BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010430
         (1303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265479.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   448   e-123
ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   445   e-122
ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   443   e-122
ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   436   e-120
ref|XP_002456069.1| hypothetical protein SORBIDRAFT_03g029810 [S...   436   e-120

>ref|XP_002265479.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Vitis vinifera]
          Length = 785

 Score =  448 bits (1152), Expect = e-123
 Identities = 234/331 (70%), Positives = 264/331 (79%), Gaps = 17/331 (5%)
 Frame = -2

Query: 1302 LFALRKAKFQGYPAVRPELDLVDPEDQLTHELSLLEDAIDPETSLDIFKADSQFLENERH 1123
            LFA+RKAKFQG+PAVRPELDLV+ EDQLTHE+SL E+ IDPE +LDIFK D QFLE+E+ 
Sbjct: 414  LFAIRKAKFQGHPAVRPELDLVEQEDQLTHEISL-EEKIDPEITLDIFKPDPQFLESEKR 472

Query: 1122 YGELKRSILXXXXXXXXXXXD----------------QDYDEEEEANVKIKDETETDIVN 991
            Y ELK++IL                            +D DEE+E  +KIKDETET++VN
Sbjct: 473  YEELKKTILGEESEDEAGSDAGSDDEDEDEDDDEDDDEDDDEEDEQQMKIKDETETNLVN 532

Query: 990  LRRTIYLTIMSSVDLEEAGHKLLKIKLEQGQEMELCIMLLECCSQERTXXXXXXXXXXXL 811
            LRRTIYLTIMSS+D EEAGHKLLKIKLE GQEMELCIMLLECCSQERT            
Sbjct: 533  LRRTIYLTIMSSIDFEEAGHKLLKIKLEPGQEMELCIMLLECCSQERTYLRYYGLLGQRF 592

Query: 810  CMFSKI-RENFETCFVQQYSSIHQLETNKLRNVAKFFAHLLGTNALPWHVLSYIRLTEED 634
            CM +K+ +ENFE CFVQQYS IH+LETNKLRNVAKFFAHLLGT+ALPWHVL+YIRLTEED
Sbjct: 593  CMINKVHQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLAYIRLTEED 652

Query: 633  TTSSSRIFIKIMFQELSERVGIQLLKERLFDPEMQASFELIFPKDNPKNTRFSINFFTSI 454
            TTSSSRIFIKI+FQELSE +GI+LL ERL DP MQ SFE IFPKDNPKNTRFSINFFTSI
Sbjct: 653  TTSSSRIFIKILFQELSEHLGIRLLNERLTDPSMQDSFESIFPKDNPKNTRFSINFFTSI 712

Query: 453  GLGGITENLREYLKSMPKLIMQQKRTEEVND 361
            GLGGITENLREYLK+MP+LIMQQ++    +D
Sbjct: 713  GLGGITENLREYLKNMPRLIMQQQKPVSESD 743


>ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Glycine max]
          Length = 871

 Score =  445 bits (1144), Expect = e-122
 Identities = 233/319 (73%), Positives = 259/319 (81%), Gaps = 11/319 (3%)
 Frame = -2

Query: 1302 LFALRKAKFQGYPAVRPELDLVDPEDQLTHELSLLEDAIDPETSLDIFKADSQFLENERH 1123
            LFA+RKAKFQGYPAVRPELDLV+ EDQ+THE+SL E+ IDPE SLDIFK D  FLENE+ 
Sbjct: 510  LFAIRKAKFQGYPAVRPELDLVEQEDQITHEVSLDEE-IDPEISLDIFKPDPNFLENEKR 568

Query: 1122 YGELKRSILXXXXXXXXXXXDQDYD----------EEEEANVKIKDETETDIVNLRRTIY 973
            Y ELK+S+L           D + D          EEEE  ++IKDETET++VNLRRTIY
Sbjct: 569  YEELKKSMLGEESEDDEEGLDSESDDDDDEDDESDEEEEEQMQIKDETETNLVNLRRTIY 628

Query: 972  LTIMSSVDLEEAGHKLLKIKLEQGQEMELCIMLLECCSQERTXXXXXXXXXXXLCMFSKI 793
            LTIMSSVD EEAGHKLLKIKLE GQEMELCIMLLECCSQERT            CM +K+
Sbjct: 629  LTIMSSVDFEEAGHKLLKIKLEPGQEMELCIMLLECCSQERTYLRYYGLLGQRFCMINKV 688

Query: 792  -RENFETCFVQQYSSIHQLETNKLRNVAKFFAHLLGTNALPWHVLSYIRLTEEDTTSSSR 616
             +ENFE CFVQQYS IH+LETNKLRNV KFFAHLLGT+ALPWHVLSYIRLTEEDTTSSSR
Sbjct: 689  HQENFEKCFVQQYSMIHRLETNKLRNVGKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSR 748

Query: 615  IFIKIMFQELSERVGIQLLKERLFDPEMQASFELIFPKDNPKNTRFSINFFTSIGLGGIT 436
            IFIKI+FQELSE +GI+LL ERL DP MQ SFE IFPKDNPKNTRF INFFTSIGLGG+T
Sbjct: 749  IFIKILFQELSEHLGIRLLNERLNDPTMQESFESIFPKDNPKNTRFCINFFTSIGLGGLT 808

Query: 435  ENLREYLKSMPKLIMQQKR 379
            ENLREYLK+MP+LIMQQ++
Sbjct: 809  ENLREYLKNMPRLIMQQQK 827


>ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Glycine max]
          Length = 860

 Score =  443 bits (1140), Expect = e-122
 Identities = 233/318 (73%), Positives = 259/318 (81%), Gaps = 10/318 (3%)
 Frame = -2

Query: 1302 LFALRKAKFQGYPAVRPELDLVDPEDQLTHELSLLEDAIDPETSLDIFKADSQFLENERH 1123
            LFA+RKAKFQGYPAVRPELDLV+ EDQ+THE+SL E+ IDPE SLDIFK D  FLENE+ 
Sbjct: 494  LFAIRKAKFQGYPAVRPELDLVEQEDQITHEVSLDEE-IDPEISLDIFKPDPNFLENEKR 552

Query: 1122 YGELKRSILXXXXXXXXXXXD---------QDYDEEEEANVKIKDETETDIVNLRRTIYL 970
            Y ELK+S+L           D          D DEE+E  ++IKDETET++VNLRRTIYL
Sbjct: 553  YEELKKSMLGEESEDDEEGLDAESDDDDEDDDSDEEDEEEMQIKDETETNLVNLRRTIYL 612

Query: 969  TIMSSVDLEEAGHKLLKIKLEQGQEMELCIMLLECCSQERTXXXXXXXXXXXLCMFSKI- 793
            TIMSSVD EEAGHKLLKIKLE GQEMELCIMLLECCSQERT            CM +K+ 
Sbjct: 613  TIMSSVDFEEAGHKLLKIKLEPGQEMELCIMLLECCSQERTYLRYYGLLGQRFCMINKVH 672

Query: 792  RENFETCFVQQYSSIHQLETNKLRNVAKFFAHLLGTNALPWHVLSYIRLTEEDTTSSSRI 613
            +ENFE CFVQQYS IH+LETNKLRNVAKFFAHLLGT+ALPWHVLSYIRLTEEDTTSSSRI
Sbjct: 673  QENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRI 732

Query: 612  FIKIMFQELSERVGIQLLKERLFDPEMQASFELIFPKDNPKNTRFSINFFTSIGLGGITE 433
            FIKI+FQELSE +GI+LL ERL D  MQ SFE IFPKDNPKNTRF INFFTSIGLGG+TE
Sbjct: 733  FIKILFQELSEHLGIRLLNERLNDLTMQESFESIFPKDNPKNTRFCINFFTSIGLGGLTE 792

Query: 432  NLREYLKSMPKLIMQQKR 379
            NLREYLK+MP+LIMQQ++
Sbjct: 793  NLREYLKNMPRLIMQQQK 810


>ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Cucumis sativus]
          Length = 797

 Score =  436 bits (1122), Expect = e-120
 Identities = 228/327 (69%), Positives = 264/327 (80%), Gaps = 13/327 (3%)
 Frame = -2

Query: 1302 LFALRKAKFQGYPAVRPELDLVDPEDQLTHELSLLEDAIDPETSLDIFKADSQFLENERH 1123
            LFA+RKAKF+GYPAVRPELDLV+ EDQLTHE+SL E+ IDPE +LDIFK+D  FLENE+ 
Sbjct: 431  LFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEE-IDPEITLDIFKSDPNFLENEKR 489

Query: 1122 YGELKRSILXXXXXXXXXXXD------QDYDEEEEAN------VKIKDETETDIVNLRRT 979
            Y +LK++IL           D      +D DEE+E+       ++I DETET++VNLRRT
Sbjct: 490  YEDLKKNILGEESEDEEDRSDAGSDESEDEDEEDESEEEDEEQMQINDETETNLVNLRRT 549

Query: 978  IYLTIMSSVDLEEAGHKLLKIKLEQGQEMELCIMLLECCSQERTXXXXXXXXXXXLCMFS 799
            IYLTIMSSVD EEAGHKLLKIKLE GQE+ELC+MLLECCSQERT            C  +
Sbjct: 550  IYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKIN 609

Query: 798  KI-RENFETCFVQQYSSIHQLETNKLRNVAKFFAHLLGTNALPWHVLSYIRLTEEDTTSS 622
            K+ +ENF+ CFVQQYS IH+LETNKLRNVAKFFAHLLGT+ALPWHVLSYIRLTEEDTTSS
Sbjct: 610  KVYQENFDKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSS 669

Query: 621  SRIFIKIMFQELSERVGIQLLKERLFDPEMQASFELIFPKDNPKNTRFSINFFTSIGLGG 442
            SRIFIKI+FQELSE +GI+LL ERL DP MQ SFE IFP+DNPKNTRFSINFFTSIGLGG
Sbjct: 670  SRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGG 729

Query: 441  ITENLREYLKSMPKLIMQQKRTEEVND 361
            +TENLREYLK+MP+LIMQQ++    +D
Sbjct: 730  LTENLREYLKNMPRLIMQQQKPVSDSD 756


>ref|XP_002456069.1| hypothetical protein SORBIDRAFT_03g029810 [Sorghum bicolor]
            gi|241928044|gb|EES01189.1| hypothetical protein
            SORBIDRAFT_03g029810 [Sorghum bicolor]
          Length = 792

 Score =  436 bits (1121), Expect = e-120
 Identities = 224/320 (70%), Positives = 262/320 (81%), Gaps = 10/320 (3%)
 Frame = -2

Query: 1302 LFALRKAKFQGYPAVRPELDLVDPEDQLTHELSLLEDAIDPETSLDIFKADSQFLENERH 1123
            LFA+RKAKFQG+PA+RPELDLV+ EDQ THE+SL ED +DPET+L++F+A+  F+E+E+ 
Sbjct: 429  LFAIRKAKFQGFPAIRPELDLVEQEDQFTHEISL-EDDLDPETNLNVFRANPNFVEDEKA 487

Query: 1122 YGELKRSILXXXXXXXXXXXD---------QDYDEEEEANVKIKDETETDIVNLRRTIYL 970
            Y  LKRSIL           D         ++ DEE+E  ++I+D TET++VNLRRTIYL
Sbjct: 488  YENLKRSILGAESSEDEEGSDAASDDDEDEEESDEEDEEQMEIRDRTETNLVNLRRTIYL 547

Query: 969  TIMSSVDLEEAGHKLLKIKLEQGQEMELCIMLLECCSQERTXXXXXXXXXXXLCMFSKI- 793
            TIMSSVD EEAGHKL+KIKLE GQEMELCIMLLECCSQERT            CM +K+ 
Sbjct: 548  TIMSSVDFEEAGHKLMKIKLEPGQEMELCIMLLECCSQERTYLRYYGLLGQRFCMINKVY 607

Query: 792  RENFETCFVQQYSSIHQLETNKLRNVAKFFAHLLGTNALPWHVLSYIRLTEEDTTSSSRI 613
            +ENFE CFVQQYS IH+LETNKLRNVAKFFAHLLGT+ALPWHVL+YIRLTEEDTTSSSRI
Sbjct: 608  QENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLAYIRLTEEDTTSSSRI 667

Query: 612  FIKIMFQELSERVGIQLLKERLFDPEMQASFELIFPKDNPKNTRFSINFFTSIGLGGITE 433
            FIKI+FQELSE +GI+LL ERL DP MQ SFE IFPKD+PKNTRFSINFFTSIGLGGITE
Sbjct: 668  FIKILFQELSEHLGIRLLNERLNDPNMQGSFESIFPKDHPKNTRFSINFFTSIGLGGITE 727

Query: 432  NLREYLKSMPKLIMQQKRTE 373
            +LREYLK+MP+LIMQQ++ E
Sbjct: 728  SLREYLKNMPRLIMQQQKPE 747