BLASTX nr result

ID: Coptis24_contig00010507 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010507
         (1522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635549.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   431   e-118
emb|CBI23596.3| unnamed protein product [Vitis vinifera]              431   e-118
ref|XP_002284582.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   427   e-117
ref|XP_002284642.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   426   e-117
ref|XP_002315713.1| predicted protein [Populus trichocarpa] gi|2...   425   e-116

>ref|XP_003635549.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like
            [Vitis vinifera]
          Length = 368

 Score =  431 bits (1108), Expect = e-118
 Identities = 211/363 (58%), Positives = 270/363 (74%), Gaps = 4/363 (1%)
 Frame = +1

Query: 103  EKMTLDYDRLKEVKAFDDTKAGVKGLVDAGVVKLPRIFIRPNGELAKNSVTTNLSDLKIP 282
            E M  +YDR  E+ AFDD+KAGVKGLVDAGV K+PR+FI P   L + SV+TN + L+IP
Sbjct: 8    EGMDSEYDRKSELIAFDDSKAGVKGLVDAGVAKIPRMFIHPQHNLREKSVSTN-AQLRIP 66

Query: 283  LIDLEGIDKDEKRRQKVVDEVGRASETWGFFQIVNHGIPTTTLDEIIEGVLRFNEQDTEV 462
            +IDLEG++ D   R K++D+V  A E WG FQIVNHGI    L+E+I+G+ RFNEQDTEV
Sbjct: 67   IIDLEGVNSDAILRAKIIDKVRNACEIWGIFQIVNHGILKCVLEEMIKGIRRFNEQDTEV 126

Query: 463  KKKFYTRDYSKKVRFNSNLDLFTSRFACWRDTLSCSMAPTQPQPDELPQVCRDVTIEYTK 642
            KK+FYTRD+SKKV F SN DLF +  A W+D+ SC +AP  P P ++P VCRD+ +EY+K
Sbjct: 127  KKEFYTRDFSKKVTFVSNFDLFQAPAATWKDSFSCIIAPNPPDPTDMPAVCRDIIMEYSK 186

Query: 643  CATTLGETLLQLLSEALGLKANYLKELDCSKSYTLVTHYSPTCPEPELTMGSESHTDPAF 822
                L  TL +L++EALGL +N+LK+++C++   LV+HY P CPEPELTMG+++HTDP F
Sbjct: 187  QVKMLANTLFELVAEALGLNSNHLKDMECAEGLFLVSHYYPACPEPELTMGTKTHTDPTF 246

Query: 823  LTVLLQDNIGGLQVFHKNQWVDVQPIPGALVINIGDLLQLISNDKYRSVEHRVLANKTGG 1002
            LTVLLQD +GGLQV H+ QWV+V P+PGALVIN GDLLQL+SND +RS +HRVLAN   G
Sbjct: 247  LTVLLQDQVGGLQVLHEKQWVNVNPVPGALVINTGDLLQLVSNDMFRSAKHRVLANHK-G 305

Query: 1003 PRISVAFFFSTVSEATEKRYGPIKELLSDENPPIYRETLVKDF----VGRFTYGKPTLEH 1170
            PR+SVA FFS  S  + K YGPIKELLS++NPP Y+ET  +D+          G   L+H
Sbjct: 306  PRVSVASFFSPFSLPSSKLYGPIKELLSEDNPPKYKETTARDYGTCHRAERLDGTSALQH 365

Query: 1171 FKL 1179
            F L
Sbjct: 366  FML 368


>emb|CBI23596.3| unnamed protein product [Vitis vinifera]
          Length = 359

 Score =  431 bits (1107), Expect = e-118
 Identities = 213/364 (58%), Positives = 271/364 (74%), Gaps = 7/364 (1%)
 Frame = +1

Query: 109  MTLDYDRLKEVKAFDDTKAGVKGLVDAGVVKLPRIFIRPNGELAKNSVTTNLSDLKIPLI 288
            M  +YDR  E+ AFDD+KAGVKGLVDAGV K+PR+FI P   L + SV+TN + L+IP+I
Sbjct: 1    MDSEYDRKSELIAFDDSKAGVKGLVDAGVAKIPRMFIHPQHNLREKSVSTN-AQLRIPII 59

Query: 289  DLEGIDKDEKRRQKVVDEVGRASETWGFFQIVNHGIPTTTLDEIIEGVLRFNEQDTEVKK 468
            DLEG++ D   R K++D+V  A E WG FQIVNHGI  + L+E+I+G+ RFNEQDTEVKK
Sbjct: 60   DLEGVNSDAILRAKIIDKVRNACEIWGIFQIVNHGILKSVLEEMIKGIRRFNEQDTEVKK 119

Query: 469  KFYTRDYSKKVRFNSNLDLFTSRFACWRDTLSCSMAPTQPQPDELPQVCRDVTIEYTKCA 648
            +FYTRD SKKV+F SN DLF +  A W+D+ SC + P  P P ++P VCRD+ +EY+K  
Sbjct: 120  EFYTRDSSKKVKFVSNFDLFQAPAATWKDSFSCIINPNPPDPTDMPAVCRDIIMEYSKQV 179

Query: 649  TTLGETLLQLLSEALGLKANYLKELDCSKSYTLVTHYSPTCPEPELTMGSESHTDPAFLT 828
              L  TL +L++EALGL +N+LK+++C++   LV+HY P CPEPELTMG+++HTDP FLT
Sbjct: 180  KMLANTLFELVAEALGLNSNHLKDMECAEGLFLVSHYYPACPEPELTMGTKTHTDPTFLT 239

Query: 829  VLLQDNIGGLQVFHKNQWVDVQPIPGALVINIGDLLQLISNDKYRSVEHRVLANKTGGPR 1008
            VLLQD +GGLQV H+ QWV+V P+PGALVIN GDLLQL+SND +RS +HRVLAN   GPR
Sbjct: 240  VLLQDQVGGLQVLHEKQWVNVNPVPGALVINTGDLLQLVSNDMFRSAKHRVLANHK-GPR 298

Query: 1009 ISVAFFFSTVSEATEKRYGPIKELLSDENPPIYRETLVKDFVGRFTY-------GKPTLE 1167
            +SVA FFS  S    K YGPIKELLS+ENPP Y+ET  +D+    TY       G   L+
Sbjct: 299  VSVASFFSPSSLPPSKLYGPIKELLSEENPPKYKETTARDY---GTYHRAERLGGTSALQ 355

Query: 1168 HFKL 1179
            HFKL
Sbjct: 356  HFKL 359


>ref|XP_002284582.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1 [Vitis
            vinifera]
          Length = 364

 Score =  427 bits (1099), Expect = e-117
 Identities = 210/358 (58%), Positives = 270/358 (75%), Gaps = 4/358 (1%)
 Frame = +1

Query: 118  DYDRLKEVKAFDDTKAGVKGLVDAGVVKLPRIFIRPNGELAKNSVTTNLSDLKIPLIDLE 297
            DYDR  E+KAFD++KAGVKGLVDAGV ++PRIFI+P   L K+    N +  K P+IDL+
Sbjct: 12   DYDRASELKAFDESKAGVKGLVDAGVSQVPRIFIQP---LEKSRANVN-TQFKFPVIDLQ 67

Query: 298  GIDKDEKRRQKVVDEVGRASETWGFFQIVNHGIPTTTLDEIIEGVLRFNEQDTEVKKKFY 477
            G+D D  +R+++VD+V  ASETWGFF ++NHGIP T L+E++ GV RF EQDTE+K++FY
Sbjct: 68   GMDTDRVQRKQIVDKVREASETWGFFNVLNHGIPVTVLEEMMNGVRRFYEQDTELKQEFY 127

Query: 478  TRDYSKKVRFNSNLDLFTSRFACWRDTLSCSMAPTQPQPDELPQVCRDVTIEYTKCATTL 657
            TRD S+K+ +NSN DL+T++ A WRDT  C MAP  P P +LP  CRD+ +EY +    L
Sbjct: 128  TRDVSRKLVYNSNFDLYTAKAASWRDTFYCLMAPHPPNPQDLPAACRDILMEYKEQVMKL 187

Query: 658  GETLLQLLSEALGLKANYLKELDCSKSYTLVTHYSPTCPEPELTMGSESHTDPAFLTVLL 837
            G  LL+L+SEALGL  N+LK +DC++   +V HY P CP+PELT+G+  HTD  FLTVLL
Sbjct: 188  GFKLLELMSEALGLNPNHLKGMDCAEGLAMVCHYYPACPQPELTLGTGFHTDNDFLTVLL 247

Query: 838  QDNIGGLQVFHKNQWVDVQPIPGALVINIGDLLQLISNDKYRSVEHRVLANKTGGPRISV 1017
            QD IGGLQV H++QWVDV P+PGALVIN+GDLLQLI+ND+++SVEHRVLAN T GPR+S+
Sbjct: 248  QDQIGGLQVLHQDQWVDVPPMPGALVINVGDLLQLITNDRFKSVEHRVLANHT-GPRVSI 306

Query: 1018 AFFFSTVSEATEKRYGPIKELLSDENPPIYRETLVKDFVGRF----TYGKPTLEHFKL 1179
            A FFST  + + K YGPIKELLS+ENP  YRET V D+V  F      G   L+ F+L
Sbjct: 307  ACFFSTSVQPSSKLYGPIKELLSEENPARYRETTVSDYVAHFQEKGLEGSTALQLFRL 364


>ref|XP_002284642.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1 [Vitis
            vinifera] gi|147807864|emb|CAN66433.1| hypothetical
            protein VITISV_027452 [Vitis vinifera]
          Length = 365

 Score =  426 bits (1095), Expect = e-117
 Identities = 211/359 (58%), Positives = 267/359 (74%), Gaps = 5/359 (1%)
 Frame = +1

Query: 118  DYDRLKEVKAFDDTKAGVKGLVDAGVVKLPRIFIRPNGELAKNSVTTNLSDLKIPLIDLE 297
            DYDR  E+KAFD++K GVKGLVDAGV K+PR+FI+P      +++ T  +    P++DL+
Sbjct: 13   DYDRASELKAFDESKTGVKGLVDAGVSKVPRMFIQP-----PDNLRTYTTQFNFPVVDLQ 67

Query: 298  GIDKDEKRRQKVVDEVGRASETWGFFQIVNHGIPTTTLDEIIEGVLRFNEQDTEVKKKFY 477
            G+D D  RR K+VD V  ASETWGFF +VNHGIP + L+E++EGVLRF EQDTEVKK+FY
Sbjct: 68   GMDNDPIRRNKIVDMVKDASETWGFFNVVNHGIPVSVLEEMMEGVLRFYEQDTEVKKQFY 127

Query: 478  TRDYS-KKVRFNSNLDLFTSRFACWRDTLSCSMAPTQPQPDELPQVCRDVTIEYTKCATT 654
            TRD S KK+ +NSN DL+T+  A WRDT  C MAP  P P+ELP  CRD+ +EY      
Sbjct: 128  TRDASRKKMVYNSNFDLYTAPAANWRDTFYCLMAPHPPNPEELPAACRDILMEYKDQIMR 187

Query: 655  LGETLLQLLSEALGLKANYLKELDCSKSYTLVTHYSPTCPEPELTMGSESHTDPAFLTVL 834
            LG  L +L+SEALGL  N+LK++DC++  +++ HY P+CP+PELTMG+  H D  FLTVL
Sbjct: 188  LGFKLFELISEALGLNPNHLKDMDCTEGLSILCHYYPSCPQPELTMGTTKHADNDFLTVL 247

Query: 835  LQDNIGGLQVFHKNQWVDVQPIPGALVINIGDLLQLISNDKYRSVEHRVLANKTGGPRIS 1014
            LQD IGGLQV H+ QW+DV P+PGALVIN+GDLLQLI+ND+++SVEHRVLAN   GPR+S
Sbjct: 248  LQDQIGGLQVLHQGQWIDVPPMPGALVINVGDLLQLITNDRFKSVEHRVLANHI-GPRVS 306

Query: 1015 VAFFFSTVSEATEKRYGPIKELLSDENPPIYRETLVKDFVGRFTY----GKPTLEHFKL 1179
            VA FFST  + + K YGPIKELLS+ENPP Y+ET V D+V  F      G   L HF+L
Sbjct: 307  VACFFSTSIQPSSKLYGPIKELLSEENPPKYKETTVGDYVAYFNSKGLDGTSALPHFRL 365


>ref|XP_002315713.1| predicted protein [Populus trichocarpa] gi|222864753|gb|EEF01884.1|
            predicted protein [Populus trichocarpa]
          Length = 379

 Score =  425 bits (1092), Expect = e-116
 Identities = 216/374 (57%), Positives = 274/374 (73%), Gaps = 11/374 (2%)
 Frame = +1

Query: 91   ACEEEKMTLDYDRLKEVKAFDDTKAGVKGLVDAGVVKLPRIFIRPNGELAKNSVTTNLSD 270
            A E       YDR  E+KAFD+TKAGVKGLVDAGV K+P+IFI P+  L   +++T+ + 
Sbjct: 7    AAEISVQETSYDRGSELKAFDETKAGVKGLVDAGVSKVPQIFIHPSERLEHRTLSTSKNP 66

Query: 271  LKIPLIDLEGIDKDEKRRQKVVDEVGRASETWGFFQIVNHGIPTTTLDEIIEGVLRFNEQ 450
            + + +IDLE IDKD  RR+ +VD+V  ASETWGFFQ+VNHGIP   L+E+  GV RF EQ
Sbjct: 67   VNVTVIDLEAIDKDPIRRKGIVDKVRDASETWGFFQVVNHGIPVGVLEEMDAGVRRFFEQ 126

Query: 451  DTEVKKKFYTRDYSKKVRFNSNLDLFTSRFACWRDTLSCSMAPTQPQPDELPQVCRDVTI 630
            D EVKKKFYTRD +K+  +NSN DL T+  A WRDT    MAP  P+P+ELP  CRD+ +
Sbjct: 127  DVEVKKKFYTRDVTKRFVYNSNFDLHTAPVANWRDTFFSYMAPYPPKPEELPGACRDIMM 186

Query: 631  EYTKCATTLGETLLQLLSEALGLKANYLKELDCSKSYTLVTHYSPTCPEPELTMGSESHT 810
            E++K  T+LG +L  LLSEALGLK ++L+++DC++   L++HY P CPEPELT+G+  H+
Sbjct: 187  EFSKQVTSLGISLFGLLSEALGLKTDHLEKMDCAEGLALISHYYPACPEPELTLGTSKHS 246

Query: 811  DPAFLTVLLQDNIGGLQVFHKNQWVDVQPIPGALVINIGDLLQ-------LISNDKYRSV 969
            D  FLTVLLQD IGGLQ+ H++QWVD+ P+PGALVINIGDL+Q       LISNDK++SV
Sbjct: 247  DNDFLTVLLQDQIGGLQMLHQDQWVDIPPVPGALVINIGDLMQASFSFISLISNDKFKSV 306

Query: 970  EHRVLANKTGGPRISVAFFFSTVSEATEKRYGPIKELLSDENPPIYRETLVKDFVGRF-- 1143
            EHRVLAN+  GPRISVA FFST  + + K YGPIKELLS+ NPPIYRET V +++  F  
Sbjct: 307  EHRVLANRV-GPRISVACFFSTSFQPSSKLYGPIKELLSEYNPPIYRETTVNEYLSYFYD 365

Query: 1144 --TYGKPTLEHFKL 1179
                G   L HFKL
Sbjct: 366  HGLDGTSPLIHFKL 379


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