BLASTX nr result

ID: Coptis24_contig00010481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010481
         (1642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276294.1| PREDICTED: uncharacterized protein LOC100250...   582   e-163
ref|XP_002510523.1| nucleic acid binding protein, putative [Rici...   560   e-157
ref|XP_002301980.1| predicted protein [Populus trichocarpa] gi|2...   543   e-152
ref|XP_003550423.1| PREDICTED: uncharacterized protein LOC100816...   521   e-145
ref|XP_003545035.1| PREDICTED: uncharacterized protein LOC100782...   514   e-143

>ref|XP_002276294.1| PREDICTED: uncharacterized protein LOC100250572 [Vitis vinifera]
          Length = 419

 Score =  582 bits (1500), Expect = e-163
 Identities = 296/401 (73%), Positives = 328/401 (81%), Gaps = 4/401 (0%)
 Frame = +2

Query: 122  PKTRQTST----PTRKKKVQQTPAPSSWEQIKNLLTCKQVEGTQVHDPSKNNVAGYSKLX 289
            P+  +T+T    P+++K+ QQ   PSSW QIKNLLTCKQ+EG+QVHDPSKN   GYSKL 
Sbjct: 28   PEASETNTKKQQPSKRKRKQQKQ-PSSWNQIKNLLTCKQIEGSQVHDPSKNP-GGYSKLG 85

Query: 290  XXXXXXXXVRDVVHGNTRVVHRADNSPESSKSSVGQETRLLSRNKPLNGPSTLSTTSGSM 469
                     RDVVHGNTRVVHRADNSPESS  SVGQET LLSR       S+  + S S+
Sbjct: 86   SSCGSICSFRDVVHGNTRVVHRADNSPESS--SVGQETGLLSRKTVSGSTSSTRSLSSSV 143

Query: 470  RSNAACXXXXXXXXXXXXVQFRKLSGCYECHMIVDPSRYPVPRSTICRCTECGEIFPKVE 649
            RSNA+             +QFRKLSGCYECHMIVDP+RYP PR+TIC C+ECGE+FPK E
Sbjct: 144  RSNASATYTSSSRG----MQFRKLSGCYECHMIVDPNRYPSPRTTICACSECGEVFPKTE 199

Query: 650  SLELHQAVRHAVKELGPEDSGRNIVEIIFKSSWLKKDNPICKIERILKVHNTQRTIQRFE 829
            SLELHQAVRHAV ELGPEDSGRNIVEIIFKSSWLKKDNPICKIERILKVHNTQRTIQRFE
Sbjct: 200  SLELHQAVRHAVSELGPEDSGRNIVEIIFKSSWLKKDNPICKIERILKVHNTQRTIQRFE 259

Query: 830  DCRDAVKARANMNTKKNPRCAADGNELLRFYCTTLTCALGARGSSNLCGSIPGCGVCTII 1009
            +CRDAVK RAN NTKKNPRCAADGNELLRF+CTTLTCALG+RGSS+LCGS+PGCGVCTII
Sbjct: 260  ECRDAVKVRANNNTKKNPRCAADGNELLRFHCTTLTCALGSRGSSSLCGSVPGCGVCTII 319

Query: 1010 RHGFSSKAHDCKGVRTTASSGRAHDGLNCTDGRRAMLVCRVIAGRVRRISDDAPLDEGIL 1189
            RHGF  KA + KGVRTT SSGRAHD L CTDGRRAMLVCRVIAGRV+R++DDAP DE   
Sbjct: 320  RHGFQGKAGEAKGVRTTDSSGRAHDCLPCTDGRRAMLVCRVIAGRVKRMADDAP-DEDGA 378

Query: 1190 SVGSYDSIGGCAGIYSDLEELVIVNPRAILPCFVVIYKALD 1312
            S GSYDS+ G +GIYS+LE+L + NPRAILPCFVVIYKALD
Sbjct: 379  SAGSYDSVAGYSGIYSNLEDLFVFNPRAILPCFVVIYKALD 419


>ref|XP_002510523.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223551224|gb|EEF52710.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 406

 Score =  560 bits (1442), Expect = e-157
 Identities = 287/398 (72%), Positives = 317/398 (79%), Gaps = 4/398 (1%)
 Frame = +2

Query: 131  RQTSTPTRKKKVQQTPAPSSWEQIKNLLTCKQVEGTQVHDPSKN-NVAGYSKLXXXXXXX 307
            +Q S    K++ Q+   PSSW+QIKNLLTCKQ+EG+ VHDPSKN N  GYSKL       
Sbjct: 15   KQPSKRKGKQQKQKQKQPSSWDQIKNLLTCKQIEGSSVHDPSKNSNNIGYSKLGSSCSSI 74

Query: 308  XXVRDVVHGNTRVVHRADNSPESSKSSVGQETRLLSRNKPLNGPSTLSTTSGSMRSNAAC 487
               RD+VHGNTRVVHRADNSPESS  +VGQET LLSR     G S+  T  GS RSN   
Sbjct: 75   CSFRDIVHGNTRVVHRADNSPESS--TVGQETGLLSRKA--TGGSSTRTLGGSGRSNGGA 130

Query: 488  XXXXXXXXXXXXVQFRKLSGCYECHMIVDPSRYPVPRSTICRCTECGEIFPKVESLELHQ 667
                        +QFRKLSGCYECHMIVDPSRYP PR+TIC C +CGE+FPK ESLELHQ
Sbjct: 131  TYSSHVSSSRG-MQFRKLSGCYECHMIVDPSRYPAPRTTICTCAQCGEVFPKTESLELHQ 189

Query: 668  AVRHAVKELGPEDSGRNIVEIIFKSSWLKKDNPICKIERILKVHNTQRTIQRFEDCRDAV 847
             VRHAV ELGPEDSGRNIVEIIFKSSWLKKDNPICKIERILKVHNTQRTIQRFEDCRDAV
Sbjct: 190  KVRHAVSELGPEDSGRNIVEIIFKSSWLKKDNPICKIERILKVHNTQRTIQRFEDCRDAV 249

Query: 848  KARANMNTKKNPRCAADGNELLRFYCTTLTCALGARGSSNLCGSIPGCGVCTIIRHGFSS 1027
            K RA  +TKKNPRCAADGNELLRF+CTTL+C+LGARGSS+LCGSIP CGVCTIIRHGF  
Sbjct: 250  KTRALNSTKKNPRCAADGNELLRFHCTTLSCSLGARGSSSLCGSIPCCGVCTIIRHGFQG 309

Query: 1028 KAHDCKGVRTTASSGRAHDG-LNCTDGRRAMLVCRVIAGRVRRISDDAP--LDEGILSVG 1198
            K  +CKGVRTTASSGRAHD  L CTDGRRAMLVCRVIAGRV+R++DD P   +E + + G
Sbjct: 310  K--ECKGVRTTASSGRAHDSLLGCTDGRRAMLVCRVIAGRVKRVADDTPPAEEEALAAAG 367

Query: 1199 SYDSIGGCAGIYSDLEELVIVNPRAILPCFVVIYKALD 1312
            SYDS+ G AGIYS+LEEL + NPRAILPCFVVIY AL+
Sbjct: 368  SYDSVAGYAGIYSNLEELFVFNPRAILPCFVVIYSALE 405


>ref|XP_002301980.1| predicted protein [Populus trichocarpa] gi|222843706|gb|EEE81253.1|
            predicted protein [Populus trichocarpa]
          Length = 405

 Score =  543 bits (1400), Expect = e-152
 Identities = 282/400 (70%), Positives = 319/400 (79%), Gaps = 4/400 (1%)
 Frame = +2

Query: 125  KTRQTSTPTRK--KKVQQTPAPSSWEQIKNLLTCKQVEGTQVHDPSKNNVAGYSKLXXXX 298
            + +Q S   RK  K+ ++   PSSW+QIKNLLTCKQ+EG++VHDPSKN + GYSKL    
Sbjct: 14   RQKQPSRCKRKLQKEKEKEKQPSSWDQIKNLLTCKQIEGSRVHDPSKNPI-GYSKLGSSC 72

Query: 299  XXXXXVRDVVHGNTRVVHRADNSPESSKSSVGQETRLLSRNKPLNGPSTLSTTSGSMRSN 478
                  +DVVHGNTRVVHRADNSPESS  ++GQET LLSR     G S+  + + S RSN
Sbjct: 73   SSICSFKDVVHGNTRVVHRADNSPESS--TLGQETGLLSRKGVSTGSSSTRSLTSSGRSN 130

Query: 479  AACXXXXXXXXXXXXVQFRKLSGCYECHMIVDPSRYPVPRSTICRCTECGEIFPKVESLE 658
            +              +QFRKLSGCYECHMIVDPSRYP  R+TI  CT+CGE+FPK+ESLE
Sbjct: 131  SGVTCSSSSRG----MQFRKLSGCYECHMIVDPSRYPSARTTISACTQCGEVFPKIESLE 186

Query: 659  LHQAVRHAVKELGPEDSGRNIVEIIFKSSWLKKDNPICKIERILKVHNTQRTIQRFEDCR 838
            LHQ VRHAV ELGPEDSGRNIVEIIFKSSWLKKDNPICKIERILKVHNTQRTIQRFEDCR
Sbjct: 187  LHQKVRHAVSELGPEDSGRNIVEIIFKSSWLKKDNPICKIERILKVHNTQRTIQRFEDCR 246

Query: 839  DAVKARANMNTKKNPRCAADGNELLRFYCTTLTCALGARGSSNLCGSIPGCGVCTIIRHG 1018
            DAVK RA  +TKKNPRCAADGNELLRF+CTTLTC+LG+ GSS+LCGSIP CGVCTIIRHG
Sbjct: 247  DAVKTRALNSTKKNPRCAADGNELLRFHCTTLTCSLGSLGSSSLCGSIPVCGVCTIIRHG 306

Query: 1019 FSSKAHDCKGVRTTASSGRAHDGL-NCTDGRRAMLVCRVIAGRVRRISDDA-PLDEGILS 1192
            F  +  +CKGV TTASSGRAHD L  CTDGRRAMLVCRVIAGRV+R+++DA P +E   S
Sbjct: 307  F--QGIECKGVSTTASSGRAHDSLWGCTDGRRAMLVCRVIAGRVKRVAEDALPPEEDGAS 364

Query: 1193 VGSYDSIGGCAGIYSDLEELVIVNPRAILPCFVVIYKALD 1312
             GSYDS+ G AGIYS LEEL + NPRAILPCFVVIYKAL+
Sbjct: 365  AGSYDSVAGGAGIYSSLEELSVFNPRAILPCFVVIYKALE 404


>ref|XP_003550423.1| PREDICTED: uncharacterized protein LOC100816726 [Glycine max]
          Length = 417

 Score =  521 bits (1341), Expect = e-145
 Identities = 272/405 (67%), Positives = 310/405 (76%), Gaps = 11/405 (2%)
 Frame = +2

Query: 122  PKTRQTSTPTRKKKVQQTPAPSSWEQIKNLLTCKQVEGTQVHDPSKNNVAGYSKLXXXXX 301
            PK      P ++++ Q+    SSW+QIKNLLTCKQ+EG++VHDPSK  V+GYSKL     
Sbjct: 15   PKRHHKRKPQQQQQQQKQKPASSWDQIKNLLTCKQIEGSRVHDPSKV-VSGYSKLGSSCS 73

Query: 302  XXXXVRDVVHGNTRVVHRADNS-PESSKSSVGQETRLLSRNKPLNGPSTLSTTSGSMRSN 478
                 RDVVHGNTRVVHR+DNS PESS  S+GQET  L   KP+   +T +T S +    
Sbjct: 74   SICSFRDVVHGNTRVVHRSDNSSPESS--SLGQETNGLLTRKPVTTTTTTTTRSSAKSHG 131

Query: 479  AACXXXXXXXXXXXXVQFRKLSGCYECHMIVDPSRYPVPRSTICRCTECGEIFPKVESLE 658
             A             +QFRKLSGCYECHMI+DPSR P+ RST+C C+ CGE+FPK+ESLE
Sbjct: 132  GATYTSSSSSRG---MQFRKLSGCYECHMIIDPSRLPIARSTVCACSHCGEVFPKMESLE 188

Query: 659  LHQAVRHAVKELGPEDSGRNIVEIIFKSSWLKKDNPICKIERILKVHNTQRTIQRFEDCR 838
            LHQAVRHAV ELGPEDSGRNIVEIIFKSSWLKKDNPICKIERILKVHNTQRTIQRFE+CR
Sbjct: 189  LHQAVRHAVSELGPEDSGRNIVEIIFKSSWLKKDNPICKIERILKVHNTQRTIQRFEECR 248

Query: 839  DAVKARANMNTKKNPRCAADGNELLRFYCTTLTCALGARGSSNLCGSIPG-CGVCTIIRH 1015
            D VK RA  +TKKNPRCAADGNELLRF+CTTLTCALGARGSS+LC S+ G CGVCTIIRH
Sbjct: 249  DTVKNRALGSTKKNPRCAADGNELLRFHCTTLTCALGARGSSSLCASVHGSCGVCTIIRH 308

Query: 1016 GF--------SSKAHDCKGVRTTASSGRAHDGLNCTDG-RRAMLVCRVIAGRVRRISDDA 1168
            GF        S      KGVRTTASSGRAHD + C D  RRAMLVCRVIAGRV+R+ +DA
Sbjct: 309  GFQGGSCGGGSGDHGKAKGVRTTASSGRAHDSVVCGDATRRAMLVCRVIAGRVKRVVEDA 368

Query: 1169 PLDEGILSVGSYDSIGGCAGIYSDLEELVIVNPRAILPCFVVIYK 1303
            P +E  +SV SYDS+ G AGIYS+LEELV+ NP+AILPCFVVIYK
Sbjct: 369  PSEEEHVSVASYDSVAGYAGIYSNLEELVVFNPKAILPCFVVIYK 413


>ref|XP_003545035.1| PREDICTED: uncharacterized protein LOC100782665 [Glycine max]
          Length = 414

 Score =  514 bits (1323), Expect = e-143
 Identities = 268/402 (66%), Positives = 306/402 (76%), Gaps = 8/402 (1%)
 Frame = +2

Query: 122  PKTRQTSTPTRKKKVQQTPAPSSWEQIKNLLTCKQVEGTQVHDPSKNNVAGYSKLXXXXX 301
            P+ +Q     ++K+ Q+    SSW+QIKNLLTCKQ+E ++VHDPSK  + GYSKL     
Sbjct: 22   PQQQQQKQKQKQKQKQKQKPASSWDQIKNLLTCKQMEESRVHDPSK--ITGYSKLGSSCS 79

Query: 302  XXXXVRDVVHGNTRVVHRADNS-PESSKSSVGQETRLLSRNKPLNGPSTLSTTSGSMRSN 478
                 RDVVHGNTRVVHR+DNS PESS  S+GQET  L   KP+   +T +T S      
Sbjct: 80   SICSFRDVVHGNTRVVHRSDNSSPESS--SLGQETNGLLTRKPV---TTTTTRSAKSNGG 134

Query: 479  AACXXXXXXXXXXXXVQFRKLSGCYECHMIVDPSRYPVPRSTICRCTECGEIFPKVESLE 658
            A C            +QFRKLSGCYECHMI+DPSR P+ RST+C C+ CGE+FPK+ESLE
Sbjct: 135  ATCTSSSSSSRG---MQFRKLSGCYECHMIIDPSRLPIARSTVCACSHCGEVFPKMESLE 191

Query: 659  LHQAVRHAVKELGPEDSGRNIVEIIFKSSWLKKDNPICKIERILKVHNTQRTIQRFEDCR 838
            LHQAVRHAV ELGPEDSGRNIVEIIFKSSWLKKDNPICKIERILKVHNTQRTIQRFE+CR
Sbjct: 192  LHQAVRHAVSELGPEDSGRNIVEIIFKSSWLKKDNPICKIERILKVHNTQRTIQRFEECR 251

Query: 839  DAVKARANMNTKKNPRCAADGNELLRFYCTTLTCALGARGSSNLCGSIPGCGVCTIIRHG 1018
            D VK RA  +TKKNPRCAADGNELLRF+CTTLTCALGARGSS+LC S+PGC VCTIIRHG
Sbjct: 252  DTVKNRALGSTKKNPRCAADGNELLRFHCTTLTCALGARGSSSLCASVPGCSVCTIIRHG 311

Query: 1019 FSSKAHD------CKGVRTTASSGRAHDGLNCTDG-RRAMLVCRVIAGRVRRISDDAPLD 1177
            F             KGVRTTASSGRAHD + C D  RRAMLVCRVIAGRV+R+ +DAP +
Sbjct: 312  FQGGCGGGGDHARAKGVRTTASSGRAHDSVVCGDATRRAMLVCRVIAGRVKRVVEDAPSE 371

Query: 1178 EGILSVGSYDSIGGCAGIYSDLEELVIVNPRAILPCFVVIYK 1303
            E  +   SYDS+ G AGIYS+LEELV+ NP+AILPCFVVIYK
Sbjct: 372  EEHV---SYDSVAGYAGIYSNLEELVVFNPKAILPCFVVIYK 410


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