BLASTX nr result

ID: Coptis24_contig00010473 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010473
         (795 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76485.1| hypothetical protein VITISV_000801 [Vitis vinifera]   371   e-101
ref|XP_002270560.1| PREDICTED: uncharacterized protein LOC100264...   370   e-100
ref|XP_004161558.1| PREDICTED: uncharacterized protein LOC101224...   349   3e-94
ref|XP_004147754.1| PREDICTED: uncharacterized protein LOC101216...   349   3e-94
ref|XP_002332207.1| predicted protein [Populus trichocarpa] gi|2...   342   4e-92

>emb|CAN76485.1| hypothetical protein VITISV_000801 [Vitis vinifera]
          Length = 369

 Score =  371 bits (953), Expect = e-101
 Identities = 180/255 (70%), Positives = 213/255 (83%)
 Frame = -2

Query: 767 MKSVVCKVAIVGSGISGAVCASALARNGVSVTIFESGRGPGGRMSQRREITEDGKELYFD 588
           M S V +VA+VGSGISGAVCAS LARNGVSVT+FES RGPGGRMS R+EITEDGKEL FD
Sbjct: 1   MASPVSRVAVVGSGISGAVCASLLARNGVSVTLFESARGPGGRMSYRKEITEDGKELVFD 60

Query: 587 HGSPLFTVTNNKGVMALVCDWEARGLVTEWKDNFGIFDSVAAKFIDFEKEGSNKKYVGTP 408
           HG+PLFTV+N   V+ +V +WEARGLV EWK+NF  FD ++ KFIDFEKEG +KKYVG P
Sbjct: 61  HGAPLFTVSN-PDVLGIVREWEARGLVAEWKENFASFDCISRKFIDFEKEGLSKKYVGVP 119

Query: 407 GMNAVCRAMCNEPGVEAKFGITVGTLQWLEEKNSWLPIGLDGQTLGEYDAVVASDKNIVS 228
            MN++CRA+C+EPGVE+KFG+ VG+L+W +EKN W   GLDGQ LG ++ VVASDKNI S
Sbjct: 120 VMNSICRALCHEPGVESKFGVGVGSLEWFDEKNLWSLTGLDGQNLGNFEGVVASDKNIFS 179

Query: 227 PRSTAVTGRPPPLDMTLVPDLAPKLQEVPVLSCFSLMLAFSEPLLSIPVRGFSFQNNKIL 48
            R T VTGRPPPLD+ L+P+LA KLQEVPV SCF LMLAF++PL SI V+GFSF+N++IL
Sbjct: 180 KRFTDVTGRPPPLDLNLIPELAAKLQEVPVCSCFVLMLAFTKPLSSISVKGFSFKNSEIL 239

Query: 47  SRAFCDSSKPGRSAT 3
           S AFCDSSKPG  AT
Sbjct: 240 SWAFCDSSKPGHPAT 254


>ref|XP_002270560.1| PREDICTED: uncharacterized protein LOC100264528 [Vitis vinifera]
           gi|296082792|emb|CBI21797.3| unnamed protein product
           [Vitis vinifera]
          Length = 369

 Score =  370 bits (949), Expect = e-100
 Identities = 179/255 (70%), Positives = 213/255 (83%)
 Frame = -2

Query: 767 MKSVVCKVAIVGSGISGAVCASALARNGVSVTIFESGRGPGGRMSQRREITEDGKELYFD 588
           M S V +VA+VGSGISGAVCAS LARNGVSVT+FES RGPGGRMS R+EITEDGKEL FD
Sbjct: 1   MASPVSRVAVVGSGISGAVCASLLARNGVSVTLFESARGPGGRMSYRKEITEDGKELVFD 60

Query: 587 HGSPLFTVTNNKGVMALVCDWEARGLVTEWKDNFGIFDSVAAKFIDFEKEGSNKKYVGTP 408
           HG+PLFTV+N   V+ +V +WEARGLV EWK+NF  FD ++ KFIDFEKEG ++KYVG P
Sbjct: 61  HGAPLFTVSN-PDVLGIVREWEARGLVAEWKENFASFDCISRKFIDFEKEGLSEKYVGVP 119

Query: 407 GMNAVCRAMCNEPGVEAKFGITVGTLQWLEEKNSWLPIGLDGQTLGEYDAVVASDKNIVS 228
            MN++CRA+C+EPGVE+KFG+ VG+L+W +EKN W   GLDGQ LG ++ VVASDKNI S
Sbjct: 120 VMNSICRALCHEPGVESKFGVGVGSLEWFDEKNLWSLTGLDGQNLGNFEGVVASDKNIFS 179

Query: 227 PRSTAVTGRPPPLDMTLVPDLAPKLQEVPVLSCFSLMLAFSEPLLSIPVRGFSFQNNKIL 48
            R T VTGRPPPLD+ L+P+LA KLQEVPV SCF LMLAF++PL SI V+GFSF+N++IL
Sbjct: 180 KRFTDVTGRPPPLDLNLIPELAAKLQEVPVCSCFVLMLAFTKPLSSISVKGFSFKNSEIL 239

Query: 47  SRAFCDSSKPGRSAT 3
           S AFCDSSKPG  AT
Sbjct: 240 SWAFCDSSKPGHPAT 254


>ref|XP_004161558.1| PREDICTED: uncharacterized protein LOC101224633 [Cucumis sativus]
          Length = 369

 Score =  349 bits (896), Expect = 3e-94
 Identities = 162/253 (64%), Positives = 213/253 (84%)
 Frame = -2

Query: 767 MKSVVCKVAIVGSGISGAVCASALARNGVSVTIFESGRGPGGRMSQRREITEDGKELYFD 588
           M SV+ KVA+VGSGISGA CA +LARNGVSVT+FES RGPGGRMSQRREI EDG+EL+FD
Sbjct: 1   MSSVLSKVAVVGSGISGAACAWSLARNGVSVTLFESARGPGGRMSQRREIAEDGRELHFD 60

Query: 587 HGSPLFTVTNNKGVMALVCDWEARGLVTEWKDNFGIFDSVAAKFIDFEKEGSNKKYVGTP 408
           HG+P FTV N+  V++LV +WE++ +  EWK+ F IFD  + +F   E+E  + +YVGTP
Sbjct: 61  HGAPYFTV-NSPEVLSLVREWESKKICAEWKEGFDIFDCFSNQFTSTEQERVSGRYVGTP 119

Query: 407 GMNAVCRAMCNEPGVEAKFGITVGTLQWLEEKNSWLPIGLDGQTLGEYDAVVASDKNIVS 228
           GMN++C+A+C+EPGVE+KFG++VG ++WLE+ NSWL +G+DGQ+LG+++ +VASDKNIVS
Sbjct: 120 GMNSICKALCHEPGVESKFGVSVGRMEWLEKDNSWLLLGIDGQSLGQFEGIVASDKNIVS 179

Query: 227 PRSTAVTGRPPPLDMTLVPDLAPKLQEVPVLSCFSLMLAFSEPLLSIPVRGFSFQNNKIL 48
           PR T+VTGR PPLD++LVPDLA KLQ +PV+ CF+LMLAF +PL  IPV+GF  +N+++L
Sbjct: 180 PRFTSVTGRVPPLDLSLVPDLAIKLQNIPVIPCFALMLAFEQPLSMIPVKGFFIKNSEVL 239

Query: 47  SRAFCDSSKPGRS 9
           S A+CDSSKPGRS
Sbjct: 240 SWAYCDSSKPGRS 252


>ref|XP_004147754.1| PREDICTED: uncharacterized protein LOC101216187 [Cucumis sativus]
          Length = 369

 Score =  349 bits (896), Expect = 3e-94
 Identities = 162/253 (64%), Positives = 213/253 (84%)
 Frame = -2

Query: 767 MKSVVCKVAIVGSGISGAVCASALARNGVSVTIFESGRGPGGRMSQRREITEDGKELYFD 588
           M SV+ KVA+VGSGISGA CA +LARNGVSVT+FES RGPGGRMSQRREI EDG+EL+FD
Sbjct: 1   MSSVLSKVAVVGSGISGAACAWSLARNGVSVTLFESARGPGGRMSQRREIAEDGRELHFD 60

Query: 587 HGSPLFTVTNNKGVMALVCDWEARGLVTEWKDNFGIFDSVAAKFIDFEKEGSNKKYVGTP 408
           HG+P FTV N+  V++LV +WE++ +  EWK+ F IFD  + +F   E+E  + +YVGTP
Sbjct: 61  HGAPYFTV-NSPEVLSLVREWESKKICAEWKEGFDIFDCFSNQFTSTEQERVSGRYVGTP 119

Query: 407 GMNAVCRAMCNEPGVEAKFGITVGTLQWLEEKNSWLPIGLDGQTLGEYDAVVASDKNIVS 228
           GMN++C+A+C+EPGVE+KFG++VG ++WLE+ NSWL +G+DGQ+LG+++ +VASDKNIVS
Sbjct: 120 GMNSICKALCHEPGVESKFGVSVGRMEWLEKDNSWLLLGIDGQSLGQFEGIVASDKNIVS 179

Query: 227 PRSTAVTGRPPPLDMTLVPDLAPKLQEVPVLSCFSLMLAFSEPLLSIPVRGFSFQNNKIL 48
           PR T+VTGR PPLD++LVPDLA KLQ +PV+ CF+LMLAF +PL  IPV+GF  +N+++L
Sbjct: 180 PRFTSVTGRVPPLDLSLVPDLAIKLQNIPVIPCFALMLAFEQPLSMIPVKGFFIKNSEVL 239

Query: 47  SRAFCDSSKPGRS 9
           S A+CDSSKPGRS
Sbjct: 240 SWAYCDSSKPGRS 252


>ref|XP_002332207.1| predicted protein [Populus trichocarpa] gi|222875314|gb|EEF12445.1|
           predicted protein [Populus trichocarpa]
          Length = 372

 Score =  342 bits (878), Expect = 4e-92
 Identities = 163/253 (64%), Positives = 206/253 (81%)
 Frame = -2

Query: 767 MKSVVCKVAIVGSGISGAVCASALARNGVSVTIFESGRGPGGRMSQRREITEDGKELYFD 588
           M +V  KVA+VG GISGAVCAS LA+NG+SVT+FES RGPGGRMSQRREI+EDGKEL FD
Sbjct: 1   MSNVATKVAVVGGGISGAVCASTLAKNGISVTLFESARGPGGRMSQRREISEDGKELLFD 60

Query: 587 HGSPLFTVTNNKGVMALVCDWEARGLVTEWKDNFGIFDSVAAKFIDFEKEGSNKKYVGTP 408
           HG+P F+ +N+  V+ LV +WE++GLV EWK+N G FD ++ KF+D E+E  NKKYVG P
Sbjct: 61  HGAPFFSASNSD-VLRLVHEWESKGLVEEWKENCGSFDCISKKFLDIEQEAPNKKYVGIP 119

Query: 407 GMNAVCRAMCNEPGVEAKFGITVGTLQWLEEKNSWLPIGLDGQTLGEYDAVVASDKNIVS 228
           GMN++C+A+CNE GVE+KFG+++G L+ L+++  W   GLDGQ LG +  VV SDK I S
Sbjct: 120 GMNSICKALCNETGVESKFGVSIGRLECLDDEK-WSLTGLDGQNLGRFSGVVVSDKGIAS 178

Query: 227 PRSTAVTGRPPPLDMTLVPDLAPKLQEVPVLSCFSLMLAFSEPLLSIPVRGFSFQNNKIL 48
           PR T VTGRPPPLD++L P+LA KLQ++PV  CF+LMLAFSEPL SI V+GFSF+N++IL
Sbjct: 179 PRFTDVTGRPPPLDLSLTPELALKLQDIPVSPCFALMLAFSEPLSSISVKGFSFKNSEIL 238

Query: 47  SRAFCDSSKPGRS 9
           S + CDSSKPGRS
Sbjct: 239 SWSHCDSSKPGRS 251


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