BLASTX nr result

ID: Coptis24_contig00010409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010409
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510542.1| hypothetical protein RCOM_1598060 [Ricinus c...   157   1e-36
ref|XP_002279863.2| PREDICTED: putative E3 ubiquitin-protein lig...   156   2e-36
emb|CBI19874.3| unnamed protein product [Vitis vinifera]              156   2e-36
emb|CAN74785.1| hypothetical protein VITISV_011516 [Vitis vinifera]   156   2e-36
ref|XP_003536276.1| PREDICTED: uncharacterized protein LOC100776...   152   4e-35

>ref|XP_002510542.1| hypothetical protein RCOM_1598060 [Ricinus communis]
           gi|223551243|gb|EEF52729.1| hypothetical protein
           RCOM_1598060 [Ricinus communis]
          Length = 1427

 Score =  157 bits (396), Expect = 1e-36
 Identities = 78/119 (65%), Positives = 93/119 (78%), Gaps = 1/119 (0%)
 Frame = -3

Query: 378 EKLQKLEQVYGQSLDDNTKLYAKYYKDCMNSDATVSKKVAPMLPIAEPPMTPLHEVSRSI 199
           EKLQKLEQ+YG+SL +NT+L+AKYY+DCMNSD+  SKK+APMLPIAEPPMTPLHEVSRSI
Sbjct: 223 EKLQKLEQLYGESLGENTRLFAKYYEDCMNSDSITSKKIAPMLPIAEPPMTPLHEVSRSI 282

Query: 198 PDFVKFGPILPKSAGFSPFL-NKGDEKDCCRPNTIPSPIEELEESAKWSPKMCSPEENE 25
           PD+VKFGPILPKSAGFSP + +K   ++  R +  PS    LEES  W  +     ENE
Sbjct: 283 PDYVKFGPILPKSAGFSPVVRSKYGAREAGRLSASPSLSHNLEESTVWDTQESILNENE 341


>ref|XP_002279863.2| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis
           vinifera]
          Length = 1494

 Score =  156 bits (394), Expect = 2e-36
 Identities = 75/121 (61%), Positives = 92/121 (76%), Gaps = 1/121 (0%)
 Frame = -3

Query: 378 EKLQKLEQVYGQSLDDNTKLYAKYYKDCMNSDATVSKKVAPMLPIAEPPMTPLHEVSRSI 199
           EK+QKLEQ+YG+SLD+NT+LY+KYY DC+N D+  SK+  PMLPIAEPPMTP+HEVSRSI
Sbjct: 223 EKMQKLEQLYGESLDENTRLYSKYYMDCLNFDSNTSKRAIPMLPIAEPPMTPMHEVSRSI 282

Query: 198 PDFVKFGPILPKSAGFSPFLN-KGDEKDCCRPNTIPSPIEELEESAKWSPKMCSPEENER 22
           PD+VKFGPILPKSAGFS  L  K + ++ CR N      + LEES  W  +  + EENE 
Sbjct: 283 PDYVKFGPILPKSAGFSLILKAKDNAREACRLNVTSKSSQNLEESVMWDLQEETIEENED 342

Query: 21  N 19
           N
Sbjct: 343 N 343


>emb|CBI19874.3| unnamed protein product [Vitis vinifera]
          Length = 1510

 Score =  156 bits (394), Expect = 2e-36
 Identities = 75/121 (61%), Positives = 92/121 (76%), Gaps = 1/121 (0%)
 Frame = -3

Query: 378 EKLQKLEQVYGQSLDDNTKLYAKYYKDCMNSDATVSKKVAPMLPIAEPPMTPLHEVSRSI 199
           EK+QKLEQ+YG+SLD+NT+LY+KYY DC+N D+  SK+  PMLPIAEPPMTP+HEVSRSI
Sbjct: 239 EKMQKLEQLYGESLDENTRLYSKYYMDCLNFDSNTSKRAIPMLPIAEPPMTPMHEVSRSI 298

Query: 198 PDFVKFGPILPKSAGFSPFLN-KGDEKDCCRPNTIPSPIEELEESAKWSPKMCSPEENER 22
           PD+VKFGPILPKSAGFS  L  K + ++ CR N      + LEES  W  +  + EENE 
Sbjct: 299 PDYVKFGPILPKSAGFSLILKAKDNAREACRLNVTSKSSQNLEESVMWDLQEETIEENED 358

Query: 21  N 19
           N
Sbjct: 359 N 359


>emb|CAN74785.1| hypothetical protein VITISV_011516 [Vitis vinifera]
          Length = 1494

 Score =  156 bits (394), Expect = 2e-36
 Identities = 75/121 (61%), Positives = 92/121 (76%), Gaps = 1/121 (0%)
 Frame = -3

Query: 378 EKLQKLEQVYGQSLDDNTKLYAKYYKDCMNSDATVSKKVAPMLPIAEPPMTPLHEVSRSI 199
           EK+QKLEQ+YG+SLD+NT+LY+KYY DC+N D+  SK+  PMLPIAEPPMTP+HEVSRSI
Sbjct: 223 EKMQKLEQLYGESLDENTRLYSKYYMDCLNFDSNTSKRAIPMLPIAEPPMTPMHEVSRSI 282

Query: 198 PDFVKFGPILPKSAGFSPFLN-KGDEKDCCRPNTIPSPIEELEESAKWSPKMCSPEENER 22
           PD+VKFGPILPKSAGFS  L  K + ++ CR N      + LEES  W  +  + EENE 
Sbjct: 283 PDYVKFGPILPKSAGFSLILKAKDNAREACRLNVTSKSSQNLEESVMWDLQEETIEENED 342

Query: 21  N 19
           N
Sbjct: 343 N 343


>ref|XP_003536276.1| PREDICTED: uncharacterized protein LOC100776142 [Glycine max]
          Length = 1481

 Score =  152 bits (383), Expect = 4e-35
 Identities = 78/127 (61%), Positives = 97/127 (76%), Gaps = 3/127 (2%)
 Frame = -3

Query: 378 EKLQKLEQVYGQSLDDNTKLYAKYYKDCMNSDATVSKKVAPMLPIAEPPMTPLHEVSRSI 199
           +KLQK+EQ+YG+SLD+NT+LYAKYYKDCMNSD+T  KKVAPMLPIAEPPMTP+HE+SRS+
Sbjct: 223 DKLQKMEQLYGESLDENTRLYAKYYKDCMNSDSTSGKKVAPMLPIAEPPMTPMHELSRSV 282

Query: 198 PDFVKFGPILPKSAGFS-PFLNKGDEKDCCRPNTIPSPIEELEESAKWSPK--MCSPEEN 28
           PDFVKFGPILPKSAGFS    +K    +  R N+  S   ++E+S+ W  K  +    EN
Sbjct: 283 PDFVKFGPILPKSAGFSLTPRSKDGVNETIRDNSTSSH-SKVEKSSIWGAKESIVKENEN 341

Query: 27  ERNFGSE 7
           E +  SE
Sbjct: 342 EEDLDSE 348


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