BLASTX nr result
ID: Coptis24_contig00010434
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00010434
(954 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003525839.1| PREDICTED: probable hexaprenyl pyrophosphate... 225 4e-77
ref|XP_003550028.1| PREDICTED: probable hexaprenyl pyrophosphate... 222 3e-76
emb|CAC20852.1| geranyl diphosphat synthase [Quercus robur] 218 1e-74
ref|XP_002268229.2| PREDICTED: decaprenyl-diphosphate synthase s... 221 2e-74
gb|AAR08151.1| geranyl diphosphate synthase [Vitis vinifera] 218 1e-73
>ref|XP_003525839.1| PREDICTED: probable hexaprenyl pyrophosphate synthase,
mitochondrial-like [Glycine max]
Length = 480
Score = 225 bits (574), Expect(2) = 4e-77
Identities = 110/128 (85%), Positives = 122/128 (95%)
Frame = +3
Query: 570 EYGRNLGLAFQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVDRG 749
EYG+NLGLAFQLIDDVLDFTGTSASLGKGSLSDIRHGI+TAPILFAMEEFPQLRT+VD G
Sbjct: 353 EYGKNLGLAFQLIDDVLDFTGTSASLGKGSLSDIRHGIVTAPILFAMEEFPQLRTIVDEG 412
Query: 750 FENPADVDIALDYLGKSNGIRRTRQLATEHAKIAAEAIDSLPESDDEDVLRSRRALVDLT 929
FENPA+VD+AL+YLGKS GI+RTR+LA EHA +AA AIDSLPESDDEDV +SR+AL+DLT
Sbjct: 413 FENPANVDLALEYLGKSRGIQRTRELAVEHANLAAAAIDSLPESDDEDVRKSRKALIDLT 472
Query: 930 HRVITRTK 953
HRVITRTK
Sbjct: 473 HRVITRTK 480
Score = 90.1 bits (222), Expect(2) = 4e-77
Identities = 42/47 (89%), Positives = 46/47 (97%)
Frame = +1
Query: 325 RCSMEYYMQKTYYKTASLISNSCKAIAILTGQTAEVSILAYEYGRNL 465
RCSMEYYMQKTYYKTASLISNSCKAIAIL GQTAEV++LA+EYG+NL
Sbjct: 312 RCSMEYYMQKTYYKTASLISNSCKAIAILAGQTAEVAMLAFEYGKNL 358
Score = 120 bits (300), Expect = 6e-25
Identities = 61/63 (96%), Positives = 63/63 (100%)
Frame = +3
Query: 3 LHDDVLDDADTRRGIGSLNYVMGNKLAVLAGDFLLSRACVALASLKNTEVVSLLAKVVEH 182
LHDDVLDDAD+RRGIGSLN+VMGNKLAVLAGDFLLSRACVALASLKNTEVVSLLAKVVEH
Sbjct: 237 LHDDVLDDADSRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNTEVVSLLAKVVEH 296
Query: 183 LVT 191
LVT
Sbjct: 297 LVT 299
>ref|XP_003550028.1| PREDICTED: probable hexaprenyl pyrophosphate synthase,
mitochondrial-like [Glycine max]
Length = 419
Score = 222 bits (566), Expect(2) = 3e-76
Identities = 108/128 (84%), Positives = 121/128 (94%)
Frame = +3
Query: 570 EYGRNLGLAFQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVDRG 749
EYG+NLGLAFQLIDDVLDFTGTSASLGKGSLSDIRHGI+TAPILFAMEEFPQLR +VD G
Sbjct: 292 EYGKNLGLAFQLIDDVLDFTGTSASLGKGSLSDIRHGIVTAPILFAMEEFPQLRAIVDEG 351
Query: 750 FENPADVDIALDYLGKSNGIRRTRQLATEHAKIAAEAIDSLPESDDEDVLRSRRALVDLT 929
FENPA+VD+AL+YLGKS GI+RTR+LA EHA +AA AIDSLPE+DDEDV +SR+AL+DLT
Sbjct: 352 FENPANVDLALEYLGKSRGIQRTRELAVEHANLAAAAIDSLPENDDEDVRKSRKALIDLT 411
Query: 930 HRVITRTK 953
HRVITRTK
Sbjct: 412 HRVITRTK 419
Score = 90.1 bits (222), Expect(2) = 3e-76
Identities = 42/47 (89%), Positives = 46/47 (97%)
Frame = +1
Query: 325 RCSMEYYMQKTYYKTASLISNSCKAIAILTGQTAEVSILAYEYGRNL 465
RCSMEYYMQKTYYKTASLISNSCKAIAIL GQTAEV++LA+EYG+NL
Sbjct: 251 RCSMEYYMQKTYYKTASLISNSCKAIAILAGQTAEVAMLAFEYGKNL 297
Score = 121 bits (304), Expect = 2e-25
Identities = 62/63 (98%), Positives = 63/63 (100%)
Frame = +3
Query: 3 LHDDVLDDADTRRGIGSLNYVMGNKLAVLAGDFLLSRACVALASLKNTEVVSLLAKVVEH 182
LHDDVLDDADTRRGIGSLN+VMGNKLAVLAGDFLLSRACVALASLKNTEVVSLLAKVVEH
Sbjct: 176 LHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNTEVVSLLAKVVEH 235
Query: 183 LVT 191
LVT
Sbjct: 236 LVT 238
>emb|CAC20852.1| geranyl diphosphat synthase [Quercus robur]
Length = 416
Score = 218 bits (555), Expect(2) = 1e-74
Identities = 109/128 (85%), Positives = 121/128 (94%)
Frame = +3
Query: 570 EYGRNLGLAFQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVDRG 749
EYG+NLGLA+QLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLR VVDRG
Sbjct: 289 EYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLREVVDRG 348
Query: 750 FENPADVDIALDYLGKSNGIRRTRQLATEHAKIAAEAIDSLPESDDEDVLRSRRALVDLT 929
F++PA+VD+ALDYLGKS GI+R R+LA +HA IAAEAIDSLPES+DEDV +SRRAL+DLT
Sbjct: 349 FDDPANVDVALDYLGKSRGIQRARELAKKHANIAAEAIDSLPESNDEDVRKSRRALLDLT 408
Query: 930 HRVITRTK 953
RVITRTK
Sbjct: 409 ERVITRTK 416
Score = 89.0 bits (219), Expect(2) = 1e-74
Identities = 41/47 (87%), Positives = 46/47 (97%)
Frame = +1
Query: 325 RCSMEYYMQKTYYKTASLISNSCKAIAILTGQTAEVSILAYEYGRNL 465
RCSMEYYMQKTYYKTASLISNSCKAIA+L GQT+EV++LAYEYG+NL
Sbjct: 248 RCSMEYYMQKTYYKTASLISNSCKAIALLGGQTSEVAMLAYEYGKNL 294
Score = 121 bits (304), Expect = 2e-25
Identities = 62/63 (98%), Positives = 63/63 (100%)
Frame = +3
Query: 3 LHDDVLDDADTRRGIGSLNYVMGNKLAVLAGDFLLSRACVALASLKNTEVVSLLAKVVEH 182
LHDDVLDDADTRRGIGSLN+VMGNKLAVLAGDFLLSRACVALASLKNTEVVSLLAKVVEH
Sbjct: 173 LHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNTEVVSLLAKVVEH 232
Query: 183 LVT 191
LVT
Sbjct: 233 LVT 235
>ref|XP_002268229.2| PREDICTED: decaprenyl-diphosphate synthase subunit 1 [Vitis
vinifera] gi|296090181|emb|CBI40000.3| unnamed protein
product [Vitis vinifera]
Length = 422
Score = 221 bits (563), Expect(2) = 2e-74
Identities = 110/128 (85%), Positives = 120/128 (93%)
Frame = +3
Query: 570 EYGRNLGLAFQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVDRG 749
EYG+NLGLAFQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFA+EEFPQL VV RG
Sbjct: 295 EYGKNLGLAFQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAIEEFPQLDAVVKRG 354
Query: 750 FENPADVDIALDYLGKSNGIRRTRQLATEHAKIAAEAIDSLPESDDEDVLRSRRALVDLT 929
+NPAD+D+ALDYLGKS GI+RTR+LA +HA +AAEAIDSLPES DEDVLRSRRAL+DLT
Sbjct: 355 LDNPADIDLALDYLGKSRGIQRTRELAMKHANLAAEAIDSLPESGDEDVLRSRRALIDLT 414
Query: 930 HRVITRTK 953
HRVITRTK
Sbjct: 415 HRVITRTK 422
Score = 85.5 bits (210), Expect(2) = 2e-74
Identities = 40/47 (85%), Positives = 45/47 (95%)
Frame = +1
Query: 325 RCSMEYYMQKTYYKTASLISNSCKAIAILTGQTAEVSILAYEYGRNL 465
R SMEYY+QKTYYKTASLISNSCKAIA+L GQTAEVS+LA+EYG+NL
Sbjct: 254 RVSMEYYLQKTYYKTASLISNSCKAIALLAGQTAEVSMLAFEYGKNL 300
Score = 114 bits (284), Expect = 4e-23
Identities = 58/63 (92%), Positives = 61/63 (96%)
Frame = +3
Query: 3 LHDDVLDDADTRRGIGSLNYVMGNKLAVLAGDFLLSRACVALASLKNTEVVSLLAKVVEH 182
LHDDVLDDA+TRRGIGSLN +MGNK+AVLAGDFLLSRACVALASLKNTEVVSLLA VVEH
Sbjct: 179 LHDDVLDDAETRRGIGSLNIMMGNKVAVLAGDFLLSRACVALASLKNTEVVSLLATVVEH 238
Query: 183 LVT 191
LVT
Sbjct: 239 LVT 241
>gb|AAR08151.1| geranyl diphosphate synthase [Vitis vinifera]
Length = 321
Score = 218 bits (555), Expect(2) = 1e-73
Identities = 108/128 (84%), Positives = 119/128 (92%)
Frame = +3
Query: 570 EYGRNLGLAFQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVDRG 749
EYG+NLGLAFQLIDD LDFTGTSASLGKGSLSDIRHGIITAPILFA+EEFPQL VV RG
Sbjct: 194 EYGKNLGLAFQLIDDXLDFTGTSASLGKGSLSDIRHGIITAPILFAIEEFPQLDAVVKRG 253
Query: 750 FENPADVDIALDYLGKSNGIRRTRQLATEHAKIAAEAIDSLPESDDEDVLRSRRALVDLT 929
+NPAD+D+ALDYLG+S GI+RTR+LA +HA +AAEAIDSLPES DEDVLRSRRAL+DLT
Sbjct: 254 LDNPADIDLALDYLGRSRGIQRTRELAMKHANLAAEAIDSLPESGDEDVLRSRRALIDLT 313
Query: 930 HRVITRTK 953
HRVITRTK
Sbjct: 314 HRVITRTK 321
Score = 85.5 bits (210), Expect(2) = 1e-73
Identities = 40/47 (85%), Positives = 45/47 (95%)
Frame = +1
Query: 325 RCSMEYYMQKTYYKTASLISNSCKAIAILTGQTAEVSILAYEYGRNL 465
R SMEYY+QKTYYKTASLISNSCKAIA+L GQTAEVS+LA+EYG+NL
Sbjct: 153 RVSMEYYLQKTYYKTASLISNSCKAIALLAGQTAEVSMLAFEYGKNL 199
Score = 114 bits (284), Expect = 4e-23
Identities = 58/63 (92%), Positives = 61/63 (96%)
Frame = +3
Query: 3 LHDDVLDDADTRRGIGSLNYVMGNKLAVLAGDFLLSRACVALASLKNTEVVSLLAKVVEH 182
LHDDVLDDA+TRRGIGSLN +MGNK+AVLAGDFLLSRACVALASLKNTEVVSLLA VVEH
Sbjct: 78 LHDDVLDDAETRRGIGSLNIMMGNKVAVLAGDFLLSRACVALASLKNTEVVSLLATVVEH 137
Query: 183 LVT 191
LVT
Sbjct: 138 LVT 140