BLASTX nr result

ID: Coptis24_contig00010488 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010488
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299877.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34
ref|XP_003632149.1| PREDICTED: U-box domain-containing protein 3...   149   2e-34
emb|CBI16147.3| unnamed protein product [Vitis vinifera]              149   2e-34
ref|XP_003547023.1| PREDICTED: U-box domain-containing protein 3...   144   6e-33
ref|XP_003539086.1| PREDICTED: U-box domain-containing protein 3...   143   2e-32

>ref|XP_002299877.1| predicted protein [Populus trichocarpa] gi|222847135|gb|EEE84682.1|
           predicted protein [Populus trichocarpa]
          Length = 736

 Score =  150 bits (379), Expect = 1e-34
 Identities = 74/121 (61%), Positives = 90/121 (74%)
 Frame = +1

Query: 1   GKSNEKSVDLLKWTFRHFENRDIGLVHVHQPSTTIPTLLGKLPATQANEEMVKGYRREEE 180
           G S EK+V LL W F     R I L+HVH+PS  IPTLLGKLPA+QAN E+V  +RREE 
Sbjct: 23  GNSIEKAVSLLNWVFESLGTRQICLLHVHRPSPLIPTLLGKLPASQANAEVVSAFRREEN 82

Query: 181 EQCQKLLLNYLNICSKAKVKATIFTAESEQVHKGIVELVRKHRIRKLVIGAASDNCLKVK 360
           E+ +KL   YL IC +AKV+ATI T ES+QVHKGIVELV +H +RKLV+G   +NC+KVK
Sbjct: 83  ERAKKLFDYYLIICRRAKVEATIVTIESDQVHKGIVELVNRHGVRKLVMGTVKENCMKVK 142

Query: 361 K 363
           K
Sbjct: 143 K 143


>ref|XP_003632149.1| PREDICTED: U-box domain-containing protein 33-like [Vitis vinifera]
          Length = 836

 Score =  149 bits (376), Expect = 2e-34
 Identities = 76/121 (62%), Positives = 93/121 (76%), Gaps = 1/121 (0%)
 Frame = +1

Query: 1   GKSNEKSVDLLKWTFRHFENRDIGLVHVHQPSTTIPTLLGKLPATQANEEMVKGYRREEE 180
           GKS EK+  LL WTFR F + +I LVHVHQPS  IPTLLGKLPA+QAN E+V  +RREE+
Sbjct: 57  GKSVEKAESLLHWTFRRFGSCEICLVHVHQPSPLIPTLLGKLPASQANGEVVSAHRREEK 116

Query: 181 EQCQKLLLNYLNICSKAKVKATIFTAESEQVHKGIVELVRKHRIRKLVI-GAASDNCLKV 357
           +Q  KLLLNY NICS+ KVK +I T E++ V KGIV+LV +H IRKLV+ G   +NC+KV
Sbjct: 117 KQTNKLLLNYSNICSRMKVKPSIITIEADHVQKGIVDLVNRHGIRKLVMGGTVPENCMKV 176

Query: 358 K 360
           K
Sbjct: 177 K 177


>emb|CBI16147.3| unnamed protein product [Vitis vinifera]
          Length = 820

 Score =  149 bits (376), Expect = 2e-34
 Identities = 76/121 (62%), Positives = 93/121 (76%), Gaps = 1/121 (0%)
 Frame = +1

Query: 1   GKSNEKSVDLLKWTFRHFENRDIGLVHVHQPSTTIPTLLGKLPATQANEEMVKGYRREEE 180
           GKS EK+  LL WTFR F + +I LVHVHQPS  IPTLLGKLPA+QAN E+V  +RREE+
Sbjct: 57  GKSVEKAESLLHWTFRRFGSCEICLVHVHQPSPLIPTLLGKLPASQANGEVVSAHRREEK 116

Query: 181 EQCQKLLLNYLNICSKAKVKATIFTAESEQVHKGIVELVRKHRIRKLVI-GAASDNCLKV 357
           +Q  KLLLNY NICS+ KVK +I T E++ V KGIV+LV +H IRKLV+ G   +NC+KV
Sbjct: 117 KQTNKLLLNYSNICSRMKVKPSIITIEADHVQKGIVDLVNRHGIRKLVMGGTVPENCMKV 176

Query: 358 K 360
           K
Sbjct: 177 K 177


>ref|XP_003547023.1| PREDICTED: U-box domain-containing protein 33-like [Glycine max]
          Length = 780

 Score =  144 bits (364), Expect = 6e-33
 Identities = 69/121 (57%), Positives = 91/121 (75%)
 Frame = +1

Query: 1   GKSNEKSVDLLKWTFRHFENRDIGLVHVHQPSTTIPTLLGKLPATQANEEMVKGYRREEE 180
           GKS +K+V LL+WT  HF N +I +VH +QPS TIPTLLGKLPA+QA+  +V  +R+ E 
Sbjct: 10  GKSLDKAVPLLRWTLNHFRNAEIVIVHAYQPSLTIPTLLGKLPASQASPAVVSAFRKAER 69

Query: 181 EQCQKLLLNYLNICSKAKVKATIFTAESEQVHKGIVELVRKHRIRKLVIGAASDNCLKVK 360
           EQ  KLL  YL+IC  A+V+A++   E++QV KGIV+LV KH I KLVIGA  +NC+KVK
Sbjct: 70  EQTVKLLDKYLSICRAARVRASVIVTEADQVQKGIVDLVIKHNIEKLVIGAIPENCMKVK 129

Query: 361 K 363
           +
Sbjct: 130 R 130


>ref|XP_003539086.1| PREDICTED: U-box domain-containing protein 33-like [Glycine max]
          Length = 776

 Score =  143 bits (360), Expect = 2e-32
 Identities = 69/121 (57%), Positives = 90/121 (74%)
 Frame = +1

Query: 1   GKSNEKSVDLLKWTFRHFENRDIGLVHVHQPSTTIPTLLGKLPATQANEEMVKGYRREEE 180
           GKS +K+  LL+W F HF    I L+HVHQPST IPTLLGKLPA+QA+ E+V  YR EE+
Sbjct: 17  GKSLKKAATLLQWCFTHFSKPQIFLLHVHQPSTMIPTLLGKLPASQASPEVVSAYRIEEK 76

Query: 181 EQCQKLLLNYLNICSKAKVKATIFTAESEQVHKGIVELVRKHRIRKLVIGAASDNCLKVK 360
           E  ++LL  YL++C  AKVKA+    E++QV KGIV+LV  H +RKLVIGA  +NC+K+K
Sbjct: 77  EDTKRLLEKYLSLCRAAKVKASSVIGEADQVQKGIVDLVTVHNVRKLVIGAIPENCMKIK 136

Query: 361 K 363
           +
Sbjct: 137 R 137


Top