BLASTX nr result

ID: Coptis24_contig00010474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010474
         (1169 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266963.1| PREDICTED: plastid division protein PDV1-lik...   309   1e-81
emb|CBI22558.3| unnamed protein product [Vitis vinifera]              308   2e-81
ref|XP_002331822.1| predicted protein [Populus trichocarpa] gi|2...   305   1e-80
ref|XP_002318370.1| predicted protein [Populus trichocarpa] gi|2...   302   9e-80
gb|ABK94742.1| unknown [Populus trichocarpa]                          300   6e-79

>ref|XP_002266963.1| PREDICTED: plastid division protein PDV1-like [Vitis vinifera]
          Length = 277

 Score =  309 bits (791), Expect = 1e-81
 Identities = 169/278 (60%), Positives = 208/278 (74%), Gaps = 2/278 (0%)
 Frame = -2

Query: 1036 EMETSEEIEAVLEKIWDIHDKLSDAIHSISRSHFLNTVKTLKKTDDIFFTDKSNKSRDRS 857
            EME  EEIEA+LEKIWD+HDKLSDAIHSISR HFLN++K+L+K+D    +   N   +  
Sbjct: 4    EMEI-EEIEAILEKIWDLHDKLSDAIHSISRFHFLNSIKSLRKSDK---SKPLNDVDENR 59

Query: 856  SGYVFMKDVRMVADESAIAEAKSLNAIRTALENLEDQLEFFHTVQLQQRAERDAAIARLE 677
             G+V+ KD R+  D+ AI EAKSLNAIRTALENLEDQLEFFHTVQ+ Q+AERDAAIARLE
Sbjct: 60   FGFVYAKDFRVEDDDLAIQEAKSLNAIRTALENLEDQLEFFHTVQVHQQAERDAAIARLE 119

Query: 676  QSRIVLAMRLADHHGKKYKVIEEALAFVGDVQNAGRFISPENLFESPRSQSGDISKSHER 497
            QSRIVLA+RL++HHGKKYKVIEEA+AFVGDV++AG F+ P+NLF  P S  G     HE 
Sbjct: 120  QSRIVLAIRLSEHHGKKYKVIEEAMAFVGDVRDAGPFVLPDNLFGPPVSPPGKNVAPHEE 179

Query: 496  KRSSILMRVLSSSFTFAKRSLNLEQMGGVLGHAALVAVSMFALLQFQQVSSRNSFVVESP 317
            KRS+ L++VL S F F K+SL L+ MGG+LG+AALVAVSM ALL   QV+ ++  V+E P
Sbjct: 180  KRSNFLIKVLISCFNFGKKSLKLDHMGGILGNAALVAVSMLALLHLNQVTYKDKIVLEPP 239

Query: 316  QMEGDIFYGKSS--KISQREVSSSNGFVKNLDVLAARG 209
            Q   D  Y   +  + S+ E SS +  +  LDVL ARG
Sbjct: 240  QKREDNIYRNRNVKRTSRVESSSLSSELNQLDVLYARG 277


>emb|CBI22558.3| unnamed protein product [Vitis vinifera]
          Length = 273

 Score =  308 bits (789), Expect = 2e-81
 Identities = 166/273 (60%), Positives = 205/273 (75%), Gaps = 2/273 (0%)
 Frame = -2

Query: 1021 EEIEAVLEKIWDIHDKLSDAIHSISRSHFLNTVKTLKKTDDIFFTDKSNKSRDRSSGYVF 842
            EEIEA+LEKIWD+HDKLSDAIHSISR HFLN++K+L+K+D    +   N   +   G+V+
Sbjct: 4    EEIEAILEKIWDLHDKLSDAIHSISRFHFLNSIKSLRKSDK---SKPLNDVDENRFGFVY 60

Query: 841  MKDVRMVADESAIAEAKSLNAIRTALENLEDQLEFFHTVQLQQRAERDAAIARLEQSRIV 662
             KD R+  D+ AI EAKSLNAIRTALENLEDQLEFFHTVQ+ Q+AERDAAIARLEQSRIV
Sbjct: 61   AKDFRVEDDDLAIQEAKSLNAIRTALENLEDQLEFFHTVQVHQQAERDAAIARLEQSRIV 120

Query: 661  LAMRLADHHGKKYKVIEEALAFVGDVQNAGRFISPENLFESPRSQSGDISKSHERKRSSI 482
            LA+RL++HHGKKYKVIEEA+AFVGDV++AG F+ P+NLF  P S  G     HE KRS+ 
Sbjct: 121  LAIRLSEHHGKKYKVIEEAMAFVGDVRDAGPFVLPDNLFGPPVSPPGKNVAPHEEKRSNF 180

Query: 481  LMRVLSSSFTFAKRSLNLEQMGGVLGHAALVAVSMFALLQFQQVSSRNSFVVESPQMEGD 302
            L++VL S F F K+SL L+ MGG+LG+AALVAVSM ALL   QV+ ++  V+E PQ   D
Sbjct: 181  LIKVLISCFNFGKKSLKLDHMGGILGNAALVAVSMLALLHLNQVTYKDKIVLEPPQKRED 240

Query: 301  IFYGKSS--KISQREVSSSNGFVKNLDVLAARG 209
              Y   +  + S+ E SS +  +  LDVL ARG
Sbjct: 241  NIYRNRNVKRTSRVESSSLSSELNQLDVLYARG 273


>ref|XP_002331822.1| predicted protein [Populus trichocarpa] gi|222875060|gb|EEF12191.1|
            predicted protein [Populus trichocarpa]
          Length = 276

 Score =  305 bits (781), Expect = 1e-80
 Identities = 170/281 (60%), Positives = 211/281 (75%), Gaps = 10/281 (3%)
 Frame = -2

Query: 1021 EEIEAVLEKIWDIHDKLSDAIHSISRSHFLNTVKTLKKTD-------DIFFTDKSNKSRD 863
            EEIEAVLEKIWD+HDKLSDAIHSISRSHFL+++K+LK  +       D+ F + +N    
Sbjct: 4    EEIEAVLEKIWDLHDKLSDAIHSISRSHFLSSIKSLKTNNKKLNSESDVGFEENNNS--- 60

Query: 862  RSSGYVFMKDVRMVADE-SAIAEAKSLNAIRTALENLEDQLEFFHTVQLQQRAERDAAIA 686
            R+SG+VF+KD  +  ++ SAI EAKSLN+IRTALENLEDQLEFFHTVQ+ QRAERDAAIA
Sbjct: 61   RASGFVFVKDFGVHDNDLSAIQEAKSLNSIRTALENLEDQLEFFHTVQIHQRAERDAAIA 120

Query: 685  RLEQSRIVLAMRLADHHGKKYKVIEEALAFVGDVQNAGRFISPENLFESPRSQSGDISKS 506
            RLEQSRI+LA+RLA+HHGKKYKVIEEALAFVGDV +A RF+S ENL+ SP S SG+    
Sbjct: 121  RLEQSRIILAVRLAEHHGKKYKVIEEALAFVGDVNDASRFVSRENLYGSPTSPSGENLVR 180

Query: 505  HERKRSSILMRVLSSSFTFAKRSLNLEQMGGVLGHAALVAVSMFALLQFQQVSSRNSFVV 326
            HE K  + +++VL SSF FAK+SL L+ MGG+LG+AAL  VSM A+L   QV+ +     
Sbjct: 181  HEGKGPNTVIKVLLSSFEFAKKSLKLDLMGGILGNAALFTVSMIAMLHLHQVAYK----- 235

Query: 325  ESPQMEGDIFYG--KSSKISQREVSSSNGFVKNLDVLAARG 209
            + P  + D+ Y      K+S  E SSSNG + +LDVL ARG
Sbjct: 236  DHPNKQEDLLYSNRNGKKVSGLEGSSSNGSLNHLDVLLARG 276


>ref|XP_002318370.1| predicted protein [Populus trichocarpa] gi|222859043|gb|EEE96590.1|
            predicted protein [Populus trichocarpa]
          Length = 286

 Score =  302 bits (774), Expect = 9e-80
 Identities = 167/284 (58%), Positives = 211/284 (74%), Gaps = 13/284 (4%)
 Frame = -2

Query: 1021 EEIEAVLEKIWDIHDKLSDAIHSISRSHFLNTVKTLKKT-----------DDIFFTDKSN 875
            EEIEAVLEKIWD+HDKLSDAIHSISRSHFL+++K+LK T           +D+ F D ++
Sbjct: 8    EEIEAVLEKIWDLHDKLSDAIHSISRSHFLHSIKSLKTTTTTTNKKLNNENDVGFEDNNS 67

Query: 874  KSRDRSSGYVFMKDVRMVADE-SAIAEAKSLNAIRTALENLEDQLEFFHTVQLQQRAERD 698
             S +R+SG+VF KD R+  ++ S I EAKSLN+IRTALENLEDQLEFFHTVQ+ QRAE D
Sbjct: 68   NSNNRASGFVFFKDFRVDGNDLSTIQEAKSLNSIRTALENLEDQLEFFHTVQIHQRAEID 127

Query: 697  AAIARLEQSRIVLAMRLADHHGKKYKVIEEALAFVGDVQNAGRFISPENLFESPRSQSGD 518
            AAIARLEQSRI+LAMRLA+HHGKKYKVIEEALAFVGDV +A  F+SPENL+ SP S  G+
Sbjct: 128  AAIARLEQSRIILAMRLAEHHGKKYKVIEEALAFVGDVHDASHFVSPENLYGSPTSPLGE 187

Query: 517  ISKSHERKRSSILMRVLSSSFTFAKRSLNLEQMGGVLGHAALVAVSMFALLQFQQVSSRN 338
                 E KR + +++VL SSF FAK+SL L+ +GG+LG+AAL  VSM A+L   QV+  +
Sbjct: 188  NLIRREGKRPNTVIKVLLSSFEFAKKSLKLDHVGGLLGNAALFTVSMIAMLHLHQVAHNH 247

Query: 337  SFVVESPQMEGDIFYGKSSKIS-QREVSSSNGFVKNLDVLAARG 209
                  P  + D++  ++ K +   E SSSNG + +LDV+ ARG
Sbjct: 248  -----HPYKQEDLYSDRNGKKAFGLEGSSSNGSLDHLDVMLARG 286


>gb|ABK94742.1| unknown [Populus trichocarpa]
          Length = 286

 Score =  300 bits (767), Expect = 6e-79
 Identities = 166/284 (58%), Positives = 209/284 (73%), Gaps = 13/284 (4%)
 Frame = -2

Query: 1021 EEIEAVLEKIWDIHDKLSDAIHSISRSHFLNTVKTLKKT-----------DDIFFTDKSN 875
            EEIEAVLEKIWD+HDKLSDAIHSISRSHFL+++K+LK             +D+ F D ++
Sbjct: 8    EEIEAVLEKIWDLHDKLSDAIHSISRSHFLHSIKSLKTNTTTTNKKLNNENDVGFEDNNS 67

Query: 874  KSRDRSSGYVFMKDVRMVADE-SAIAEAKSLNAIRTALENLEDQLEFFHTVQLQQRAERD 698
             S +R+SG+VF KD R+  ++ S I EAKSLN+IRTALENLEDQLEFFHTVQ+ QRAE D
Sbjct: 68   NSNNRASGFVFFKDFRVDGNDLSTIQEAKSLNSIRTALENLEDQLEFFHTVQIHQRAEID 127

Query: 697  AAIARLEQSRIVLAMRLADHHGKKYKVIEEALAFVGDVQNAGRFISPENLFESPRSQSGD 518
            AAIARLEQSRI+LAMRLA+HHGKKYKVIEEALAFVGDV +A  F+SPENL+ SP S  G+
Sbjct: 128  AAIARLEQSRIILAMRLAEHHGKKYKVIEEALAFVGDVHDASHFVSPENLYGSPTSPLGE 187

Query: 517  ISKSHERKRSSILMRVLSSSFTFAKRSLNLEQMGGVLGHAALVAVSMFALLQFQQVSSRN 338
                 E KR + ++ VL SSF FAK+SL L+ +GG+LG+AAL  VSM A+L   QV+  +
Sbjct: 188  NLIRREGKRPNTVINVLLSSFEFAKKSLKLDHVGGLLGNAALFTVSMIAMLHLHQVAHNH 247

Query: 337  SFVVESPQMEGDIFYGKSSKIS-QREVSSSNGFVKNLDVLAARG 209
                  P  + D++  ++ K +   E SSSNG + +LDV+ ARG
Sbjct: 248  -----HPYKQEDLYSDRNGKKAFGLEGSSSNGSLDHLDVMLARG 286


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