BLASTX nr result

ID: Coptis24_contig00010499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010499
         (669 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142070.1| PREDICTED: actin-like [Cucumis sativus] gi|4...   237   2e-60
ref|XP_004136568.1| PREDICTED: actin-like [Cucumis sativus] gi|4...   237   2e-60
gb|ADK20401.1| actin [Citrus maxima]                                  237   2e-60
gb|AAC49652.1| actin [Striga asiatica]                                237   2e-60
gb|AFP43696.1| actin4, partial [Eriobotrya japonica]                  237   2e-60

>ref|XP_004142070.1| PREDICTED: actin-like [Cucumis sativus]
           gi|449516439|ref|XP_004165254.1| PREDICTED: actin-like
           [Cucumis sativus]
          Length = 377

 Score =  237 bits (604), Expect = 2e-60
 Identities = 117/117 (100%), Positives = 117/117 (100%)
 Frame = +3

Query: 3   EVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEIT 182
           EVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEIT
Sbjct: 261 EVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEIT 320

Query: 183 ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 353
           ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF
Sbjct: 321 ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377


>ref|XP_004136568.1| PREDICTED: actin-like [Cucumis sativus]
           gi|449511328|ref|XP_004163927.1| PREDICTED: actin-like
           [Cucumis sativus]
          Length = 377

 Score =  237 bits (604), Expect = 2e-60
 Identities = 117/117 (100%), Positives = 117/117 (100%)
 Frame = +3

Query: 3   EVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEIT 182
           EVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEIT
Sbjct: 261 EVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEIT 320

Query: 183 ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 353
           ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF
Sbjct: 321 ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377


>gb|ADK20401.1| actin [Citrus maxima]
          Length = 377

 Score =  237 bits (604), Expect = 2e-60
 Identities = 117/117 (100%), Positives = 117/117 (100%)
 Frame = +3

Query: 3   EVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEIT 182
           EVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEIT
Sbjct: 261 EVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEIT 320

Query: 183 ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 353
           ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF
Sbjct: 321 ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377


>gb|AAC49652.1| actin [Striga asiatica]
          Length = 377

 Score =  237 bits (604), Expect = 2e-60
 Identities = 117/117 (100%), Positives = 117/117 (100%)
 Frame = +3

Query: 3   EVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEIT 182
           EVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEIT
Sbjct: 261 EVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEIT 320

Query: 183 ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 353
           ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF
Sbjct: 321 ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377


>gb|AFP43696.1| actin4, partial [Eriobotrya japonica]
          Length = 174

 Score =  237 bits (604), Expect = 2e-60
 Identities = 117/117 (100%), Positives = 117/117 (100%)
 Frame = +3

Query: 3   EVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEIT 182
           EVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEIT
Sbjct: 58  EVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEIT 117

Query: 183 ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 353
           ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF
Sbjct: 118 ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 174


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