BLASTX nr result
ID: Coptis24_contig00010379
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00010379 (553 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI16457.3| unnamed protein product [Vitis vinifera] 239 3e-61 ref|XP_002283306.1| PREDICTED: putative E3 ubiquitin-protein lig... 239 3e-61 emb|CAN71223.1| hypothetical protein VITISV_011730 [Vitis vinifera] 239 3e-61 ref|XP_002304021.1| predicted protein [Populus trichocarpa] gi|2... 209 2e-52 gb|ACJ02343.1| U-box domain-containing protein [Helianthus annuus] 208 5e-52 >emb|CBI16457.3| unnamed protein product [Vitis vinifera] Length = 1084 Score = 239 bits (609), Expect = 3e-61 Identities = 117/184 (63%), Positives = 144/184 (78%) Frame = -2 Query: 552 EWFDKGKRTCPITGKNLESLGLPITNFVLKRVIDRWKSEHCGNLLAFASKMQGTSSEHGF 373 EWF++G R CP+TGK LE LG+P+TNF+LKRVID WKSE+C +LLAFASK++G+S EHG Sbjct: 640 EWFNQGNRNCPVTGKALEGLGVPLTNFILKRVIDGWKSENCRHLLAFASKVEGSSGEHGV 699 Query: 372 KSKDQRAVLILEKLLVGFRTEDRLTNAKHLISLGGLQFLILRFELGNLEEKSRILVLLSC 193 + KD+ A+ LE+ L G E++LTNAKHLISLGGLQFL RFELGNLEEK+ + L+ Sbjct: 700 EPKDETAIYALEQFLSGSSKEEKLTNAKHLISLGGLQFLTRRFELGNLEEKTCVAALMCS 759 Query: 192 CIEADGDCRNYIAKNINKTCLLELLHNKQVKSRGNAVMLLMELICLCRRTEITSFLSSMQ 13 CIEAD C+N IAK I K CLLELLH+KQ KSR NAV+LL ELIC+ R ++T FLSS Q Sbjct: 760 CIEADYRCKNEIAKYIKKPCLLELLHSKQAKSRTNAVLLLTELICMHRWKDVTLFLSSFQ 819 Query: 12 KDEI 1 + I Sbjct: 820 NEGI 823 >ref|XP_002283306.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis vinifera] Length = 1148 Score = 239 bits (609), Expect = 3e-61 Identities = 117/184 (63%), Positives = 144/184 (78%) Frame = -2 Query: 552 EWFDKGKRTCPITGKNLESLGLPITNFVLKRVIDRWKSEHCGNLLAFASKMQGTSSEHGF 373 EWF++G R CP+TGK LE LG+P+TNF+LKRVID WKSE+C +LLAFASK++G+S EHG Sbjct: 704 EWFNQGNRNCPVTGKALEGLGVPLTNFILKRVIDGWKSENCRHLLAFASKVEGSSGEHGV 763 Query: 372 KSKDQRAVLILEKLLVGFRTEDRLTNAKHLISLGGLQFLILRFELGNLEEKSRILVLLSC 193 + KD+ A+ LE+ L G E++LTNAKHLISLGGLQFL RFELGNLEEK+ + L+ Sbjct: 764 EPKDETAIYALEQFLSGSSKEEKLTNAKHLISLGGLQFLTRRFELGNLEEKTCVAALMCS 823 Query: 192 CIEADGDCRNYIAKNINKTCLLELLHNKQVKSRGNAVMLLMELICLCRRTEITSFLSSMQ 13 CIEAD C+N IAK I K CLLELLH+KQ KSR NAV+LL ELIC+ R ++T FLSS Q Sbjct: 824 CIEADYRCKNEIAKYIKKPCLLELLHSKQAKSRTNAVLLLTELICMHRWKDVTLFLSSFQ 883 Query: 12 KDEI 1 + I Sbjct: 884 NEGI 887 >emb|CAN71223.1| hypothetical protein VITISV_011730 [Vitis vinifera] Length = 1148 Score = 239 bits (609), Expect = 3e-61 Identities = 117/184 (63%), Positives = 144/184 (78%) Frame = -2 Query: 552 EWFDKGKRTCPITGKNLESLGLPITNFVLKRVIDRWKSEHCGNLLAFASKMQGTSSEHGF 373 EWF++G R CP+TGK LE LG+P+TNF+LKRVID WKSE+C +LLAFASK++G+S EHG Sbjct: 704 EWFNQGNRNCPVTGKALEGLGVPLTNFILKRVIDGWKSENCRHLLAFASKVEGSSGEHGV 763 Query: 372 KSKDQRAVLILEKLLVGFRTEDRLTNAKHLISLGGLQFLILRFELGNLEEKSRILVLLSC 193 + KD+ A+ LE+ L G E++LTNAKHLISLGGLQFL RFELGNLEEK+ + L+ Sbjct: 764 EPKDETAIYALEQFLSGSSKEEKLTNAKHLISLGGLQFLTRRFELGNLEEKTCVAALMCS 823 Query: 192 CIEADGDCRNYIAKNINKTCLLELLHNKQVKSRGNAVMLLMELICLCRRTEITSFLSSMQ 13 CIEAD C+N IAK I K CLLELLH+KQ KSR NAV+LL ELIC+ R ++T FLSS Q Sbjct: 824 CIEADYRCKNEIAKYIKKPCLLELLHSKQAKSRTNAVLLLTELICMHRWKDVTLFLSSFQ 883 Query: 12 KDEI 1 + I Sbjct: 884 NEGI 887 >ref|XP_002304021.1| predicted protein [Populus trichocarpa] gi|222841453|gb|EEE79000.1| predicted protein [Populus trichocarpa] Length = 1159 Score = 209 bits (532), Expect = 2e-52 Identities = 101/184 (54%), Positives = 133/184 (72%) Frame = -2 Query: 552 EWFDKGKRTCPITGKNLESLGLPITNFVLKRVIDRWKSEHCGNLLAFASKMQGTSSEHGF 373 +WF++G RTCP+TGK LE +P+TNF+LKR+ID WK E C +LL+FAS++ S + Sbjct: 719 KWFNQGNRTCPLTGKTLECPTIPLTNFILKRMIDSWKLERCNHLLSFASQIFKNSEAYDS 778 Query: 372 KSKDQRAVLILEKLLVGFRTEDRLTNAKHLISLGGLQFLILRFELGNLEEKSRILVLLSC 193 + +++ A+ ILEKLL E+RLTNAKHLISLG L+FLI RFE G+LEEK+ + LLSC Sbjct: 779 RQRNEDALFILEKLLASSSREERLTNAKHLISLGVLEFLIKRFEFGSLEEKTLVAALLSC 838 Query: 192 CIEADGDCRNYIAKNINKTCLLELLHNKQVKSRGNAVMLLMELICLCRRTEITSFLSSMQ 13 CIEA+ CRN+IA I+K CL ELLH Q KS N V LL+EL+CL RR +T F+S + Sbjct: 839 CIEAESSCRNHIAIKIDKQCLFELLHGNQSKSARNVVGLLIELVCLSRRKGVTQFISGLP 898 Query: 12 KDEI 1 + I Sbjct: 899 SETI 902 >gb|ACJ02343.1| U-box domain-containing protein [Helianthus annuus] Length = 1050 Score = 208 bits (529), Expect = 5e-52 Identities = 102/184 (55%), Positives = 135/184 (73%) Frame = -2 Query: 552 EWFDKGKRTCPITGKNLESLGLPITNFVLKRVIDRWKSEHCGNLLAFASKMQGTSSEHGF 373 EWF KG +TCP+TGK LE +P TN +LKR+ID WKS+H +L+ AS+ G+ EH + Sbjct: 657 EWFSKGNKTCPVTGKTLEYQTVPFTNSILKRLIDSWKSKHSREMLSSASRPMGSPREHEY 716 Query: 372 KSKDQRAVLILEKLLVGFRTEDRLTNAKHLISLGGLQFLILRFELGNLEEKSRILVLLSC 193 K+ + AV ILE+LL F E+ NAKHL++LGGLQFLI RF+ GNL+EK+R+ LLS Sbjct: 717 KA--EAAVFILEQLLTVFGREENTANAKHLLALGGLQFLIQRFQYGNLDEKTRVAALLSM 774 Query: 192 CIEADGDCRNYIAKNINKTCLLELLHNKQVKSRGNAVMLLMELICLCRRTEITSFLSSMQ 13 CIEAD CRN++A+ ++K +LELLH K+VKSR NAV LL +LICL RR ++ FLS +Q Sbjct: 775 CIEADSSCRNHVARYVDKEGVLELLHCKEVKSRSNAVFLLFDLICLNRRKDVRFFLSGLQ 834 Query: 12 KDEI 1 K+ I Sbjct: 835 KEVI 838