BLASTX nr result

ID: Coptis24_contig00010419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010419
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631915.1| PREDICTED: uncharacterized protein LOC100854...    69   6e-10
emb|CBI37545.3| unnamed protein product [Vitis vinifera]               69   6e-10

>ref|XP_003631915.1| PREDICTED: uncharacterized protein LOC100854361 [Vitis vinifera]
          Length = 267

 Score = 68.6 bits (166), Expect = 6e-10
 Identities = 44/130 (33%), Positives = 65/130 (50%)
 Frame = +2

Query: 5   EQHRVNSRVLCLLGSIPARPALAAEHPSPMNAGKGSKGSSLFPNIDGSSIRVKAEVTVRC 184
           +Q +  SR   LL SIP+RPA AAEHP   N  + +  + L  ++               
Sbjct: 146 QQTKYYSRFQQLLESIPSRPASAAEHPGSSNGLRKNTRTVLCASVGVG------------ 193

Query: 185 GCTEEALSGNLGEFLYLCCYGCKYPRQELQKEPAVCGSSGLTFIFLLGVVTPLMWVFFFS 364
           GCTEEALS  L E   L   GC   R+   ++ A        F+  LG+++ LMWVF  +
Sbjct: 194 GCTEEALSDKL-ELSCLGYCGCNLHRRREFRKEAALWDGNFMFVLFLGMLSALMWVFIAA 252

Query: 365 MVVRLG*YTW 394
           ++++LG + W
Sbjct: 253 ILMKLGRFAW 262


>emb|CBI37545.3| unnamed protein product [Vitis vinifera]
          Length = 560

 Score = 68.6 bits (166), Expect = 6e-10
 Identities = 44/130 (33%), Positives = 65/130 (50%)
 Frame = +2

Query: 5   EQHRVNSRVLCLLGSIPARPALAAEHPSPMNAGKGSKGSSLFPNIDGSSIRVKAEVTVRC 184
           +Q +  SR   LL SIP+RPA AAEHP   N  + +  + L  ++               
Sbjct: 439 QQTKYYSRFQQLLESIPSRPASAAEHPGSSNGLRKNTRTVLCASVGVG------------ 486

Query: 185 GCTEEALSGNLGEFLYLCCYGCKYPRQELQKEPAVCGSSGLTFIFLLGVVTPLMWVFFFS 364
           GCTEEALS  L E   L   GC   R+   ++ A        F+  LG+++ LMWVF  +
Sbjct: 487 GCTEEALSDKL-ELSCLGYCGCNLHRRREFRKEAALWDGNFMFVLFLGMLSALMWVFIAA 545

Query: 365 MVVRLG*YTW 394
           ++++LG + W
Sbjct: 546 ILMKLGRFAW 555


Top