|AAM65878.1|
           putative cyclin-dependent kinase regulatory subunit
           [Arabidopsis thaliana] gi|51969580|dbj|BAD43482.1|
           putative cyclin-dependent kinase regulatory subunit
           [Arabidopsis thaliana] gi|51969798|dbj|BAD43591.1|
           putative cyclin-dependent kinase regulatory subunit
           [Arabidopsis thaliana] gi|51970380|dbj|BAD43882.1|
           putative cyclin-dependent kinase regulatory subunit
           [Arabidopsis thaliana] gi|88010880|gb|ABD38867.1|
           At2g27960 [Arabidopsis thaliana]
           gi|330252970|gb|AEC08064.1| cyclin-dependent kinases
           regulatory subunit 1 [Arabidopsis thaliana]
          Length = 87

 Score =  151 bits (382), Expect = 6e-35
 Identities = 70/72 (97%), Positives = 71/72 (98%)
 Frame = -3

Query: 455 MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 276
           MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYA+HRP
Sbjct: 1   MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAVHRP 60

Query: 275 ELHIMLFRRPLN 240
           E HIMLFRRPLN
Sbjct: 61  EPHIMLFRRPLN 72


>ref|XP_003606312.1| Cyclin-dependent kinases regulatory subunit [Medicago truncatula]
           gi|355507367|gb|AES88509.1| Cyclin-dependent kinases
           regulatory subunit [Medicago truncatula]
           gi|388496380|gb|AFK36256.1| unknown [Medicago
           truncatula]
          Length = 88

 Score =  150 bits (380), Expect = 1e-34
 Identities = 70/72 (97%), Positives = 71/72 (98%)
 Frame = -3

Query: 455 MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 276
           MGQIQYSEKYFDDT+EYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP
Sbjct: 1   MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 275 ELHIMLFRRPLN 240
           E HIMLFRRPLN
Sbjct: 61  EPHIMLFRRPLN 72