BLASTX nr result

ID: Coptis24_contig00010410 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010410
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279863.2| PREDICTED: putative E3 ubiquitin-protein lig...   237   8e-61
emb|CBI19874.3| unnamed protein product [Vitis vinifera]              237   8e-61
emb|CAN74785.1| hypothetical protein VITISV_011516 [Vitis vinifera]   237   8e-61
ref|XP_003536276.1| PREDICTED: uncharacterized protein LOC100776...   229   2e-58
ref|XP_004136490.1| PREDICTED: putative E3 ubiquitin-protein lig...   227   9e-58

>ref|XP_002279863.2| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis
           vinifera]
          Length = 1494

 Score =  237 bits (604), Expect = 8e-61
 Identities = 110/126 (87%), Positives = 121/126 (96%)
 Frame = +1

Query: 1   QVCAMLNSRQKTAGVPNFYLSAWSHLYLAFLWKLRNNVRNSVLHILEMFIVDPFFSRIDF 180
           QVCAMLNS Q+TAGVPNFYLSAW+HL L++LW+LR+NV NSVLHILEMFIVDPFFSRIDF
Sbjct: 102 QVCAMLNSDQRTAGVPNFYLSAWAHLNLSYLWRLRDNVHNSVLHILEMFIVDPFFSRIDF 161

Query: 181 APELWKTMFLPHMSSIVGWYSESRHRLVMEVIPDSNDLSFTADFDQFFNESIIFSMRPDQ 360
           APELWK +FLPHMSSIVGWYSE+RHR+VMEVIPDS DLSFTADFDQFFNES+IFSMRPDQ
Sbjct: 162 APELWKALFLPHMSSIVGWYSEARHRIVMEVIPDSTDLSFTADFDQFFNESLIFSMRPDQ 221

Query: 361 AEKLQK 378
           AEK+QK
Sbjct: 222 AEKMQK 227


>emb|CBI19874.3| unnamed protein product [Vitis vinifera]
          Length = 1510

 Score =  237 bits (604), Expect = 8e-61
 Identities = 110/126 (87%), Positives = 121/126 (96%)
 Frame = +1

Query: 1   QVCAMLNSRQKTAGVPNFYLSAWSHLYLAFLWKLRNNVRNSVLHILEMFIVDPFFSRIDF 180
           QVCAMLNS Q+TAGVPNFYLSAW+HL L++LW+LR+NV NSVLHILEMFIVDPFFSRIDF
Sbjct: 118 QVCAMLNSDQRTAGVPNFYLSAWAHLNLSYLWRLRDNVHNSVLHILEMFIVDPFFSRIDF 177

Query: 181 APELWKTMFLPHMSSIVGWYSESRHRLVMEVIPDSNDLSFTADFDQFFNESIIFSMRPDQ 360
           APELWK +FLPHMSSIVGWYSE+RHR+VMEVIPDS DLSFTADFDQFFNES+IFSMRPDQ
Sbjct: 178 APELWKALFLPHMSSIVGWYSEARHRIVMEVIPDSTDLSFTADFDQFFNESLIFSMRPDQ 237

Query: 361 AEKLQK 378
           AEK+QK
Sbjct: 238 AEKMQK 243


>emb|CAN74785.1| hypothetical protein VITISV_011516 [Vitis vinifera]
          Length = 1494

 Score =  237 bits (604), Expect = 8e-61
 Identities = 110/126 (87%), Positives = 121/126 (96%)
 Frame = +1

Query: 1   QVCAMLNSRQKTAGVPNFYLSAWSHLYLAFLWKLRNNVRNSVLHILEMFIVDPFFSRIDF 180
           QVCAMLNS Q+TAGVPNFYLSAW+HL L++LW+LR+NV NSVLHILEMFIVDPFFSRIDF
Sbjct: 102 QVCAMLNSDQRTAGVPNFYLSAWAHLNLSYLWRLRDNVHNSVLHILEMFIVDPFFSRIDF 161

Query: 181 APELWKTMFLPHMSSIVGWYSESRHRLVMEVIPDSNDLSFTADFDQFFNESIIFSMRPDQ 360
           APELWK +FLPHMSSIVGWYSE+RHR+VMEVIPDS DLSFTADFDQFFNES+IFSMRPDQ
Sbjct: 162 APELWKALFLPHMSSIVGWYSEARHRIVMEVIPDSTDLSFTADFDQFFNESLIFSMRPDQ 221

Query: 361 AEKLQK 378
           AEK+QK
Sbjct: 222 AEKMQK 227


>ref|XP_003536276.1| PREDICTED: uncharacterized protein LOC100776142 [Glycine max]
          Length = 1481

 Score =  229 bits (583), Expect = 2e-58
 Identities = 105/126 (83%), Positives = 117/126 (92%)
 Frame = +1

Query: 1   QVCAMLNSRQKTAGVPNFYLSAWSHLYLAFLWKLRNNVRNSVLHILEMFIVDPFFSRIDF 180
           QVCAMLN +QKTAGVPN+YLSAW+HL L++LWKLRNNV+N V H LEMFIVDPFFSRIDF
Sbjct: 102 QVCAMLNPKQKTAGVPNYYLSAWAHLNLSYLWKLRNNVQNCVFHALEMFIVDPFFSRIDF 161

Query: 181 APELWKTMFLPHMSSIVGWYSESRHRLVMEVIPDSNDLSFTADFDQFFNESIIFSMRPDQ 360
           APELWK +FLPHMSSIVGWYSE RHRL+MEVIPDS+DLSFTADFDQFFNES++FSMRP Q
Sbjct: 162 APELWKNLFLPHMSSIVGWYSEERHRLMMEVIPDSSDLSFTADFDQFFNESLVFSMRPHQ 221

Query: 361 AEKLQK 378
            +KLQK
Sbjct: 222 LDKLQK 227


>ref|XP_004136490.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Cucumis
           sativus]
          Length = 1489

 Score =  227 bits (578), Expect = 9e-58
 Identities = 105/126 (83%), Positives = 117/126 (92%)
 Frame = +1

Query: 1   QVCAMLNSRQKTAGVPNFYLSAWSHLYLAFLWKLRNNVRNSVLHILEMFIVDPFFSRIDF 180
           QVCA+LNS +KTAGVPNFYL+AW+HL L++LWKLR N  NSVLHILEMFIVDPFFSR DF
Sbjct: 102 QVCALLNSNEKTAGVPNFYLAAWAHLNLSYLWKLRGNAHNSVLHILEMFIVDPFFSRNDF 161

Query: 181 APELWKTMFLPHMSSIVGWYSESRHRLVMEVIPDSNDLSFTADFDQFFNESIIFSMRPDQ 360
           APELWK +FLPHMSSIVGWYSE RHRL++EVIPDS+DLSFTAD DQFFNES+IFS+RPDQ
Sbjct: 162 APELWKELFLPHMSSIVGWYSEERHRLMIEVIPDSSDLSFTADLDQFFNESLIFSLRPDQ 221

Query: 361 AEKLQK 378
           AEKLQK
Sbjct: 222 AEKLQK 227


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