BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010448
         (1127 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ40869.1| transcriptional factor MYB-4 [Coptis japonica]        357   4e-96
ref|XP_002283785.1| PREDICTED: uncharacterized protein LOC100241...   340   4e-91
ref|XP_004141664.1| PREDICTED: uncharacterized protein LOC101214...   336   7e-90
ref|XP_002515966.1| DNA binding protein, putative [Ricinus commu...   335   2e-89
gb|ABK96220.1| unknown [Populus trichocarpa x Populus deltoides]      331   2e-88

>dbj|BAJ40869.1| transcriptional factor MYB-4 [Coptis japonica]
          Length = 221

 Score =  357 bits (915), Expect = 4e-96
 Identities = 180/204 (88%), Positives = 180/204 (88%), Gaps = 9/204 (4%)
 Frame = +2

Query: 2   HNSRTCPTIKGVKLFGVRLTDGAGLMKKSASMGNLSLYCGASSS----PSQNSPF----- 154
           HNSRTCPTIKGVKLFGVRLTDGAGLMKKSASMGNLSLYCGASSS    PS NSP      
Sbjct: 13  HNSRTCPTIKGVKLFGVRLTDGAGLMKKSASMGNLSLYCGASSSGAASPSHNSPCSDTLR 72

Query: 155 DLGHSSINDGYVSDDPAHTSCSSSNCRGDRKKGTPWTEEEHRXXXXXXXXXXXXDWRGIA 334
           DLGHSSINDGYVSDDPAHTSCSSSNCRGDRKKGTPWTEEEHR            DWRGIA
Sbjct: 73  DLGHSSINDGYVSDDPAHTSCSSSNCRGDRKKGTPWTEEEHRLFLLGLQKLGKGDWRGIA 132

Query: 335 RNFVISRTPTQVASHAQKYFIRQTNSTRRKRRSSLFDMVPDMSIDPQPVPEEPLANGVSQ 514
           RNFVISRTPTQVASHAQKYFIRQTNSTRRKRRSSLFDMVPDMSIDPQPVPEEPLANGVSQ
Sbjct: 133 RNFVISRTPTQVASHAQKYFIRQTNSTRRKRRSSLFDMVPDMSIDPQPVPEEPLANGVSQ 192

Query: 515 VVESVDTNPLPTLCLSLDGECEPM 586
           VVES DTNPLPTLCLSLDGECEPM
Sbjct: 193 VVESEDTNPLPTLCLSLDGECEPM 216


>ref|XP_002283785.1| PREDICTED: uncharacterized protein LOC100241227 [Vitis vinifera]
            gi|297743200|emb|CBI36067.3| unnamed protein product
            [Vitis vinifera]
          Length = 358

 Score =  340 bits (872), Expect = 4e-91
 Identities = 193/348 (55%), Positives = 234/348 (67%), Gaps = 21/348 (6%)
 Frame = +2

Query: 2    HNSRTCPT---------IKGVKLFGVRLTDGAGLMKKSASMGNLSLY-----CGASSSPS 139
            HNSRTCP+         I GVKLFGVRLTDG+ ++KKSASMG+LS         A++SP+
Sbjct: 13   HNSRTCPSRGGGAVAGGIGGVKLFGVRLTDGS-IIKKSASMGSLSSAHYHSSSSAAASPN 71

Query: 140  QNSPF-DLGHSSIN--DGYVSDDPAHTSCSSSNCRGDRKKGTPWTEEEHRXXXXXXXXXX 310
             +SP  D    +I+  DGY+SDDP   +CSS N RG+RKKG PWTEEEHR          
Sbjct: 72   PSSPSSDPLRDAIHEPDGYLSDDPGQATCSS-NRRGERKKGVPWTEEEHRLFLFGLQRLG 130

Query: 311  XXDWRGIARNFVISRTPTQVASHAQKYFIRQTNSTRRKRRSSLFDMVPDMSIDPQPVPEE 490
              DWRGI+RN+VISRTPTQVASHAQKYFIRQ+N+TRRKRRSSLFDMVPDM  D  PVPEE
Sbjct: 131  KGDWRGISRNYVISRTPTQVASHAQKYFIRQSNATRRKRRSSLFDMVPDMVTDTPPVPEE 190

Query: 491  PLANGVSQVVESVDTNPLPTLCLSLDGECEPMESTSHNIPTETEE----FMPCSDSTPII 658
                  SQ  E+ + + +P+L LSL+ E EPME+ S     E EE     +P S+  P++
Sbjct: 191  QFLVPTSQTGETDNASSVPSLNLSLNMEFEPMETISQETVKEAEEAEETVIPRSELPPVV 250

Query: 659  PAFLPTYLPLSFPFWPPNIVPAVEEKGMEISHHQVLKPTPILSRDPVNVDELVGMSKLTL 838
            PAF P YLP+ FPFWPPN   A EEK  E S HQVLKP P+L ++PVNVDELVGMS+L+L
Sbjct: 251  PAFFPGYLPVPFPFWPPNAASAEEEKESE-SSHQVLKPIPVLPKEPVNVDELVGMSQLSL 309

Query: 839  GAAATDCIEPSPLSLNLIGSSARQSAFHANQPVNRSNLSKRDGNAIPA 982
            G      I+ SPLSL L+G+ +RQSAFH N  V  S L K   + + A
Sbjct: 310  GEINNGHIDSSPLSLKLLGAPSRQSAFHTNTSVGGSELGKGKNSVVQA 357


>ref|XP_004141664.1| PREDICTED: uncharacterized protein LOC101214316 [Cucumis sativus]
            gi|449480623|ref|XP_004155948.1| PREDICTED:
            uncharacterized protein LOC101229963 [Cucumis sativus]
          Length = 346

 Score =  336 bits (861), Expect = 7e-90
 Identities = 188/339 (55%), Positives = 231/339 (68%), Gaps = 14/339 (4%)
 Frame = +2

Query: 2    HNSRTCPTIKG--------VKLFGVRLTDGAGLMKKSASMGNLSLYCGASSS----PSQN 145
            HNSRTCP+  G        VKLFGVRLTDG+  +KKSASMGNLS++  +SSS    P+ +
Sbjct: 13   HNSRTCPSRAGGGGGSGAGVKLFGVRLTDGS-FIKKSASMGNLSVHYHSSSSAAASPNPD 71

Query: 146  SP-FDLGHSSINDGYVSDDPAHTSCSSSNCRGDRKKGTPWTEEEHRXXXXXXXXXXXXDW 322
            SP  D  H S  DG++SDDPAH SCS+ N R +RKKG PWTEEEHR            DW
Sbjct: 72   SPNSDPVHDS--DGFLSDDPAHASCSA-NRRAERKKGVPWTEEEHRLFLVGLQKLGKGDW 128

Query: 323  RGIARNFVISRTPTQVASHAQKYFIRQTNSTRRKRRSSLFDMVPDMSIDPQPVPEEPLAN 502
            RGI+RNFVI+RTPTQVASHAQKYFIRQ+N+TRRKRRSSLFDMVP+M+ DP PVPE+ + +
Sbjct: 129  RGISRNFVITRTPTQVASHAQKYFIRQSNATRRKRRSSLFDMVPEMATDPLPVPEDEILH 188

Query: 503  GVSQVVESVDTNPLPTLCLSLDGECEPMESTSHNIPTETE-EFMPCSDSTPIIPAFLPTY 679
              SQ  E+ ++N  P+L LSL+ E   ME+T      E     M  +   P+IP F+P Y
Sbjct: 189  -ASQTKETENSNSQPSLNLSLNSEFHMMETTVEENGKELHVPKMEVAGFPPVIPGFIPAY 247

Query: 680  LPLSFPFWPPNIVPAVEEKGMEISHHQVLKPTPILSRDPVNVDELVGMSKLTLGAAATDC 859
            +P+ FP W P+  P  EE  +E  HH+VLKP P++  +PVNVDELVGMS+LTL     + 
Sbjct: 248  MPVPFPIWAPSSFPMEEENVVETCHHEVLKPIPVVPTEPVNVDELVGMSQLTLREYERER 307

Query: 860  IEPSPLSLNLIGSSARQSAFHANQPVNRSNLSKRDGNAI 976
             EPSPLSL LIG  +RQSAFH N PV+RS L K D + I
Sbjct: 308  REPSPLSLKLIGERSRQSAFHPNAPVSRSELIKDDTDTI 346


>ref|XP_002515966.1| DNA binding protein, putative [Ricinus communis]
            gi|223544871|gb|EEF46386.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 381

 Score =  335 bits (858), Expect = 2e-89
 Identities = 195/372 (52%), Positives = 236/372 (63%), Gaps = 45/372 (12%)
 Frame = +2

Query: 2    HNSRTCPT--------------------IKGVKLFGVRLTDGAGLMKKSASMGNLSLY-- 115
            HNSRTCPT                    I GV+LFGVRLTDG+ ++KKSASMGNLS +  
Sbjct: 13   HNSRTCPTRSSTCSSAAGSGSASSSASSIAGVRLFGVRLTDGS-IIKKSASMGNLSAHYH 71

Query: 116  CGASSSPSQNSPF-DLGHSSINDGYVSDDPAHTSCSSSNCRGDRKKGTPWTEEEHRXXXX 292
              A++SP+ +SP  D    S+ DGY+SDDPAH SCS+ N RG+RKKG PWTEEEHR    
Sbjct: 72   SSAAASPNPDSPLSDHVRDSVQDGYLSDDPAHASCST-NRRGERKKGVPWTEEEHRLFLI 130

Query: 293  XXXXXXXXDWRGIARNFVISRTPTQVASHAQKYFIRQTNSTRRKRRSSLFDMVPDMSIDP 472
                    DWRGIARN+V+SRTPTQVASHAQKYFIRQTN+TRRKRRSSLFDMVPDM+ +P
Sbjct: 131  GLQKLGKGDWRGIARNYVVSRTPTQVASHAQKYFIRQTNATRRKRRSSLFDMVPDMATEP 190

Query: 473  QPVPEE-PLANGVSQVVESVDTNPLPTLCLSLDGECEPMESTSHNIPTETE--------- 622
            Q VPEE  L +G  Q+ ++ + + LP+L LS   ECEPME+ S     E E         
Sbjct: 191  QSVPEEHELPSG--QLGDTDNADALPSLNLSFKPECEPMETASEEPAEEPEEMLTGSSEL 248

Query: 623  --------EFMPC----SDSTPIIPAFLPTYLPLSFPFWPPNIVPAVEEKGMEISHHQVL 766
                    EF P     S+ TP I  F P Y+P+ +PFW  N     E   +E S+HQVL
Sbjct: 249  KQTEHRLSEFAPAVPQLSEFTPFISGFYPAYMPIPYPFWSTNTAIPEEANTVETSNHQVL 308

Query: 767  KPTPILSRDPVNVDELVGMSKLTLGAAATDCIEPSPLSLNLIGSSARQSAFHANQPVNRS 946
            KP PI  ++PVNVDELVGMS L++G    D  E S LSL LIG  +RQSAFHAN  V+ S
Sbjct: 309  KPVPIFPKEPVNVDELVGMSHLSIGEMERDHRELSRLSLKLIGEPSRQSAFHANASVSGS 368

Query: 947  NLSKRDGNAIPA 982
            +LS+  G+ I A
Sbjct: 369  DLSQGKGSPIQA 380


>gb|ABK96220.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 369

 Score =  331 bits (848), Expect = 2e-88
 Identities = 192/355 (54%), Positives = 232/355 (65%), Gaps = 37/355 (10%)
 Frame = +2

Query: 2    HNSRTCPT-----------IKGVKLFGVRLTDGAGLMKKSASMGNLSLYCGASSS----P 136
            HNSRTCPT           + GVKLFGVRLTDG+ ++KKSASMGNLS +  +SSS    P
Sbjct: 13   HNSRTCPTRSSLASSSSSPLSGVKLFGVRLTDGS-IIKKSASMGNLSAHYHSSSSAAASP 71

Query: 137  SQNSPF-DLGHSSINDGYVSDDPA-HTSCSSSNCRGDRKKGTPWTEEEHRXXXXXXXXXX 310
            + +SP  D  H   +DGY+SDDPA H SCS+S  RGDRKKG PWTEEEHR          
Sbjct: 72   NPDSPVSDRVH---DDGYLSDDPAAHASCSTSR-RGDRKKGVPWTEEEHRLFLIGLQKLG 127

Query: 311  XXDWRGIARNFVISRTPTQVASHAQKYFIRQTNSTRRKRRSSLFDMVPDMSIDPQPVPEE 490
              DWRGIARNFV+SRTPTQVASHAQK+FIRQ+N+TRRKRRSSLFDMVP+M+ DPQPVPEE
Sbjct: 128  KGDWRGIARNFVVSRTPTQVASHAQKFFIRQSNATRRKRRSSLFDMVPEMATDPQPVPEE 187

Query: 491  PLANGVSQVVESVDTNPLPTLCLSLDGECEPMESTSHNIPTETE-------EFMP----C 637
                  SQ  +  + + LP+L LSL  E EPM++ S  +  E +       EF P     
Sbjct: 188  QELPS-SQAGDDDNVDALPSLNLSLKPEFEPMDTESQELVKERDKTVMGFSEFKPSVPSS 246

Query: 638  SDSTPI---------IPAFLPTYLPLSFPFWPPNIVPAVEEKGMEISHHQVLKPTPILSR 790
            S+  PI         +P F P Y+P+ +P+W PN  P  E KG   SHH+VLKP P + +
Sbjct: 247  SEFVPIVSGSNEFTAVPGFFPAYMPVPYPYWAPNTTPFEEGKGAATSHHEVLKPVPSILK 306

Query: 791  DPVNVDELVGMSKLTLGAAATDCIEPSPLSLNLIGSSARQSAFHANQPVNRSNLS 955
            +P NVDELVGMS L+LG       EPSPLSL LIG + RQSAFHA+ P + S+LS
Sbjct: 307  EPFNVDELVGMSHLSLGEIERRHREPSPLSLKLIGEAPRQSAFHASAPASGSDLS 361