BLASTX nr result
ID: Coptis24_contig00010389
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00010389 (2516 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI22283.3| unnamed protein product [Vitis vinifera] 602 e-169 ref|XP_002279015.1| PREDICTED: pentatricopeptide repeat-containi... 602 e-169 ref|XP_002323888.1| predicted protein [Populus trichocarpa] gi|2... 558 e-156 ref|XP_004169658.1| PREDICTED: pentatricopeptide repeat-containi... 545 e-152 ref|XP_004141597.1| PREDICTED: pentatricopeptide repeat-containi... 545 e-152 >emb|CBI22283.3| unnamed protein product [Vitis vinifera] Length = 626 Score = 602 bits (1553), Expect = e-169 Identities = 322/587 (54%), Positives = 411/587 (70%), Gaps = 22/587 (3%) Frame = +3 Query: 363 CPC-PRCFHH------------GHSISYV----NGKTKRN--SGILVGQNNIGGQFVYRS 485 C C PRC + GH + + NG+++ I++ N + G + Sbjct: 35 CSCFPRCLCYNSTIKTNKKQLKGHGVDTISLRENGRSQFEVTGHIMMEMNLLFGSERRDT 94 Query: 486 ARIKVNMVMVAGLXXXXXXXXXXGDIIILERKGEAVGLSYEQKLPPRGNAVNEEGIGFEV 665 RI NMV A + +++ RK E +EQK PP GN+ + FE Sbjct: 95 PRIVSNMV--ACVQSGLVCEEDEENMLNQRRKEEFDPSYFEQKFPPLGNSEIHKNPDFEH 152 Query: 666 NG-AEPISDYVSLVCEVETSLHFLEERDEEILSQRILGLSRSNKVRSALELHKSMEASGL 842 G AEP++ + E E LHFLEER+E+ILS+RIL LSRSNKVRS LEL+++ME SGL Sbjct: 153 IGVAEPLTISTGISSEFEDKLHFLEERNEQILSKRILMLSRSNKVRSVLELYRTMEFSGL 212 Query: 843 QPNAHXXXXXXXXXXRNGFLNDALKIFEAMK-KEVTSGHTYSLILKAVASTQGYDSALKL 1019 QP++H RN L+DAL++FE+MK E T+GH+YSL+LKA+A+ QGYDSALK+ Sbjct: 213 QPSSHACNSLLSCLLRNEMLDDALRVFESMKANESTTGHSYSLVLKAIANIQGYDSALKM 272 Query: 1020 FIKLEGE-GAENVFDAITYNTMLSICSKENNWLQAERVWKKLKENGHKATTVTYRLLVCT 1196 F KLE E + FD I Y TM+SIC K NNW Q ER+W+ +KENG T VTYRLLV Sbjct: 273 FSKLEVECKVKKDFDVIAYTTMISICGKVNNWAQTERIWRSMKENGLVGTIVTYRLLVSV 332 Query: 1197 FARCGQAELAFDAYSEMVRNKLEPSEDMMQAMISTCTKEEKWGLAHNIFQTMLKSGLYPN 1376 F RCGQ ELA DAYSEM++N L+P ED M+A+I C KE KW LA ++FQ+ML GL PN Sbjct: 333 FVRCGQNELAIDAYSEMIQNGLKPGEDAMKAIIGACAKEGKWDLALSVFQSMLNVGLKPN 392 Query: 1377 IVAYNSLINSLGKAGEVELAFNVFGLMKLSGHTPDAYTWNALLGALNRGNRYMDALWLFG 1556 ++A N+LINS+GK+G V+LAF V+ +MK GHTPD YTWNALLGAL R N++ DAL LF Sbjct: 393 LIACNALINSIGKSGNVKLAFRVYDVMKSLGHTPDVYTWNALLGALYRANQHADALHLFE 452 Query: 1557 SIKRKKSTLLNFHLYNTALMSCQRLGFWERSLQILWQMEASGLPVSVESYNLVVSACEAA 1736 SI R++S+ +N HLYNTALMSCQ+LG W R+LQ+LWQMEASGL VS SYNLV+ ACE A Sbjct: 453 SI-REQSSQVNLHLYNTALMSCQKLGLWNRALQLLWQMEASGLSVSSASYNLVIGACEVA 511 Query: 1737 RKPKVALQVYEQMVHKKCTPDTFTYLSLIRACVWGSLWSELQEILNHVPGDVSLYNAAIH 1916 RKP++ALQVYE MV ++CTPDTFT+LSLIR+C+WGSLW+E++EILN DVSLYNAAI Sbjct: 512 RKPEIALQVYEHMVQQQCTPDTFTHLSLIRSCIWGSLWAEVKEILNRAGTDVSLYNAAIQ 571 Query: 1917 GMCLRGQTASAQKMYKKMREGGLKPDGKTRALMIQNLKSNSSRQKSR 2057 GMCLRG+ SA+K+Y +MR+ GLKPDGKTRALM+QNL+ ++ R +R Sbjct: 572 GMCLRGKIESAKKLYMRMRKSGLKPDGKTRALMLQNLQKDAIRPSNR 618 >ref|XP_002279015.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29290-like [Vitis vinifera] Length = 546 Score = 602 bits (1551), Expect = e-169 Identities = 304/497 (61%), Positives = 379/497 (76%), Gaps = 3/497 (0%) Frame = +3 Query: 576 RKGEAVGLSYEQKLPPRGNAVNEEGIGFEVNG-AEPISDYVSLVCEVETSLHFLEERDEE 752 RK E +EQK PP GN+ + FE G AEP++ + E E LHFLEER+E+ Sbjct: 43 RKEEFDPSYFEQKFPPLGNSEIHKNPDFEHIGVAEPLTISTGISSEFEDKLHFLEERNEQ 102 Query: 753 ILSQRILGLSRSNKVRSALELHKSMEASGLQPNAHXXXXXXXXXXRNGFLNDALKIFEAM 932 ILS+RIL LSRSNKVRS LEL+++ME SGLQP++H RN L+DAL++FE+M Sbjct: 103 ILSKRILMLSRSNKVRSVLELYRTMEFSGLQPSSHACNSLLSCLLRNEMLDDALRVFESM 162 Query: 933 K-KEVTSGHTYSLILKAVASTQGYDSALKLFIKLEGE-GAENVFDAITYNTMLSICSKEN 1106 K E T+GH+YSL+LKA+A+ QGYDSALK+F KLE E + FD I Y TM+SIC K N Sbjct: 163 KANESTTGHSYSLVLKAIANIQGYDSALKMFSKLEVECKVKKDFDVIAYTTMISICGKVN 222 Query: 1107 NWLQAERVWKKLKENGHKATTVTYRLLVCTFARCGQAELAFDAYSEMVRNKLEPSEDMMQ 1286 NW Q ER+W+ +KENG T VTYRLLV F RCGQ ELA DAYSEM++N L+P ED M+ Sbjct: 223 NWAQTERIWRSMKENGLVGTIVTYRLLVSVFVRCGQNELAIDAYSEMIQNGLKPGEDAMK 282 Query: 1287 AMISTCTKEEKWGLAHNIFQTMLKSGLYPNIVAYNSLINSLGKAGEVELAFNVFGLMKLS 1466 A+I C KE KW LA ++FQ+ML GL PN++A N+LINS+GK+G V+LAF V+ +MK Sbjct: 283 AIIGACAKEGKWDLALSVFQSMLNVGLKPNLIACNALINSIGKSGNVKLAFRVYDVMKSL 342 Query: 1467 GHTPDAYTWNALLGALNRGNRYMDALWLFGSIKRKKSTLLNFHLYNTALMSCQRLGFWER 1646 GHTPD YTWNALLGAL R N++ DAL LF SI R++S+ +N HLYNTALMSCQ+LG W R Sbjct: 343 GHTPDVYTWNALLGALYRANQHADALHLFESI-REQSSQVNLHLYNTALMSCQKLGLWNR 401 Query: 1647 SLQILWQMEASGLPVSVESYNLVVSACEAARKPKVALQVYEQMVHKKCTPDTFTYLSLIR 1826 +LQ+LWQMEASGL VS SYNLV+ ACE ARKP++ALQVYE MV ++CTPDTFT+LSLIR Sbjct: 402 ALQLLWQMEASGLSVSSASYNLVIGACEVARKPEIALQVYEHMVQQQCTPDTFTHLSLIR 461 Query: 1827 ACVWGSLWSELQEILNHVPGDVSLYNAAIHGMCLRGQTASAQKMYKKMREGGLKPDGKTR 2006 +C+WGSLW+E++EILN DVSLYNAAI GMCLRG+ SA+K+Y +MR+ GLKPDGKTR Sbjct: 462 SCIWGSLWAEVKEILNRAGTDVSLYNAAIQGMCLRGKIESAKKLYMRMRKSGLKPDGKTR 521 Query: 2007 ALMIQNLKSNSSRQKSR 2057 ALM+QNL+ ++ R +R Sbjct: 522 ALMLQNLQKDAIRPSNR 538 >ref|XP_002323888.1| predicted protein [Populus trichocarpa] gi|222866890|gb|EEF04021.1| predicted protein [Populus trichocarpa] Length = 487 Score = 558 bits (1437), Expect = e-156 Identities = 277/451 (61%), Positives = 346/451 (76%), Gaps = 2/451 (0%) Frame = +3 Query: 714 ETSLHFLEERDEEILSQRILGLSRSNKVRSALELHKSMEASGLQPNAHXXXXXXXXXXRN 893 E+ +HFLEE DE LS+RIL LSRSNK+RSAL+L +SME SGLQPN H R+ Sbjct: 36 ESRVHFLEETDENELSRRILMLSRSNKIRSALQLLRSMEFSGLQPNTHACNSLLSCLIRH 95 Query: 894 GFLNDALKIFEAMKK-EVTSGHTYSLILKAVASTQGYDSALKLFIKLEGEGAENV-FDAI 1067 DAL++FE MKK E+T+GH YSLILKAVAST+G DSAL +F +LE E FD I Sbjct: 96 ELHEDALRVFEYMKKNEITTGHAYSLILKAVASTKGCDSALDMFTELEAFSREKKDFDVI 155 Query: 1068 TYNTMLSICSKENNWLQAERVWKKLKENGHKATTVTYRLLVCTFARCGQAELAFDAYSEM 1247 YNTM+S+C KE NW++ ER+W+ +KEN + T VTY LLV F RCG+ ELA +AYSEM Sbjct: 156 VYNTMISVCGKEKNWVETERIWRSMKENDYHGTQVTYSLLVSIFVRCGRNELALEAYSEM 215 Query: 1248 VRNKLEPSEDMMQAMISTCTKEEKWGLAHNIFQTMLKSGLYPNIVAYNSLINSLGKAGEV 1427 V+N L+P ED + A+I C+K+ W LA NIFQ ML GL PN++A N+LIN LGKAGE+ Sbjct: 216 VQNGLKPREDTLHAVIGACSKKGNWDLALNIFQNMLDHGLKPNLIACNALINLLGKAGEI 275 Query: 1428 ELAFNVFGLMKLSGHTPDAYTWNALLGALNRGNRYMDALWLFGSIKRKKSTLLNFHLYNT 1607 +LAF VF ++K GHTPD YTWNALL L R N+++DAL LF +KR++++LLN HLYNT Sbjct: 276 KLAFKVFKILKSLGHTPDEYTWNALLSGLYRANQHVDALQLFERLKREQNSLLNEHLYNT 335 Query: 1608 ALMSCQRLGFWERSLQILWQMEASGLPVSVESYNLVVSACEAARKPKVALQVYEQMVHKK 1787 ALMSCQ+LG W+R+LQ++WQ EASGL VS SYNL + ACE ARKP+VAL+VYE MVH+K Sbjct: 336 ALMSCQKLGLWDRALQLVWQAEASGLSVSTASYNLAIGACEVARKPEVALEVYEHMVHQK 395 Query: 1788 CTPDTFTYLSLIRACVWGSLWSELQEILNHVPGDVSLYNAAIHGMCLRGQTASAQKMYKK 1967 C PDTFTYLSLIR+C+W SLW E++EIL+ V DVSLYNA IHGMCLRG+T SA+K+Y K Sbjct: 396 CPPDTFTYLSLIRSCIWASLWDEVEEILDQVAPDVSLYNAVIHGMCLRGKTESAKKLYMK 455 Query: 1968 MREGGLKPDGKTRALMIQNLKSNSSRQKSRY 2060 M + GLKPDG ALM+QNL+ NS++ +SR+ Sbjct: 456 MGKSGLKPDG---ALMLQNLRKNSTK-RSRF 482 >ref|XP_004169658.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29290-like [Cucumis sativus] Length = 600 Score = 545 bits (1403), Expect = e-152 Identities = 272/490 (55%), Positives = 353/490 (72%), Gaps = 1/490 (0%) Frame = +3 Query: 600 SYEQKLPPRGNAVNEEGIGFEVNGAEPISDYVSLVCEVETSLHFLEERDEEILSQRILGL 779 S E KLPP G+ +++ F+ V E E+ LHFLEE D+ +LS+RIL L Sbjct: 100 SREWKLPPWGDIAHQDEATFQSEDVNQPKILEGKVLENESKLHFLEETDKVMLSKRILIL 159 Query: 780 SRSNKVRSALELHKSMEASGLQPNAHXXXXXXXXXXRNGFLNDALKIFEAMK-KEVTSGH 956 SR NKVRSALEL +SM+ +GL P+ H RN D L+IFE MK E+++GH Sbjct: 160 SRKNKVRSALELLRSMQLAGLLPSLHALNSLLACLLRNELFADGLRIFEFMKLNELSTGH 219 Query: 957 TYSLILKAVASTQGYDSALKLFIKLEGEGAENVFDAITYNTMLSICSKENNWLQAERVWK 1136 TYSL+LKAVA+ G+ SAL++F E + FDAI YNTM+SIC K+NNW++AER W+ Sbjct: 220 TYSLVLKAVANAHGFLSALEMFKAWEHQCVLAQFDAIVYNTMISICGKDNNWVEAERTWR 279 Query: 1137 KLKENGHKATTVTYRLLVCTFARCGQAELAFDAYSEMVRNKLEPSEDMMQAMISTCTKEE 1316 +++NG AT +TY LLV TF RC Q ELA D Y +MV+N +P D MQA+I +KE Sbjct: 280 LMEKNGCGATRITYSLLVSTFVRCNQNELAIDTYVKMVQNSFKPGNDTMQAIIGASSKEG 339 Query: 1317 KWGLAHNIFQTMLKSGLYPNIVAYNSLINSLGKAGEVELAFNVFGLMKLSGHTPDAYTWN 1496 KW A +FQ MLK GL PN V++N+LIN+LGKA EV LAF+V+ +MK GH+PD YTWN Sbjct: 340 KWDFALRVFQDMLKCGLQPNSVSFNALINALGKAKEVTLAFSVYNVMKSMGHSPDVYTWN 399 Query: 1497 ALLGALNRGNRYMDALWLFGSIKRKKSTLLNFHLYNTALMSCQRLGFWERSLQILWQMEA 1676 ALLGAL + NRY DA+ LF +KR+K LN H+YNT LMSC +LG WER++QILW+ME Sbjct: 400 ALLGALYKANRYSDAIHLFEFVKREK-VQLNIHIYNTILMSCSKLGLWERAVQILWEMEV 458 Query: 1677 SGLPVSVESYNLVVSACEAARKPKVALQVYEQMVHKKCTPDTFTYLSLIRACVWGSLWSE 1856 SGL +S SYN+V++ACE ARKP++ALQVYE+MVH+K TPDTFT+LSLIR C+WGSLW E Sbjct: 459 SGLSISTSSYNIVMTACEMARKPEIALQVYERMVHQKLTPDTFTHLSLIRCCIWGSLWDE 518 Query: 1857 LQEILNHVPGDVSLYNAAIHGMCLRGQTASAQKMYKKMREGGLKPDGKTRALMIQNLKSN 2036 ++ +LN DVS+YN I GMCLRG++ A+K+Y KMRE G++PDGKTRALM+QNL + Sbjct: 519 VELLLNKSAPDVSVYNVVIQGMCLRGKSDLAKKLYTKMRENGIQPDGKTRALMLQNLPKD 578 Query: 2037 SSRQKSRYPS 2066 +R+K+R+ S Sbjct: 579 PARRKNRWAS 588 Score = 81.6 bits (200), Expect = 9e-13 Identities = 68/274 (24%), Positives = 121/274 (44%), Gaps = 3/274 (1%) Frame = +3 Query: 762 QRILGLS-RSNKVRSALELHKSMEASGLQPNAHXXXXXXXXXXRNGFLNDALKIFEAMKK 938 Q I+G S + K AL + + M GLQPN+ + + A ++ MK Sbjct: 329 QAIIGASSKEGKWDFALRVFQDMLKCGLQPNSVSFNALINALGKAKEVTLAFSVYNVMKS 388 Query: 939 EVTSG--HTYSLILKAVASTQGYDSALKLFIKLEGEGAENVFDAITYNTMLSICSKENNW 1112 S +T++ +L A+ Y A+ LF ++ E + + YNT+L CSK W Sbjct: 389 MGHSPDVYTWNALLGALYKANRYSDAIHLFEFVKREKVQ--LNIHIYNTILMSCSKLGLW 446 Query: 1113 LQAERVWKKLKENGHKATTVTYRLLVCTFARCGQAELAFDAYSEMVRNKLEPSEDMMQAM 1292 +A ++ +++ +G +T +Y +++ + E+A Y MV KL P ++ Sbjct: 447 ERAVQILWEMEVSGLSISTSSYNIVMTACEMARKPEIALQVYERMVHQKLTPDTFTHLSL 506 Query: 1293 ISTCTKEEKWGLAHNIFQTMLKSGLYPNIVAYNSLINSLGKAGEVELAFNVFGLMKLSGH 1472 I C WG + + +L P++ YN +I + G+ +LA ++ M+ +G Sbjct: 507 IRCCI----WGSLWDEVELLLNKSA-PDVSVYNVVIQGMCLRGKSDLAKKLYTKMRENGI 561 Query: 1473 TPDAYTWNALLGALNRGNRYMDALWLFGSIKRKK 1574 PD T +L L + W G KR++ Sbjct: 562 QPDGKTRALMLQNLPKDPARRKNRWASGFKKRQR 595 >ref|XP_004141597.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29290-like [Cucumis sativus] Length = 600 Score = 545 bits (1403), Expect = e-152 Identities = 272/490 (55%), Positives = 353/490 (72%), Gaps = 1/490 (0%) Frame = +3 Query: 600 SYEQKLPPRGNAVNEEGIGFEVNGAEPISDYVSLVCEVETSLHFLEERDEEILSQRILGL 779 S E KLPP G+ +++ F+ V E E+ LHFLEE D+ +LS+RIL L Sbjct: 100 SREWKLPPWGDIAHQDEATFQSEDVNQPKILEGKVLENESKLHFLEETDKVMLSKRILIL 159 Query: 780 SRSNKVRSALELHKSMEASGLQPNAHXXXXXXXXXXRNGFLNDALKIFEAMK-KEVTSGH 956 SR NKVRSALEL +SM+ +GL P+ H RN D L+IFE MK E+++GH Sbjct: 160 SRKNKVRSALELLRSMQLAGLLPSLHALNSLLACLLRNELFADGLRIFEFMKLNELSTGH 219 Query: 957 TYSLILKAVASTQGYDSALKLFIKLEGEGAENVFDAITYNTMLSICSKENNWLQAERVWK 1136 TYSL+LKAVA+ G+ SAL++F E + FDAI YNTM+SIC K+NNW++AER W+ Sbjct: 220 TYSLVLKAVANAHGFLSALEMFKAWEHQCVLAQFDAIVYNTMISICGKDNNWVEAERTWR 279 Query: 1137 KLKENGHKATTVTYRLLVCTFARCGQAELAFDAYSEMVRNKLEPSEDMMQAMISTCTKEE 1316 +++NG AT +TY LLV TF RC Q ELA D Y +MV+N +P D MQA+I +KE Sbjct: 280 LMEKNGCSATRITYSLLVSTFVRCNQNELAIDTYVKMVQNSFKPGNDTMQAIIGASSKEG 339 Query: 1317 KWGLAHNIFQTMLKSGLYPNIVAYNSLINSLGKAGEVELAFNVFGLMKLSGHTPDAYTWN 1496 KW A +FQ MLK GL PN V++N+LIN+LGKA EV LAF+V+ +MK GH+PD YTWN Sbjct: 340 KWDFALRVFQDMLKCGLQPNSVSFNALINALGKAKEVTLAFSVYNVMKSMGHSPDVYTWN 399 Query: 1497 ALLGALNRGNRYMDALWLFGSIKRKKSTLLNFHLYNTALMSCQRLGFWERSLQILWQMEA 1676 ALLGAL + NRY DA+ LF +KR+K LN H+YNT LMSC +LG WER++QILW+ME Sbjct: 400 ALLGALYKANRYSDAIHLFEFVKREK-VQLNIHIYNTILMSCSKLGLWERAVQILWEMEV 458 Query: 1677 SGLPVSVESYNLVVSACEAARKPKVALQVYEQMVHKKCTPDTFTYLSLIRACVWGSLWSE 1856 SGL +S SYN+V++ACE ARKP++ALQVYE+MVH+K TPDTFT+LSLIR C+WGSLW E Sbjct: 459 SGLSISTSSYNIVMTACEMARKPEIALQVYERMVHQKHTPDTFTHLSLIRCCIWGSLWDE 518 Query: 1857 LQEILNHVPGDVSLYNAAIHGMCLRGQTASAQKMYKKMREGGLKPDGKTRALMIQNLKSN 2036 ++ +LN DVS+YN I GMCLRG++ A+K+Y KMRE G++PDGKTRALM+QNL + Sbjct: 519 VELLLNKSAPDVSVYNVVIQGMCLRGKSDLAKKLYTKMRENGIQPDGKTRALMLQNLPKD 578 Query: 2037 SSRQKSRYPS 2066 +R+K+R+ S Sbjct: 579 PARRKNRWAS 588 Score = 79.0 bits (193), Expect = 6e-12 Identities = 67/274 (24%), Positives = 120/274 (43%), Gaps = 3/274 (1%) Frame = +3 Query: 762 QRILGLS-RSNKVRSALELHKSMEASGLQPNAHXXXXXXXXXXRNGFLNDALKIFEAMKK 938 Q I+G S + K AL + + M GLQPN+ + + A ++ MK Sbjct: 329 QAIIGASSKEGKWDFALRVFQDMLKCGLQPNSVSFNALINALGKAKEVTLAFSVYNVMKS 388 Query: 939 EVTSG--HTYSLILKAVASTQGYDSALKLFIKLEGEGAENVFDAITYNTMLSICSKENNW 1112 S +T++ +L A+ Y A+ LF ++ E + + YNT+L CSK W Sbjct: 389 MGHSPDVYTWNALLGALYKANRYSDAIHLFEFVKREKVQ--LNIHIYNTILMSCSKLGLW 446 Query: 1113 LQAERVWKKLKENGHKATTVTYRLLVCTFARCGQAELAFDAYSEMVRNKLEPSEDMMQAM 1292 +A ++ +++ +G +T +Y +++ + E+A Y MV K P ++ Sbjct: 447 ERAVQILWEMEVSGLSISTSSYNIVMTACEMARKPEIALQVYERMVHQKHTPDTFTHLSL 506 Query: 1293 ISTCTKEEKWGLAHNIFQTMLKSGLYPNIVAYNSLINSLGKAGEVELAFNVFGLMKLSGH 1472 I C WG + + +L P++ YN +I + G+ +LA ++ M+ +G Sbjct: 507 IRCCI----WGSLWDEVELLLNKSA-PDVSVYNVVIQGMCLRGKSDLAKKLYTKMRENGI 561 Query: 1473 TPDAYTWNALLGALNRGNRYMDALWLFGSIKRKK 1574 PD T +L L + W G KR++ Sbjct: 562 QPDGKTRALMLQNLPKDPARRKNRWASGFKKRQR 595