BLASTX nr result

ID: Coptis24_contig00010445 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010445
         (552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285011.1| PREDICTED: DNA-binding protein S1FA2 isoform...    83   3e-14
emb|CAN63582.1| hypothetical protein VITISV_033336 [Vitis vinifera]    83   3e-14
ref|XP_004137812.1| PREDICTED: DNA-binding protein S1FA2-like [C...    81   1e-13
ref|XP_002525167.1| DNA-binding protein S1FA, putative [Ricinus ...    81   1e-13
ref|XP_004143239.1| PREDICTED: DNA-binding protein S1FA1-like [C...    80   2e-13

>ref|XP_002285011.1| PREDICTED: DNA-binding protein S1FA2 isoform 1 [Vitis vinifera]
           gi|225435257|ref|XP_002285012.1| PREDICTED: DNA-binding
           protein S1FA2 isoform 2 [Vitis vinifera]
           gi|297746228|emb|CBI16284.3| unnamed protein product
           [Vitis vinifera]
          Length = 89

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 43/71 (60%), Positives = 48/71 (67%)
 Frame = +1

Query: 1   GNVMKDVEAKGFNPGLIVLLVVASLMLVFLVGNYALYMYAQXXXXXXXXXXXXXXXXXXX 180
           GNV+KD +AKGFNPGLIVLL+V  L+LVFLVGNYALY+YAQ                   
Sbjct: 19  GNVIKDADAKGFNPGLIVLLLVVGLLLVFLVGNYALYVYAQKTLPPRKKKPVSKKKMKKE 78

Query: 181 XLKQGVSAPGE 213
            LKQGVSAPGE
Sbjct: 79  RLKQGVSAPGE 89


>emb|CAN63582.1| hypothetical protein VITISV_033336 [Vitis vinifera]
          Length = 108

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 43/71 (60%), Positives = 48/71 (67%)
 Frame = +1

Query: 1   GNVMKDVEAKGFNPGLIVLLVVASLMLVFLVGNYALYMYAQXXXXXXXXXXXXXXXXXXX 180
           GNV+KD +AKGFNPGLIVLL+V  L+LVFLVGNYALY+YAQ                   
Sbjct: 38  GNVIKDADAKGFNPGLIVLLLVVGLLLVFLVGNYALYVYAQKTLPPRKKKPVSKKKMKKE 97

Query: 181 XLKQGVSAPGE 213
            LKQGVSAPGE
Sbjct: 98  RLKQGVSAPGE 108


>ref|XP_004137812.1| PREDICTED: DNA-binding protein S1FA2-like [Cucumis sativus]
           gi|449516221|ref|XP_004165146.1| PREDICTED: DNA-binding
           protein S1FA2-like [Cucumis sativus]
          Length = 78

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 41/71 (57%), Positives = 47/71 (66%)
 Frame = +1

Query: 1   GNVMKDVEAKGFNPGLIVLLVVASLMLVFLVGNYALYMYAQXXXXXXXXXXXXXXXXXXX 180
           GNV+ D+EAKGFNP LIVLL+V  L+L+FLVGNYALY+YAQ                   
Sbjct: 8   GNVINDIEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRE 67

Query: 181 XLKQGVSAPGE 213
            LKQGVSAPGE
Sbjct: 68  RLKQGVSAPGE 78


>ref|XP_002525167.1| DNA-binding protein S1FA, putative [Ricinus communis]
           gi|223535464|gb|EEF37133.1| DNA-binding protein S1FA,
           putative [Ricinus communis]
          Length = 89

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 40/71 (56%), Positives = 46/71 (64%)
 Frame = +1

Query: 1   GNVMKDVEAKGFNPGLIVLLVVASLMLVFLVGNYALYMYAQXXXXXXXXXXXXXXXXXXX 180
           GNV+KDVE KGFNPGLIVLLV+  ++L FL+GNY LYMYAQ                   
Sbjct: 19  GNVVKDVETKGFNPGLIVLLVIGGIVLTFLIGNYVLYMYAQKTLPPKKKKPVSKKKMKRE 78

Query: 181 XLKQGVSAPGE 213
            L+QGVSAPGE
Sbjct: 79  RLRQGVSAPGE 89


>ref|XP_004143239.1| PREDICTED: DNA-binding protein S1FA1-like [Cucumis sativus]
           gi|449482509|ref|XP_004156305.1| PREDICTED: DNA-binding
           protein S1FA1-like [Cucumis sativus]
          Length = 89

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 42/71 (59%), Positives = 46/71 (64%)
 Frame = +1

Query: 1   GNVMKDVEAKGFNPGLIVLLVVASLMLVFLVGNYALYMYAQXXXXXXXXXXXXXXXXXXX 180
           GNV++D EA+GFNPGLIVLLVV  L+  FLVGNYALYMYAQ                   
Sbjct: 19  GNVIRDGEARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRE 78

Query: 181 XLKQGVSAPGE 213
            LKQGVSAPGE
Sbjct: 79  RLKQGVSAPGE 89


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