BLASTX nr result

ID: Coptis24_contig00010461 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010461
         (907 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270682.1| PREDICTED: electron transfer flavoprotein-ub...   415   e-114
emb|CBI36719.3| unnamed protein product [Vitis vinifera]              415   e-114
gb|EEC67310.1| hypothetical protein OsI_34318 [Oryza sativa Indi...   410   e-112
gb|ABB47885.1| Electron transfer flavoprotein-ubiquinone oxidore...   408   e-111
gb|ABB47884.1| Electron transfer flavoprotein-ubiquinone oxidore...   408   e-111

>ref|XP_002270682.1| PREDICTED: electron transfer flavoprotein-ubiquinone oxidoreductase,
            mitochondrial-like [Vitis vinifera]
          Length = 676

 Score =  415 bits (1066), Expect = e-114
 Identities = 188/229 (82%), Positives = 209/229 (91%)
 Frame = -3

Query: 905  VFPGGAIIGCSAGFLNVPKIKGTHTAMKSGMLAAEATYGALRENSSMETYWDNLKKSWIW 726
            VFPGGAIIGCSAGFLNVPKIKGTHTAMKSGMLAAEA +  L E SSME YWD L+ SWIW
Sbjct: 448  VFPGGAIIGCSAGFLNVPKIKGTHTAMKSGMLAAEAAFDVLHEGSSMEKYWDGLRNSWIW 507

Query: 725  DELYKARNFRPAFDYGLIPGLALSAIEHYVLRSRSPLTLKHGKPDHEATEPASLHSPIQY 546
            +EL+KARN+RPAF+YGLIPGLALSA+EHYVL+ RSPLTLKHGKPDHEAT+ A LHSPIQY
Sbjct: 508  EELHKARNYRPAFEYGLIPGLALSALEHYVLKGRSPLTLKHGKPDHEATDVAQLHSPIQY 567

Query: 545  LKPDGMISYDVPTSLYRSNTNHAHDQPAHLRLRDPAIPELINLPHYAGPESRYCPARVYE 366
             KPDG++S+DVPTSLYRSNTNH HDQP+HL LRDP IP+ +NLP +AGPESRYCPARVYE
Sbjct: 568  PKPDGIVSFDVPTSLYRSNTNHDHDQPSHLHLRDPQIPDRVNLPDFAGPESRYCPARVYE 627

Query: 365  YIKDDEGQPKLQINAQNCLHCKACDIKDPKQNIEWTVPEGGGGPGYLVM 219
            Y+ D++G+ +LQINAQNCLHCKACDIKDPKQNIEWTVPEGGGGPGY VM
Sbjct: 628  YVPDEKGELRLQINAQNCLHCKACDIKDPKQNIEWTVPEGGGGPGYSVM 676


>emb|CBI36719.3| unnamed protein product [Vitis vinifera]
          Length = 536

 Score =  415 bits (1066), Expect = e-114
 Identities = 188/229 (82%), Positives = 209/229 (91%)
 Frame = -3

Query: 905 VFPGGAIIGCSAGFLNVPKIKGTHTAMKSGMLAAEATYGALRENSSMETYWDNLKKSWIW 726
           VFPGGAIIGCSAGFLNVPKIKGTHTAMKSGMLAAEA +  L E SSME YWD L+ SWIW
Sbjct: 308 VFPGGAIIGCSAGFLNVPKIKGTHTAMKSGMLAAEAAFDVLHEGSSMEKYWDGLRNSWIW 367

Query: 725 DELYKARNFRPAFDYGLIPGLALSAIEHYVLRSRSPLTLKHGKPDHEATEPASLHSPIQY 546
           +EL+KARN+RPAF+YGLIPGLALSA+EHYVL+ RSPLTLKHGKPDHEAT+ A LHSPIQY
Sbjct: 368 EELHKARNYRPAFEYGLIPGLALSALEHYVLKGRSPLTLKHGKPDHEATDVAQLHSPIQY 427

Query: 545 LKPDGMISYDVPTSLYRSNTNHAHDQPAHLRLRDPAIPELINLPHYAGPESRYCPARVYE 366
            KPDG++S+DVPTSLYRSNTNH HDQP+HL LRDP IP+ +NLP +AGPESRYCPARVYE
Sbjct: 428 PKPDGIVSFDVPTSLYRSNTNHDHDQPSHLHLRDPQIPDRVNLPDFAGPESRYCPARVYE 487

Query: 365 YIKDDEGQPKLQINAQNCLHCKACDIKDPKQNIEWTVPEGGGGPGYLVM 219
           Y+ D++G+ +LQINAQNCLHCKACDIKDPKQNIEWTVPEGGGGPGY VM
Sbjct: 488 YVPDEKGELRLQINAQNCLHCKACDIKDPKQNIEWTVPEGGGGPGYSVM 536


>gb|EEC67310.1| hypothetical protein OsI_34318 [Oryza sativa Indica Group]
          Length = 582

 Score =  410 bits (1053), Expect = e-112
 Identities = 187/229 (81%), Positives = 205/229 (89%)
 Frame = -3

Query: 905  VFPGGAIIGCSAGFLNVPKIKGTHTAMKSGMLAAEATYGALRENSSMETYWDNLKKSWIW 726
            VFPGGAIIGCSAGFLNVPKIKGTHTAMKSGMLAAEAT+  L E SSME YW+NLKKSWIW
Sbjct: 354  VFPGGAIIGCSAGFLNVPKIKGTHTAMKSGMLAAEATFKTLVEGSSMELYWENLKKSWIW 413

Query: 725  DELYKARNFRPAFDYGLIPGLALSAIEHYVLRSRSPLTLKHGKPDHEATEPASLHSPIQY 546
            +ELY+ARN+RPAF+YG IPG+ALSA+E YV + +SP TLKHG PDHEAT+ ASLHSPIQY
Sbjct: 414  EELYRARNYRPAFEYGFIPGIALSALERYVFKGKSPFTLKHGIPDHEATDMASLHSPIQY 473

Query: 545  LKPDGMISYDVPTSLYRSNTNHAHDQPAHLRLRDPAIPELINLPHYAGPESRYCPARVYE 366
             KPDG IS+DVPTSLYRS+TNH HDQP HLRLRDP +PE +NLP YAGPESRYCPARVYE
Sbjct: 474  PKPDGQISFDVPTSLYRSSTNHEHDQPPHLRLRDPTVPERVNLPLYAGPESRYCPARVYE 533

Query: 365  YIKDDEGQPKLQINAQNCLHCKACDIKDPKQNIEWTVPEGGGGPGYLVM 219
            Y+ D++G  KL INAQNCLHCKACDIKDPKQNIEWTVPEGGGGPGY VM
Sbjct: 534  YVTDEKGDQKLHINAQNCLHCKACDIKDPKQNIEWTVPEGGGGPGYTVM 582


>gb|ABB47885.1| Electron transfer flavoprotein-ubiquinone
            oxidoreductase,mitochondrial precursor, putative,
            expressed [Oryza sativa Japonica Group]
          Length = 572

 Score =  408 bits (1048), Expect = e-111
 Identities = 186/229 (81%), Positives = 204/229 (89%)
 Frame = -3

Query: 905  VFPGGAIIGCSAGFLNVPKIKGTHTAMKSGMLAAEATYGALRENSSMETYWDNLKKSWIW 726
            VFPGGAIIGCSAGFLNVPKIKGTHTAMKSGMLAAEAT+  L E SSME YW+NLKKSWIW
Sbjct: 344  VFPGGAIIGCSAGFLNVPKIKGTHTAMKSGMLAAEATFKTLVEGSSMELYWENLKKSWIW 403

Query: 725  DELYKARNFRPAFDYGLIPGLALSAIEHYVLRSRSPLTLKHGKPDHEATEPASLHSPIQY 546
            +ELY+ARN+RPAF+YG IPG+ALSA+E YV + +SP TLKHG PDHEAT+ ASLHSPIQY
Sbjct: 404  EELYRARNYRPAFEYGFIPGIALSALERYVFKGKSPFTLKHGIPDHEATDMASLHSPIQY 463

Query: 545  LKPDGMISYDVPTSLYRSNTNHAHDQPAHLRLRDPAIPELINLPHYAGPESRYCPARVYE 366
             KPDG IS+DVPTSLYRS+TNH HDQP HLRLRDP +PE +NLP YAGPES YCPARVYE
Sbjct: 464  PKPDGQISFDVPTSLYRSSTNHEHDQPPHLRLRDPTVPERVNLPLYAGPESHYCPARVYE 523

Query: 365  YIKDDEGQPKLQINAQNCLHCKACDIKDPKQNIEWTVPEGGGGPGYLVM 219
            Y+ D++G  KL INAQNCLHCKACDIKDPKQNIEWTVPEGGGGPGY VM
Sbjct: 524  YVTDEKGDQKLHINAQNCLHCKACDIKDPKQNIEWTVPEGGGGPGYTVM 572


>gb|ABB47884.1| Electron transfer flavoprotein-ubiquinone
            oxidoreductase,mitochondrial precursor, putative,
            expressed [Oryza sativa Japonica Group]
          Length = 575

 Score =  408 bits (1048), Expect = e-111
 Identities = 186/229 (81%), Positives = 204/229 (89%)
 Frame = -3

Query: 905  VFPGGAIIGCSAGFLNVPKIKGTHTAMKSGMLAAEATYGALRENSSMETYWDNLKKSWIW 726
            VFPGGAIIGCSAGFLNVPKIKGTHTAMKSGMLAAEAT+  L E SSME YW+NLKKSWIW
Sbjct: 347  VFPGGAIIGCSAGFLNVPKIKGTHTAMKSGMLAAEATFKTLVEGSSMELYWENLKKSWIW 406

Query: 725  DELYKARNFRPAFDYGLIPGLALSAIEHYVLRSRSPLTLKHGKPDHEATEPASLHSPIQY 546
            +ELY+ARN+RPAF+YG IPG+ALSA+E YV + +SP TLKHG PDHEAT+ ASLHSPIQY
Sbjct: 407  EELYRARNYRPAFEYGFIPGIALSALERYVFKGKSPFTLKHGIPDHEATDMASLHSPIQY 466

Query: 545  LKPDGMISYDVPTSLYRSNTNHAHDQPAHLRLRDPAIPELINLPHYAGPESRYCPARVYE 366
             KPDG IS+DVPTSLYRS+TNH HDQP HLRLRDP +PE +NLP YAGPES YCPARVYE
Sbjct: 467  PKPDGQISFDVPTSLYRSSTNHEHDQPPHLRLRDPTVPERVNLPLYAGPESHYCPARVYE 526

Query: 365  YIKDDEGQPKLQINAQNCLHCKACDIKDPKQNIEWTVPEGGGGPGYLVM 219
            Y+ D++G  KL INAQNCLHCKACDIKDPKQNIEWTVPEGGGGPGY VM
Sbjct: 527  YVTDEKGDQKLHINAQNCLHCKACDIKDPKQNIEWTVPEGGGGPGYTVM 575


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