BLASTX nr result

ID: Coptis24_contig00010420 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010420
         (1012 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30031.3| unnamed protein product [Vitis vinifera]              193   5e-47
ref|XP_002299156.1| predicted protein [Populus trichocarpa] gi|2...   187   3e-45
ref|XP_002513432.1| conserved hypothetical protein [Ricinus comm...   186   6e-45
ref|XP_002275316.2| PREDICTED: uncharacterized protein LOC100253...   183   5e-44
ref|XP_002273408.2| PREDICTED: uncharacterized protein LOC100263...   182   9e-44

>emb|CBI30031.3| unnamed protein product [Vitis vinifera]
          Length = 483

 Score =  193 bits (491), Expect = 5e-47
 Identities = 106/205 (51%), Positives = 124/205 (60%), Gaps = 4/205 (1%)
 Frame = -1

Query: 1012 PAGFDASLIGRKVFTRWPDDNNFYEAFITDFK--EGLYALVYDANTPNEAIEWVNFNEIS 839
            P  +D  LIGRKV T WP+DNNFYEA ITD+   EGL+ALVYD NT NE  EWV+  EIS
Sbjct: 240  PGTYDP-LIGRKVMTLWPEDNNFYEAVITDYNPLEGLHALVYDINTTNETWEWVDLKEIS 298

Query: 838  PEDIRWEGGDPGIFNRGGRVGPGHGIKKSVAHSGALPGVKRGRGRPPSKLKKDVPPSQNG 659
            PEDI+WEG DPGI  +GGR G G G+K+S +   ALP   RGRG    +  ++ PPSQNG
Sbjct: 299  PEDIQWEGEDPGISRQGGRGGQGRGVKRSTSRGVALPSAGRGRGSTKVQSNREFPPSQNG 358

Query: 658  TVKKA--SDNIEILRTDTLIKEVEKIFGGSRPDPXXXXXXXXXXXXXXXXXXXXXXXXXX 485
              KK   SD+IEI  TDTLIKEVE++FG S PDP                          
Sbjct: 359  IGKKVSDSDDIEIFHTDTLIKEVERVFGASHPDPVELEKAKKMLKEHEQALVDAISRLGD 418

Query: 484  ASDGRDEGERPLSLGPSTQRELG*R 410
            ASDG  + E+PLS G    RE G R
Sbjct: 419  ASDGESDEEQPLSRGQRMDREQGWR 443


>ref|XP_002299156.1| predicted protein [Populus trichocarpa] gi|222846414|gb|EEE83961.1|
           predicted protein [Populus trichocarpa]
          Length = 399

 Score =  187 bits (476), Expect = 3e-45
 Identities = 92/145 (63%), Positives = 108/145 (74%), Gaps = 2/145 (1%)
 Frame = -1

Query: 991 LIGRKVFTRWPDDNNFYEAFITDFK--EGLYALVYDANTPNEAIEWVNFNEISPEDIRWE 818
           LIG+KV+TRWP+DN+FYEA ITD+   EG +ALVYD NT +E  EWVN  EISPEDIRWE
Sbjct: 220 LIGKKVWTRWPEDNHFYEAVITDYNPVEGRHALVYDINTGDETWEWVNLKEISPEDIRWE 279

Query: 817 GGDPGIFNRGGRVGPGHGIKKSVAHSGALPGVKRGRGRPPSKLKKDVPPSQNGTVKKASD 638
           G +PG+F RGGR GPG G KK++A  GA+    RGRG    + KKD P  QNG  KKA  
Sbjct: 280 GEEPGLFRRGGRPGPGRGNKKAIARGGAVVTAGRGRGTTKGQSKKDFPLIQNGIGKKAMG 339

Query: 637 NIEILRTDTLIKEVEKIFGGSRPDP 563
           +IEIL T+TLIKEVEK+FG S PDP
Sbjct: 340 DIEILHTNTLIKEVEKVFGASHPDP 364


>ref|XP_002513432.1| conserved hypothetical protein [Ricinus communis]
           gi|223547340|gb|EEF48835.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 402

 Score =  186 bits (473), Expect = 6e-45
 Identities = 91/145 (62%), Positives = 108/145 (74%), Gaps = 2/145 (1%)
 Frame = -1

Query: 991 LIGRKVFTRWPDDNNFYEAFITDFK--EGLYALVYDANTPNEAIEWVNFNEISPEDIRWE 818
           LIGRKV+TRWP+DN+FYEA ITD+K  EG +ALVYD NT +E  EWVN  EISPEDIRW+
Sbjct: 223 LIGRKVWTRWPEDNHFYEAVITDYKPAEGRHALVYDINTADETWEWVNLKEISPEDIRWK 282

Query: 817 GGDPGIFNRGGRVGPGHGIKKSVAHSGALPGVKRGRGRPPSKLKKDVPPSQNGTVKKASD 638
             D G+F RGGR GPG G KKS+AH G L G  RGRG    + +K+ P +QNG  +KA D
Sbjct: 283 DEDQGVFRRGGRPGPGRGNKKSMAHGGGLGGAGRGRGTMKGQSRKEFPLAQNGIGRKALD 342

Query: 637 NIEILRTDTLIKEVEKIFGGSRPDP 563
           +IEIL TDTLIKEVEK+F  +  DP
Sbjct: 343 DIEILHTDTLIKEVEKVFSANHADP 367


>ref|XP_002275316.2| PREDICTED: uncharacterized protein LOC100253804 [Vitis vinifera]
          Length = 431

 Score =  183 bits (465), Expect = 5e-44
 Identities = 93/154 (60%), Positives = 109/154 (70%), Gaps = 4/154 (2%)
 Frame = -1

Query: 1012 PAGFDASLIGRKVFTRWPDDNNFYEAFITDFK--EGLYALVYDANTPNEAIEWVNFNEIS 839
            P  +D  LIGRKV T WP+DNNFYEA ITD+   EGL+ALVYD NT NE  EWV+  EIS
Sbjct: 240  PGTYDP-LIGRKVMTLWPEDNNFYEAVITDYNPLEGLHALVYDINTTNETWEWVDLKEIS 298

Query: 838  PEDIRWEGGDPGIFNRGGRVGPGHGIKKSVAHSGALPGVKRGRGRPPSKLKKDVPPSQNG 659
            PEDI+WEG DPGI  +GGR G G G+K+S +   ALP   RGRG    +  ++ PPSQNG
Sbjct: 299  PEDIQWEGEDPGISRQGGRGGQGRGVKRSTSRGVALPSAGRGRGSTKVQSNREFPPSQNG 358

Query: 658  TVKKA--SDNIEILRTDTLIKEVEKIFGGSRPDP 563
              KK   SD+IEI  TDTLIKEVE++FG S PDP
Sbjct: 359  IGKKVSDSDDIEIFHTDTLIKEVERVFGASHPDP 392


>ref|XP_002273408.2| PREDICTED: uncharacterized protein LOC100263217 [Vitis vinifera]
          Length = 424

 Score =  182 bits (463), Expect = 9e-44
 Identities = 103/199 (51%), Positives = 120/199 (60%), Gaps = 3/199 (1%)
 Frame = -1

Query: 1009 AGFDASLIGRKVFTRWPDDNNFYEAFITDFK--EGLYALVYDANTPNEAIEWVNFNEISP 836
            A FD  LIGRKV TRWPDDNNFYEA ITD+   EG +ALVYD  + NE  EWVN +EISP
Sbjct: 228  ATFDP-LIGRKVRTRWPDDNNFYEAVITDYNPVEGRHALVYDMGSANETWEWVNLSEISP 286

Query: 835  EDIRWEGGDPGIFNRGGRVGPGHGIKKSVAHSGALPGVKRGRGRPPSKLKKDVPPSQNGT 656
            EDI+W+G DPGI  RGG  G GHG+ ++V    ++ G  RGRG P  + KKD  PSQNG 
Sbjct: 287  EDIQWDGEDPGISRRGGYDGSGHGMNRAVGRD-SVQGAGRGRGLPKGQSKKDFLPSQNGI 345

Query: 655  VKKASDNIEILRTDTLIKEVEKIFGGSRPDPXXXXXXXXXXXXXXXXXXXXXXXXXXASD 476
             KKA D+I+IL TDTLIKEVE++F  + PDP                           SD
Sbjct: 346  GKKAPDDIQILHTDTLIKEVERVFTANHPDPLEIDKAKKVLKEHEQALLDAIGRLADISD 405

Query: 475  GR-DEGERPLSLGPSTQRE 422
            G  DEG    S G S  RE
Sbjct: 406  GESDEGGHQFSHGHSMDRE 424


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