BLASTX nr result

ID: Coptis24_contig00010433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010433
         (1124 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280630.1| PREDICTED: uncharacterized protein LOC100266...   418   e-114
ref|XP_002511031.1| conserved hypothetical protein [Ricinus comm...   406   e-111
emb|CBI38558.3| unnamed protein product [Vitis vinifera]              405   e-111
gb|AET07429.1| Or protein [Ipomoea batatas]                           405   e-110
gb|AEO17754.1| orange protein [Nicotiana tabacum]                     402   e-110

>ref|XP_002280630.1| PREDICTED: uncharacterized protein LOC100266582 [Vitis vinifera]
          Length = 312

 Score =  418 bits (1074), Expect = e-114
 Identities = 213/295 (72%), Positives = 234/295 (79%), Gaps = 2/295 (0%)
 Frame = +2

Query: 47  HNNSTYLNSRFLHVRPKKTNFIKCQSMEPDPSSFP--IDADSIEKNTAAGFCIIEGPETV 220
           H N  Y NSRFL    K     +  + EP+ SSF   +D+DS +KN+  GFCIIEGPETV
Sbjct: 19  HRNYRYSNSRFLQGNLKSNLKWRSMASEPEASSFASSVDSDSSDKNST-GFCIIEGPETV 77

Query: 221 QDFAQMQTQEIQDNIRSRRNKVFLLMXXXXXXXXXXXXXSAELGTLKEEQENEXXXXXXX 400
           QDFA+M+ QEIQDNIRSRRNK+FL M             SAELG LKEEQENE       
Sbjct: 78  QDFAKMELQEIQDNIRSRRNKIFLHMEEVRRLRIQQRIKSAELGILKEEQENELPNFPSF 137

Query: 401 XXXXXXXSAANLKQYYASCFSLIAGIIVFGGLLAPTLELKLGIGGTSYEDFIVNMHLPMQ 580
                  S+ANLK YYA+CFSLIAGII+FGGLLAPTLELKLG+GGTSYEDFI ++HLPMQ
Sbjct: 138 IPFLPPLSSANLKLYYATCFSLIAGIIIFGGLLAPTLELKLGLGGTSYEDFIRSVHLPMQ 197

Query: 581 LSEVDPIVASFSGGAVGVISALMVVEVNNVKQQEHKRCKYCLGTGYLACARCSSTGTLVL 760
           LS+VDPIVASFSGGAVGVISALMVVE+NNVKQQE+KRCKYCLGTGYLACARCSSTG LVL
Sbjct: 198 LSQVDPIVASFSGGAVGVISALMVVEINNVKQQENKRCKYCLGTGYLACARCSSTGALVL 257

Query: 761 TEPVATVNGGDQPLPPPRTERCSNCSGAGKVMCPTCLCTGMAMASEHDPRIDPFD 925
            EPV+TVN G QPL PP+TERCSNCSGAGKVMCPTCLCTGM MASEHDPRIDPFD
Sbjct: 258 IEPVSTVNSGSQPLSPPKTERCSNCSGAGKVMCPTCLCTGMEMASEHDPRIDPFD 312


>ref|XP_002511031.1| conserved hypothetical protein [Ricinus communis]
           gi|223550146|gb|EEF51633.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 313

 Score =  406 bits (1044), Expect = e-111
 Identities = 207/292 (70%), Positives = 230/292 (78%)
 Frame = +2

Query: 50  NNSTYLNSRFLHVRPKKTNFIKCQSMEPDPSSFPIDADSIEKNTAAGFCIIEGPETVQDF 229
           +N  +   RF+ V  K  +  +  + E D SS    +   +KN AAGFCIIEGPETVQDF
Sbjct: 23  HNPHHSTGRFIDVNRKLISKWRSMASELDASSPSSSSFDSDKN-AAGFCIIEGPETVQDF 81

Query: 230 AQMQTQEIQDNIRSRRNKVFLLMXXXXXXXXXXXXXSAELGTLKEEQENEXXXXXXXXXX 409
           A+M+ QEIQDNIRSRRNK+FL M             +AELG L+EEQENE          
Sbjct: 82  AKMELQEIQDNIRSRRNKIFLHMEEVRRLRIQQRIKNAELGILQEEQENELPNFPSFIPF 141

Query: 410 XXXXSAANLKQYYASCFSLIAGIIVFGGLLAPTLELKLGIGGTSYEDFIVNMHLPMQLSE 589
               SAANL+ YYA+CFSLIAGII+FGGLLAP LELKLG+GGTSYEDFI N+HLPMQLS+
Sbjct: 142 LPPLSAANLRLYYATCFSLIAGIIIFGGLLAPALELKLGLGGTSYEDFIRNVHLPMQLSQ 201

Query: 590 VDPIVASFSGGAVGVISALMVVEVNNVKQQEHKRCKYCLGTGYLACARCSSTGTLVLTEP 769
           VDPIVASFSGGAVGVISALMVVE+NNVKQQEHKRCKYCLGTGYLACARCSSTG LVL EP
Sbjct: 202 VDPIVASFSGGAVGVISALMVVEINNVKQQEHKRCKYCLGTGYLACARCSSTGALVLVEP 261

Query: 770 VATVNGGDQPLPPPRTERCSNCSGAGKVMCPTCLCTGMAMASEHDPRIDPFD 925
           V+TV+ GDQPLP P+TERCSNCSGAGKVMCPTCLCTGMAMASEHDPRIDPFD
Sbjct: 262 VSTVSSGDQPLPVPKTERCSNCSGAGKVMCPTCLCTGMAMASEHDPRIDPFD 313


>emb|CBI38558.3| unnamed protein product [Vitis vinifera]
          Length = 270

 Score =  405 bits (1042), Expect = e-111
 Identities = 204/268 (76%), Positives = 223/268 (83%), Gaps = 2/268 (0%)
 Frame = +2

Query: 128 EPDPSSFP--IDADSIEKNTAAGFCIIEGPETVQDFAQMQTQEIQDNIRSRRNKVFLLMX 301
           EP+ SSF   +D+DS +KN+  GFCIIEGPETVQDFA+M+ QEIQDNIRSRRNK+FL M 
Sbjct: 4   EPEASSFASSVDSDSSDKNST-GFCIIEGPETVQDFAKMELQEIQDNIRSRRNKIFLHME 62

Query: 302 XXXXXXXXXXXXSAELGTLKEEQENEXXXXXXXXXXXXXXSAANLKQYYASCFSLIAGII 481
                       SAELG LKEEQENE              S+ANLK YYA+CFSLIAGII
Sbjct: 63  EVRRLRIQQRIKSAELGILKEEQENELPNFPSFIPFLPPLSSANLKLYYATCFSLIAGII 122

Query: 482 VFGGLLAPTLELKLGIGGTSYEDFIVNMHLPMQLSEVDPIVASFSGGAVGVISALMVVEV 661
           +FGGLLAPTLELKLG+GGTSYEDFI ++HLPMQLS+VDPIVASFSGGAVGVISALMVVE+
Sbjct: 123 IFGGLLAPTLELKLGLGGTSYEDFIRSVHLPMQLSQVDPIVASFSGGAVGVISALMVVEI 182

Query: 662 NNVKQQEHKRCKYCLGTGYLACARCSSTGTLVLTEPVATVNGGDQPLPPPRTERCSNCSG 841
           NNVKQQE+KRCKYCLGTGYLACARCSSTG LVL EPV+TVN G QPL PP+TERCSNCSG
Sbjct: 183 NNVKQQENKRCKYCLGTGYLACARCSSTGALVLIEPVSTVNSGSQPLSPPKTERCSNCSG 242

Query: 842 AGKVMCPTCLCTGMAMASEHDPRIDPFD 925
           AGKVMCPTCLCTGM MASEHDPRIDPFD
Sbjct: 243 AGKVMCPTCLCTGMEMASEHDPRIDPFD 270


>gb|AET07429.1| Or protein [Ipomoea batatas]
          Length = 313

 Score =  405 bits (1041), Expect = e-110
 Identities = 212/311 (68%), Positives = 245/311 (78%), Gaps = 3/311 (0%)
 Frame = +2

Query: 2   LSFSHNLTVLKFKLSHNNSTYLNSRF-LHVRPKKTNFIKCQSMEPDPSSFP--IDADSIE 172
           LS S + T   F LS   S + +SR+ LH R K    ++  + + D SSF   +D ++ +
Sbjct: 8   LSLSSSTT--PFHLS--TSPFHSSRYHLHGRLKSRVRLRPMAADADSSSFSSSVDTEAPD 63

Query: 173 KNTAAGFCIIEGPETVQDFAQMQTQEIQDNIRSRRNKVFLLMXXXXXXXXXXXXXSAELG 352
           KN AAGFCIIEGPETVQDFAQM+ +EIQDNIRSRRNK+FL M             +AELG
Sbjct: 64  KN-AAGFCIIEGPETVQDFAQMELKEIQDNIRSRRNKIFLHMEEVRRLRIQQRIKNAELG 122

Query: 353 TLKEEQENEXXXXXXXXXXXXXXSAANLKQYYASCFSLIAGIIVFGGLLAPTLELKLGIG 532
            L E+QEN+              ++ANLKQYYA+CFSLIAG+++FGGLLAPTLELKLG+G
Sbjct: 123 NLNEKQENKLPNFPSFIPFLPPLTSANLKQYYATCFSLIAGVMLFGGLLAPTLELKLGLG 182

Query: 533 GTSYEDFIVNMHLPMQLSEVDPIVASFSGGAVGVISALMVVEVNNVKQQEHKRCKYCLGT 712
           GTSY DFI +MHLPMQLS+VDPIVASFSGGAVGVISALMVVE+NNVKQQEHKRCKYCLGT
Sbjct: 183 GTSYADFIRSMHLPMQLSDVDPIVASFSGGAVGVISALMVVEINNVKQQEHKRCKYCLGT 242

Query: 713 GYLACARCSSTGTLVLTEPVATVNGGDQPLPPPRTERCSNCSGAGKVMCPTCLCTGMAMA 892
           GYLACARCSSTG+LVL EPV+TVN GDQPL PP+TERC+NCSG+GKVMCPTCLCTGMAMA
Sbjct: 243 GYLACARCSSTGSLVLIEPVSTVNRGDQPLSPPKTERCTNCSGSGKVMCPTCLCTGMAMA 302

Query: 893 SEHDPRIDPFD 925
           SEHDPRIDPFD
Sbjct: 303 SEHDPRIDPFD 313


>gb|AEO17754.1| orange protein [Nicotiana tabacum]
          Length = 311

 Score =  402 bits (1033), Expect = e-110
 Identities = 207/290 (71%), Positives = 230/290 (79%), Gaps = 5/290 (1%)
 Frame = +2

Query: 71  SRFLHVRPKK--TNFIKCQSM--EPDPSSFPIDADSIEKN-TAAGFCIIEGPETVQDFAQ 235
           SR+LH R  +  TN IK +SM  + D S+F    DS   + TA GFCIIEGPETV+DFA+
Sbjct: 22  SRYLHRRNLRNNTNNIKWRSMASDADASAFTTSFDSESSDKTAPGFCIIEGPETVEDFAK 81

Query: 236 MQTQEIQDNIRSRRNKVFLLMXXXXXXXXXXXXXSAELGTLKEEQENEXXXXXXXXXXXX 415
           M+ QEI+DNIRSRRNK+FL M             SAELG L +EQENE            
Sbjct: 82  MELQEIRDNIRSRRNKIFLHMEEVRRLRIQQRLKSAELGILTDEQENELPNFPSFIPFLP 141

Query: 416 XXSAANLKQYYASCFSLIAGIIVFGGLLAPTLELKLGIGGTSYEDFIVNMHLPMQLSEVD 595
             ++ANLKQYYA+CFSLIAGI++FGGLLAPTLELKLG+GGTSY DFI +MHLPMQLS+VD
Sbjct: 142 PLTSANLKQYYATCFSLIAGIMLFGGLLAPTLELKLGLGGTSYADFIQSMHLPMQLSQVD 201

Query: 596 PIVASFSGGAVGVISALMVVEVNNVKQQEHKRCKYCLGTGYLACARCSSTGTLVLTEPVA 775
           PIVASFSGGAVGVISALMVVE+NNVKQQEHKRCKYCLGTGYLACARCSSTG LVL EPV+
Sbjct: 202 PIVASFSGGAVGVISALMVVEINNVKQQEHKRCKYCLGTGYLACARCSSTGALVLIEPVS 261

Query: 776 TVNGGDQPLPPPRTERCSNCSGAGKVMCPTCLCTGMAMASEHDPRIDPFD 925
           T NG D+PL PP TERC NCSGAGKVMCPTCLCTGMAMASEHDPRIDPFD
Sbjct: 262 TFNGADKPLSPPNTERCPNCSGAGKVMCPTCLCTGMAMASEHDPRIDPFD 311


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