BLASTX nr result

ID: Coptis24_contig00010400 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010400
         (1379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284021.1| PREDICTED: presenilin-like protein At2g29900...   478   e-132
emb|CBI15118.3| unnamed protein product [Vitis vinifera]              477   e-132
ref|XP_002328639.1| predicted protein [Populus trichocarpa] gi|2...   463   e-128
ref|XP_004137432.1| PREDICTED: presenilin-like protein At2g29900...   454   e-125
ref|XP_004137433.1| PREDICTED: presenilin-like protein At2g29900...   453   e-125

>ref|XP_002284021.1| PREDICTED: presenilin-like protein At2g29900-like [Vitis vinifera]
          Length = 410

 Score =  478 bits (1229), Expect = e-132
 Identities = 259/423 (61%), Positives = 303/423 (71%), Gaps = 13/423 (3%)
 Frame = -3

Query: 1314 MSPNPKTTSILDSIGEEIVRIITPVSICMFLVVLLVTILNTDXXXXXXXXXXXXA--YNE 1141
            M+ N +  SI++S+GEEI+RII+PVSICMFLVVLLVTILN+D               Y+E
Sbjct: 1    MAQNRRPRSIIESLGEEIIRIISPVSICMFLVVLLVTILNSDTSSSSSSVSTIATIAYSE 60

Query: 1140 NTSDTFWDKLTGALLNSXXXXXXXXXXXXXXXXXFYIGCTKFLKYYMGFSSFVVLGFMGG 961
            ++SD+ WDK  GALLNS                 FY+ CTKFLKYYMGFSSF+VLGFMGG
Sbjct: 61   DSSDSTWDKFKGALLNSLVFVGVVTVVTFLLVLLFYLRCTKFLKYYMGFSSFIVLGFMGG 120

Query: 960  EIAVILVQKFSVPIDCVTFSVLLFNFAVVGVMSIFMSKMAILITQSYLVVIGMLVAYWFT 781
            EI + L+Q FS PIDC+TF V+LFNF VVGV+++FMSKMAIL+TQ YLVVIGMLVAYWFT
Sbjct: 121  EITLFLIQDFSFPIDCITFLVVLFNFTVVGVLAVFMSKMAILVTQGYLVVIGMLVAYWFT 180

Query: 780  LLPEWTTWALLVAMALYDXXXXXXXXXXXXXXXXLAISRDEEIPALVYEARPITNNNVGP 601
            LLPEWTTW LLVAMALYD                LAISRDE+IPALVYEARP+T  +  P
Sbjct: 181  LLPEWTTWVLLVAMALYDLAAVLLPGGPLRLLVELAISRDEDIPALVYEARPVTYQDSCP 240

Query: 600  MQRVVERRSWKGRRSADPDTAESSNASSSLGVLLSSEDRQNETRVVIAQESQVS-GDSEL 424
               V +RR+W+ RR    + +E+SN                ET +V A+E +VS G+SEL
Sbjct: 241  GGGVAQRRAWRERRGVGSNLSENSN-------------NLQETSLVNAEEGRVSEGNSEL 287

Query: 423  SAPLI----------PQEMVQSESWPMDGIGLGSSGAIKLGLGDFIFYSVLVGRAAMYDF 274
              PLI           ++ V +E+ P +GIGLGSSGAIKLGLGDFIFYSVLVGRAAMYDF
Sbjct: 288  VVPLIDHRINVGEHGQEDSVSTENLPFEGIGLGSSGAIKLGLGDFIFYSVLVGRAAMYDF 347

Query: 273  MTVYACYLAIIAGLGITLMLLAFYQKALPALPVSILLGVVFYFLTRILLEIFVVQCSVNL 94
            MTVYACYLAIIAGLG+TLMLLA YQKALPALPVSILLGV+FYF TR LLE F+VQCS+NL
Sbjct: 348  MTVYACYLAIIAGLGVTLMLLAIYQKALPALPVSILLGVLFYFFTRFLLEAFIVQCSLNL 407

Query: 93   FMF 85
             MF
Sbjct: 408  LMF 410


>emb|CBI15118.3| unnamed protein product [Vitis vinifera]
          Length = 442

 Score =  477 bits (1227), Expect = e-132
 Identities = 256/423 (60%), Positives = 303/423 (71%), Gaps = 12/423 (2%)
 Frame = -3

Query: 1317 PMSPNPKTTSILDSIGEEIVRIITPVSICMFLVVLLVTILNTDXXXXXXXXXXXXA--YN 1144
            PM+ N +  SI++S+GEEI+RII+PVSICMFLVVLLVTILN+D               Y+
Sbjct: 32   PMAQNRRPRSIIESLGEEIIRIISPVSICMFLVVLLVTILNSDTSSSSSSVSTIATIAYS 91

Query: 1143 ENTSDTFWDKLTGALLNSXXXXXXXXXXXXXXXXXFYIGCTKFLKYYMGFSSFVVLGFMG 964
            E++SD+ WDK  GALLNS                 FY+ CTKFLKYYMGFSSF+VLGFMG
Sbjct: 92   EDSSDSTWDKFKGALLNSLVFVGVVTVVTFLLVLLFYLRCTKFLKYYMGFSSFIVLGFMG 151

Query: 963  GEIAVILVQKFSVPIDCVTFSVLLFNFAVVGVMSIFMSKMAILITQSYLVVIGMLVAYWF 784
            GEI + L+Q FS PIDC+TF V+LFNF VVGV+++FMSKMAIL+TQ YLVVIGMLVAYWF
Sbjct: 152  GEITLFLIQDFSFPIDCITFLVVLFNFTVVGVLAVFMSKMAILVTQGYLVVIGMLVAYWF 211

Query: 783  TLLPEWTTWALLVAMALYDXXXXXXXXXXXXXXXXLAISRDEEIPALVYEARPITNNNVG 604
            TLLPEWTTW LLVAMALYD                LAISRDE+IPALVYEARP+T  +  
Sbjct: 212  TLLPEWTTWVLLVAMALYDLAAVLLPGGPLRLLVELAISRDEDIPALVYEARPVTYQDSC 271

Query: 603  PMQRVVERRSWKGRRSADPDTAESSNASSSLGVLLSSEDRQNETRVVIAQESQVSGDSEL 424
            P   V +RR+W+ RR    + +E+SN  ++  V ++ + R +E            G+SEL
Sbjct: 272  PGGGVAQRRAWRERRGVGSNLSENSNNLATSDVNVNPDGRVSE------------GNSEL 319

Query: 423  SAPLI----------PQEMVQSESWPMDGIGLGSSGAIKLGLGDFIFYSVLVGRAAMYDF 274
              PLI           ++ V +E+ P +GIGLGSSGAIKLGLGDFIFYSVLVGRAAMYDF
Sbjct: 320  VVPLIDHRINVGEHGQEDSVSTENLPFEGIGLGSSGAIKLGLGDFIFYSVLVGRAAMYDF 379

Query: 273  MTVYACYLAIIAGLGITLMLLAFYQKALPALPVSILLGVVFYFLTRILLEIFVVQCSVNL 94
            MTVYACYLAIIAGLG+TLMLLA YQKALPALPVSILLGV+FYF TR LLE F+VQCS+NL
Sbjct: 380  MTVYACYLAIIAGLGVTLMLLAIYQKALPALPVSILLGVLFYFFTRFLLEAFIVQCSLNL 439

Query: 93   FMF 85
             MF
Sbjct: 440  LMF 442


>ref|XP_002328639.1| predicted protein [Populus trichocarpa] gi|222838815|gb|EEE77166.1|
            predicted protein [Populus trichocarpa]
          Length = 408

 Score =  463 bits (1191), Expect = e-128
 Identities = 252/423 (59%), Positives = 298/423 (70%), Gaps = 13/423 (3%)
 Frame = -3

Query: 1314 MSPNPKTTSILDSIGEEIVRIITPVSICMFLVVLLVTILNTDXXXXXXXXXXXXA--YNE 1141
            M+ N +  S+LDS+GEE+VRIITPVSICMFLVV+LV+ILNTD               YNE
Sbjct: 1    MAQNRRPKSVLDSLGEELVRIITPVSICMFLVVVLVSILNTDSSSSASSINTIATIAYNE 60

Query: 1140 NTSDTFWDKLTGALLNSXXXXXXXXXXXXXXXXXFYIGCTKFLKYYMGFSSFVVLGFMGG 961
             TSD+FWDK  GAL+NS                 FY+ CT FLK YMGFSSF+VLGFMGG
Sbjct: 61   TTSDSFWDKFKGALINSLIFVAIITLVTFVLVILFYLRCTHFLKLYMGFSSFLVLGFMGG 120

Query: 960  EIAVILVQKFSVPIDCVTFSVLLFNFAVVGVMSIFMSKMAILITQSYLVVIGMLVAYWFT 781
            EIA+ L+  F++PID +TF V+LFNFA VGV+++FMSKMAI +TQ YLVVIG+LVAYWFT
Sbjct: 121  EIALFLIGDFNIPIDSITFLVILFNFASVGVLAVFMSKMAIFVTQGYLVVIGVLVAYWFT 180

Query: 780  LLPEWTTWALLVAMALYDXXXXXXXXXXXXXXXXLAISRDEEIPALVYEARPITNNNVGP 601
            LLPEWTTW LLVA+ALYD                LAISRDE+IPALVYEARP+TN++ G 
Sbjct: 181  LLPEWTTWVLLVALALYDLAAVLLPVGPLRILVELAISRDEDIPALVYEARPVTNHDSGS 240

Query: 600  MQRVVERRSWKGRRSADPDTAESSNASSSLGVLLSSEDRQNETRVVIAQESQV-SGDSEL 424
               VV RR W+ R S    + E+ N+               ET   + ++ QV   ++EL
Sbjct: 241  RDGVVRRRVWRERSSVGNGSDENLNS---------------ETNSNLTEQGQVLEREAEL 285

Query: 423  SAPLIP----------QEMVQSESWPMDGIGLGSSGAIKLGLGDFIFYSVLVGRAAMYDF 274
            SAPLI           +     E+  ++GIGLGS+GAIKLGLGDFIFYSVLVGRAAMYDF
Sbjct: 286  SAPLIDRRTSVQLHGQENSASRENLLLEGIGLGSTGAIKLGLGDFIFYSVLVGRAAMYDF 345

Query: 273  MTVYACYLAIIAGLGITLMLLAFYQKALPALPVSILLGVVFYFLTRILLEIFVVQCSVNL 94
            MTVYACYLAIIAGLG+TLMLLAFYQKALPALPVSI LGV+FYFLTR+LLE+FVVQCS+NL
Sbjct: 346  MTVYACYLAIIAGLGVTLMLLAFYQKALPALPVSIALGVLFYFLTRLLLEVFVVQCSLNL 405

Query: 93   FMF 85
             MF
Sbjct: 406  VMF 408


>ref|XP_004137432.1| PREDICTED: presenilin-like protein At2g29900-like isoform 1 [Cucumis
            sativus]
          Length = 437

 Score =  454 bits (1169), Expect = e-125
 Identities = 254/437 (58%), Positives = 302/437 (69%), Gaps = 27/437 (6%)
 Frame = -3

Query: 1314 MSPNPKTTSILDSIGEEIVRIITPVSICMFLVVLLVTILN--TDXXXXXXXXXXXXAYNE 1141
            M+ N + TSIL+S+GEEIVRI+TPVSICMF+VV+LV+ILN  +             AYNE
Sbjct: 1    MAENQRPTSILESLGEEIVRIVTPVSICMFMVVILVSILNPNSSSSYASVGSIATIAYNE 60

Query: 1140 NTSDTFWDKLTGALLNSXXXXXXXXXXXXXXXXXFYIGCTKFLKYYMGFSSFVVLGFMGG 961
            ++SDT WDK  GALLNS                 FY+ C KFLKYYMGFS+FVVLGF+GG
Sbjct: 61   SSSDTSWDKFIGALLNSLVFVAVITLATFLMVLLFYLRCVKFLKYYMGFSAFVVLGFLGG 120

Query: 960  EIAVILVQKFSVPIDCVTFSVLLFNFAVVGVMSIFMSKMAILITQSYLVVIGMLVAYWFT 781
            EIA+ L+++FS+PIDC TF V LFNFA VGV+++FMSKMAIL+TQ YLV+IGMLVAYWFT
Sbjct: 121  EIALFLIEEFSIPIDCFTFLVALFNFAAVGVLAVFMSKMAILVTQGYLVLIGMLVAYWFT 180

Query: 780  LLPEWTTWALLVAMALYDXXXXXXXXXXXXXXXXLAISRDEEIPALVYEARPITNNNVGP 601
            LLPEWTTWALLVA+ALYD                LAISRDE+IPALVYEARP+ N++  P
Sbjct: 181  LLPEWTTWALLVALALYDLAAVLLPVGPLRLLVELAISRDEDIPALVYEARPVVNHDSNP 240

Query: 600  MQRVVER-RSWKGRRS-------ADPDTAESSNASSSLGVLLSSEDRQNE----TRVVIA 457
               V  R R W+ R         A PD+    N  S   V        N     +  V A
Sbjct: 241  RDLVQRRMRVWRERNETSDNRPIAVPDSVSDGNVVSESNVDEIETSNSNPIPIISTAVRA 300

Query: 456  QESQVS--GDSELSAPLI-------PQEMVQ----SESWPMDGIGLGSSGAIKLGLGDFI 316
            +E +V    ++EL  PLI       P  + +    +E+  ++GIGLGSSGAIKLGLGDFI
Sbjct: 301  EEGEVHPIRNTELLVPLIDNGGNVQPHGVAEASGSNENLMLEGIGLGSSGAIKLGLGDFI 360

Query: 315  FYSVLVGRAAMYDFMTVYACYLAIIAGLGITLMLLAFYQKALPALPVSILLGVVFYFLTR 136
            FYSVLVGRAAMYD+MTVYACYLAI+AGLGITLMLLA YQKALPALPVSI LG+VFYFLTR
Sbjct: 361  FYSVLVGRAAMYDYMTVYACYLAIVAGLGITLMLLAIYQKALPALPVSIALGIVFYFLTR 420

Query: 135  ILLEIFVVQCSVNLFMF 85
            + LE+FVVQCS+NL MF
Sbjct: 421  LFLEVFVVQCSLNLLMF 437


>ref|XP_004137433.1| PREDICTED: presenilin-like protein At2g29900-like isoform 2 [Cucumis
            sativus]
          Length = 417

 Score =  453 bits (1166), Expect = e-125
 Identities = 244/418 (58%), Positives = 298/418 (71%), Gaps = 8/418 (1%)
 Frame = -3

Query: 1314 MSPNPKTTSILDSIGEEIVRIITPVSICMFLVVLLVTILN--TDXXXXXXXXXXXXAYNE 1141
            M+ N + TSIL+S+GEEIVRI+TPVSICMF+VV+LV+ILN  +             AYNE
Sbjct: 1    MAENQRPTSILESLGEEIVRIVTPVSICMFMVVILVSILNPNSSSSYASVGSIATIAYNE 60

Query: 1140 NTSDTFWDKLTGALLNSXXXXXXXXXXXXXXXXXFYIGCTKFLKYYMGFSSFVVLGFMGG 961
            ++SDT WDK  GALLNS                 FY+ C KFLKYYMGFS+FVVLGF+GG
Sbjct: 61   SSSDTSWDKFIGALLNSLVFVAVITLATFLMVLLFYLRCVKFLKYYMGFSAFVVLGFLGG 120

Query: 960  EIAVILVQKFSVPIDCVTFSVLLFNFAVVGVMSIFMSKMAILITQSYLVVIGMLVAYWFT 781
            EIA+ L+++FS+PIDC TF V LFNFA VGV+++FMSKMAIL+TQ YLV+IGMLVAYWFT
Sbjct: 121  EIALFLIEEFSIPIDCFTFLVALFNFAAVGVLAVFMSKMAILVTQGYLVLIGMLVAYWFT 180

Query: 780  LLPEWTTWALLVAMALYDXXXXXXXXXXXXXXXXLAISRDEEIPALVYEARPITNNNVGP 601
            LLPEWTTWALLVA+ALYD                LAISRDE+IPALVYEARP+ N++  P
Sbjct: 181  LLPEWTTWALLVALALYDLAAVLLPVGPLRLLVELAISRDEDIPALVYEARPVVNHDSNP 240

Query: 600  MQRVVER-RSWKGRRSADPDTAESSNASSSLGVLLSSEDRQNETRVVIAQESQ-----VS 439
               V  R R W+  R+   D  E   ++S+   ++S+  R  E  V   + ++     + 
Sbjct: 241  RDLVQRRMRVWR-ERNETSDNHEIETSNSNPIPIISTAVRAEEGEVHPIRNTELLVPLID 299

Query: 438  GDSELSAPLIPQEMVQSESWPMDGIGLGSSGAIKLGLGDFIFYSVLVGRAAMYDFMTVYA 259
                +    + +    +E+  ++GIGLGSSGAIKLGLGDFIFYSVLVGRAAMYD+MTVYA
Sbjct: 300  NGGNVQPHGVAEASGSNENLMLEGIGLGSSGAIKLGLGDFIFYSVLVGRAAMYDYMTVYA 359

Query: 258  CYLAIIAGLGITLMLLAFYQKALPALPVSILLGVVFYFLTRILLEIFVVQCSVNLFMF 85
            CYLAI+AGLGITLMLLA YQKALPALPVSI LG+VFYFLTR+ LE+FVVQCS+NL MF
Sbjct: 360  CYLAIVAGLGITLMLLAIYQKALPALPVSIALGIVFYFLTRLFLEVFVVQCSLNLLMF 417


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