BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010378
         (2034 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280127.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransf...   573   e-161
ref|XP_003549460.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransf...   545   e-152
ref|XP_003589467.1| tRNA (adenine-N(1)-)-methyltransferase non-c...   540   e-151
tpg|DAA56013.1| TPA: hypothetical protein ZEAMMB73_887805 [Zea m...   469   e-129
ref|XP_003580561.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransf...   465   e-128

>ref|XP_002280127.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransferase non-catalytic
            subunit trm6 [Vitis vinifera]
            gi|302142647|emb|CBI19850.3| unnamed protein product
            [Vitis vinifera]
          Length = 464

 Score =  573 bits (1477), Expect = e-161
 Identities = 296/472 (62%), Positives = 347/472 (73%), Gaps = 2/472 (0%)
 Frame = +3

Query: 225  RITWEGCSVLLDINDGDRLVFARLSNSSTLKIGDKKCSLGPLIGCPFGSTFQLDSTGSSA 404
            R+TWEGCSVLLDINDGDRLVFARLS S+TLKIG+K CSL PLIGCPFGS FQ+D+ G   
Sbjct: 15   RVTWEGCSVLLDINDGDRLVFARLSASATLKIGNKNCSLQPLIGCPFGSLFQVDN-GPRG 73

Query: 405  PYLSRIL--VENNNQGDIDVVEGKNEVEIKEESRDNRALVDNNSAQSLSGQDIDALRRQG 578
            PYLSR+    E N+      ++   + ++K+E +DNRA+VDNN AQSL+G+DID +RRQG
Sbjct: 74   PYLSRVTPSAEGND------LQETQDCQLKDEPKDNRAIVDNNKAQSLTGEDIDEMRRQG 127

Query: 579  ATGDQIVEALIANSSTFEKKTLFSQEKYRIRKQKKYAPRVLLRRPFARSICEAYFKKYPA 758
            ATGD+IVEALI+NS+T+EKKT FSQEKYR++KQKKY+PRVLLRRPF RSICEAYFKKYPA
Sbjct: 128  ATGDEIVEALISNSATYEKKTSFSQEKYRLKKQKKYSPRVLLRRPFCRSICEAYFKKYPA 187

Query: 759  RIGYLRMDTLSLLLSMANVSPYSDVLVVDMVGGILTGAVAERLGGTGYVCNTYFGVTQYP 938
            RIG+LR+DTLSLLLSMAN++ +SDVLVVDMVGG+LTGAVAERLGGTGYVCN Y G T YP
Sbjct: 188  RIGFLRVDTLSLLLSMANIAAHSDVLVVDMVGGLLTGAVAERLGGTGYVCNAYLGDTPYP 247

Query: 939  MDIVRXXXXXXXXCSSIVRSPFSDLCLAASNNVEHFGXXXXXXXXXXXXGDESSSPSLFK 1118
            MDIVR        C  IVRSP   L        E F              ++ SS   F 
Sbjct: 248  MDIVRIFNFSSEICKRIVRSPVDGLRSIQDGTSEQFFQHKGVSNSEIQSNEQMSSQDSFP 307

Query: 1119 LEAVVIQNQVSSPSCLHSVSNAHPSFLSGNENLGPAPTTFMDETDSSSVSRVCKPTKSGE 1298
                            HS+S    +  S N  L   P   M       V++ CK TK+GE
Sbjct: 308  ----------------HSISTEETTLSSENGMLDLIPQ--MVTASPPQVAKTCKATKAGE 349

Query: 1299 KATLEVINLWKASGFSSLIIAAPELDTWSTLQDLLPLLSYSAPFAVYHQYLQPLTTCMHN 1478
             A+L+ INLWK +GFSSL+IAAPELD WS +Q+ LP LSYSA FA+YHQYLQPL TCMHN
Sbjct: 350  NASLDAINLWKENGFSSLLIAAPELDVWSIVQEFLPFLSYSASFAIYHQYLQPLATCMHN 409

Query: 1479 LQVAKLAIGLQISEPWLREYQVLPSRTHPCMQMSAFGGYILSGIKICSTEAQ 1634
            LQ+ K+AIGLQISEPWLREYQVLPSRTHPCMQMSAFGGYILSG +ICS+++Q
Sbjct: 410  LQLGKMAIGLQISEPWLREYQVLPSRTHPCMQMSAFGGYILSGTRICSSDSQ 461


>ref|XP_003549460.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransferase non-catalytic
            subunit trm6-like [Glycine max]
          Length = 440

 Score =  545 bits (1404), Expect = e-152
 Identities = 289/475 (60%), Positives = 355/475 (74%), Gaps = 3/475 (0%)
 Frame = +3

Query: 213  TSSSRITWEGCSVLLDINDGDRLVFARLSNSSTLKIGDKKCSLGPLIGCPFGSTFQLDST 392
            +SSSR+TWEGCSVLLDINDGDRLVFARLS ++ LKIG+K CSL PLIGCPFG+ FQ+D  
Sbjct: 4    SSSSRVTWEGCSVLLDINDGDRLVFARLSPAAKLKIGNKNCSLQPLIGCPFGTVFQVDGP 63

Query: 393  G-SSAPYLSRILVENNNQGDIDVVEGKNEVEIKEESRDNRALVDNNSAQSLSGQDIDALR 569
              S A  + ++   NN+    +V +G+  V+    SRDNRALVDNN+AQSL+G+DI+A+R
Sbjct: 64   FLSPAQGMDKV---NNDNNPEEVRDGRANVD----SRDNRALVDNNTAQSLTGEDIEAMR 116

Query: 570  RQGATGDQIVEALIANSSTFEKKTLFSQEKYRIRKQKKYAPRVLLRRPFARSICEAYFKK 749
            RQGA G++I+EALIANS+TFEKKT FSQEKYR++KQKKYAP+VL+RRP ARSICEAYFKK
Sbjct: 117  RQGAGGNEIIEALIANSATFEKKTSFSQEKYRLKKQKKYAPKVLMRRPVARSICEAYFKK 176

Query: 750  YPARIGYLRMDTLSLLLSMANVSPYSDVLVVDMVGGILTGAVAERLGGTGYVCNTYFGVT 929
            YP++IG+LR+DTLSLLLSM NVS  SD+LVVDMVGG+LTGAVAERLGGTG+VCN+Y G  
Sbjct: 177  YPSKIGFLRVDTLSLLLSMGNVSSNSDILVVDMVGGLLTGAVAERLGGTGFVCNSYIGQA 236

Query: 930  QYPMDIVRXXXXXXXXCSSIVRSPFSDLCLAASNNVEHFGXXXXXXXXXXXXGDESSSPS 1109
             Y MDIVR        C  IVRSP SDL L+   + E                 ++  P 
Sbjct: 237  PYSMDIVRIFNLSDEICKRIVRSPISDL-LSQKESPE-----------------QTLQPD 278

Query: 1110 LFKLEAVVIQNQVSSPSCLHSVSNAHPSFLS--GNENLGPAPTTFMDETDSSSVSRVCKP 1283
                    +Q+Q+S+ + +  +S++  + +S  G EN  PA               V K 
Sbjct: 279  DACNVESHVQDQISASTSMEDISHSSENGISDLGAENTEPA-------------KEVWKA 325

Query: 1284 TKSGEKATLEVINLWKASGFSSLIIAAPELDTWSTLQDLLPLLSYSAPFAVYHQYLQPLT 1463
             K+GE+A  E+I+LWK +GFSSLIIAAPELDTW+ ++D+LPLL+ SAPFA+YHQYLQPL 
Sbjct: 326  PKAGERAQKEIIDLWKENGFSSLIIAAPELDTWTLVRDILPLLADSAPFAIYHQYLQPLA 385

Query: 1464 TCMHNLQVAKLAIGLQISEPWLREYQVLPSRTHPCMQMSAFGGYILSGIKICSTE 1628
            TCMHNLQ+ K+AIGLQI+EPWLREYQVLPSRTHPCMQMS+FGGYILSG KICSTE
Sbjct: 386  TCMHNLQLEKMAIGLQITEPWLREYQVLPSRTHPCMQMSSFGGYILSGTKICSTE 440


>ref|XP_003589467.1| tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit trm6
            [Medicago truncatula] gi|355478515|gb|AES59718.1| tRNA
            (adenine-N(1)-)-methyltransferase non-catalytic subunit
            trm6 [Medicago truncatula]
          Length = 457

 Score =  540 bits (1391), Expect = e-151
 Identities = 283/476 (59%), Positives = 348/476 (73%), Gaps = 6/476 (1%)
 Frame = +3

Query: 216  SSSRITWEGCSVLLDINDGDRLVFARLSNSSTLKIGDKKCSLGPLIGCPFGSTFQLDSTG 395
            +  R+TWEGCSVLLDINDGDRLVFARLS ++ LKIG+K CSL PLIGCPFG+ FQLD++ 
Sbjct: 7    NKKRVTWEGCSVLLDINDGDRLVFARLSPAAKLKIGNKNCSLQPLIGCPFGTVFQLDTSS 66

Query: 396  SSAPYLSRILVENNNQGDIDVVEGKNEVEIKE-----ESRDNRALVDNNSAQSLSGQDID 560
              AP+LS    + N     D+ +G+ + E K+     E RDNR+L+DNN+AQSL+G+DI+
Sbjct: 67   DGAPFLSPFQPKGNINNTEDIKDGRFQAESKDGPLTGELRDNRSLIDNNTAQSLTGEDIE 126

Query: 561  ALRRQGATGDQIVEALIANSSTFEKKTLFSQEKYRIRKQKKYAPRVLLRRPFARSICEAY 740
             +RRQGA GD+I+EALIANS+TF+KKT FSQEKYR++KQKKYAP+VL+RRP ARSICEAY
Sbjct: 127  DMRRQGAKGDEIIEALIANSATFDKKTSFSQEKYRLKKQKKYAPKVLIRRPVARSICEAY 186

Query: 741  FKKYPARIGYLRMDTLSLLLSMANVSPYSDVLVVDMVGGILTGAVAERLGGTGYVCNTYF 920
            F K+P +IG+LR+DTLSLLLSMANVS  SD+LVVDMVGG+LTGAVAERLGGTG+VCN+Y 
Sbjct: 187  FMKHPLKIGFLRVDTLSLLLSMANVSSNSDILVVDMVGGLLTGAVAERLGGTGFVCNSYL 246

Query: 921  GVTQYPMDIVRXXXXXXXXCSSIVRSPFSDLCLAASNNVEHFGXXXXXXXXXXXXGDESS 1100
            G     MDIVR        C  IVRS  SDL                          + S
Sbjct: 247  GKAP-SMDIVRIFNLSDEICKRIVRSSISDL-----------------------LSQKES 282

Query: 1101 SPSLFKLEAVVIQNQVSSPSCLH-SVSNAHPSFLSGNENLGPAPTTFMDETDSSSVSRVC 1277
            S    K +   +++Q+++  C   S+     S  +G  +LG A      E+ +    R C
Sbjct: 283  SQQNPKHDDGSVESQLNNQMCASVSMEEISHSSENGISDLG-ADNAENIESSTFPALRAC 341

Query: 1278 KPTKSGEKATLEVINLWKASGFSSLIIAAPELDTWSTLQDLLPLLSYSAPFAVYHQYLQP 1457
            K  K+GEKA+ E+I+ WK +GFSSLIIAAP+LDTW+ ++DLLPLLS SAPFA+YHQYLQP
Sbjct: 342  KAIKAGEKASQEIIDSWKENGFSSLIIAAPDLDTWTLIKDLLPLLSNSAPFAIYHQYLQP 401

Query: 1458 LTTCMHNLQVAKLAIGLQISEPWLREYQVLPSRTHPCMQMSAFGGYILSGIKICST 1625
            L TCMHNLQ+ K+AIGLQI+EPWLREYQVLPSRTHPCMQMSAFGGYILSG KICS+
Sbjct: 402  LATCMHNLQLEKMAIGLQITEPWLREYQVLPSRTHPCMQMSAFGGYILSGTKICSS 457


>tpg|DAA56013.1| TPA: hypothetical protein ZEAMMB73_887805 [Zea mays]
          Length = 477

 Score =  469 bits (1206), Expect = e-129
 Identities = 254/469 (54%), Positives = 324/469 (69%), Gaps = 5/469 (1%)
 Frame = +3

Query: 225  RITWEGCSVLLDINDGDRLVFARLSNSSTLKIGDKKCSLGPLIGCPFGSTFQLDSTG--- 395
            R  WEGCSVLLDINDGDRL F RL+  +T+KIG+K CSL PL+G PFGS F+L + G   
Sbjct: 10   REAWEGCSVLLDINDGDRLAFFRLTPGATVKIGNKTCSLKPLVGRPFGSLFRLGAGGLVP 69

Query: 396  -SSAPYLSRILVENNNQGDIDVVEGKNEVEIKEESRDNRALVDNNSAQSLSGQDIDALRR 572
             ++A   SR   ++N   D +        + ++E+RDNR+LVDNN+AQ+LS  DI+A++R
Sbjct: 70   CAAADATSR---DHNTPDDANG-------QTQDETRDNRSLVDNNTAQNLSSDDIEAMKR 119

Query: 573  QGATGDQIVEALIANSSTFEKKTLFSQEKYRIRKQKKYAPRVLLRRPFARSICEAYFKKY 752
             GATGD+IVEALIANSSTF  KT+FSQEKY+++KQKKYAP+VLLRRP ARSICE YFKK 
Sbjct: 120  DGATGDEIVEALIANSSTFGNKTVFSQEKYKLKKQKKYAPKVLLRRPSARSICETYFKKT 179

Query: 753  PARIGYLRMDTLSLLLSMANVSPYSDVLVVDMVGGILTGAVAERLGGTGYVCNTYFGVTQ 932
            PARIG++R+DTLSLLLSMAN+  YSDVLVVDMVGG++ GAVAERLGGTGYVC+TY G   
Sbjct: 180  PARIGFMRVDTLSLLLSMANIGAYSDVLVVDMVGGLVVGAVAERLGGTGYVCSTYLGSAP 239

Query: 933  YPMDIVRXXXXXXXXCSSIVRSPFSDLC-LAASNNVEHFGXXXXXXXXXXXXGDESSSPS 1109
              +DI+R         S IV++P S LC + +S N                  DE +  S
Sbjct: 240  SSIDIIRMYNLSSDMVSRIVQAPISALCSMQSSGNTPSVVNSSAEGEMIEPAVDEDAQSS 299

Query: 1110 LFKLEAVVIQNQVSSPSCLHSVSNAHPSFLSGNENLGPAPTTFMDETDSSSVSRVCKPTK 1289
            L +     + ++ +  S     S+   S  S +E+L     + +   DS       KP K
Sbjct: 300  LAQQVDTAVPDEKAQLS-TDQPSDMEVSEPSLDEHLVQDENSSLGGKDSDGTLNASKPPK 358

Query: 1290 SGEKATLEVINLWKASGFSSLIIAAPELDTWSTLQDLLPLLSYSAPFAVYHQYLQPLTTC 1469
             G+  + E +  WK  GFSSLI+AAP  +    + D+LPLLSYSAPFA+YHQ+L+PL  C
Sbjct: 359  PGKAPSPEKMKYWKEHGFSSLIVAAPGHEVERLVADMLPLLSYSAPFAIYHQHLEPLAKC 418

Query: 1470 MHNLQVAKLAIGLQISEPWLREYQVLPSRTHPCMQMSAFGGYILSGIKI 1616
            MH+LQ++K+AIGLQ+SEPWLREYQVLPSRTHP MQM+AFGGYIL+GI+I
Sbjct: 419  MHSLQLSKMAIGLQLSEPWLREYQVLPSRTHPHMQMNAFGGYILNGIRI 467


>ref|XP_003580561.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransferase non-catalytic
            subunit trm6-like [Brachypodium distachyon]
          Length = 475

 Score =  465 bits (1197), Expect = e-128
 Identities = 257/478 (53%), Positives = 319/478 (66%), Gaps = 2/478 (0%)
 Frame = +3

Query: 225  RITWEGCSVLLDINDGDRLVFARLSNSSTLKIGDKKCSLGPLIGCPFGSTFQLDSTGSSA 404
            R  WEGCSVLLDINDGDRL F RL+  +T+KIG+   SL PL+G PFGS F++  +G   
Sbjct: 14   REAWEGCSVLLDINDGDRLAFFRLNPGATVKIGNTSYSLQPLVGRPFGSLFRVGPSG--- 70

Query: 405  PYLSRILVENNNQGDIDVVEGKNEVEIKEESRDNRALVDNNSAQSLSGQDIDALRRQGAT 584
              L     E   Q  + V +G    ++++E+RDNR+LVDNN+AQ+LS +DI+A++R GA+
Sbjct: 71   --LVPCAAEAPPQAQV-VADG----QVQDETRDNRSLVDNNTAQNLSSEDIEAMKRDGAS 123

Query: 585  GDQIVEALIANSSTFEKKTLFSQEKYRIRKQKKYAPRVLLRRPFARSICEAYFKKYPARI 764
            GD IVEALIANSSTF  KT+FSQEKY+++KQKKYAP+VLLRRP  RSICE YFKKYPARI
Sbjct: 124  GDAIVEALIANSSTFGNKTVFSQEKYKLKKQKKYAPKVLLRRPSTRSICETYFKKYPARI 183

Query: 765  GYLRMDTLSLLLSMANVSPYSDVLVVDMVGGILTGAVAERLGGTGYVCNTYFGVTQYPMD 944
            G++R+D LSLLLSMANV  YSDVLVVD+VGG++ GAVAERLGGTGYVCNTY G     +D
Sbjct: 184  GFMRVDALSLLLSMANVGAYSDVLVVDIVGGLVVGAVAERLGGTGYVCNTYLGSAPSNID 243

Query: 945  IVRXXXXXXXXCSSIVRSPFSDLCLAASNNVEHFGXXXXXXXXXXXXGDESSSPSL-FKL 1121
            I+R         S I ++  SD+C   ++     G             DES   SL   +
Sbjct: 244  IIRMYNLSSDMNSRIFQASLSDVCSLQNSGTVLNGNIQGEVVEPSAVSDESPQSSLALPV 303

Query: 1122 EAVVIQNQVSSPSCLH-SVSNAHPSFLSGNENLGPAPTTFMDETDSSSVSRVCKPTKSGE 1298
            +A V      S       +    PS    +ENL     +  D   +   S   KP K+G 
Sbjct: 304  DAAVSDGNAQSTGVQPIKIEVPEPSM---DENLNQDDNSLSDCKGNDDTSIASKPVKAGR 360

Query: 1299 KATLEVINLWKASGFSSLIIAAPELDTWSTLQDLLPLLSYSAPFAVYHQYLQPLTTCMHN 1478
              + E +  W+  GFSSLI+AAP  +  S + DLLPLLSYSAPFA+YHQ+LQPL  CMH+
Sbjct: 361  APSPEKMKYWEEHGFSSLIVAAPGHEVESLVADLLPLLSYSAPFAIYHQHLQPLAICMHS 420

Query: 1479 LQVAKLAIGLQISEPWLREYQVLPSRTHPCMQMSAFGGYILSGIKICSTEAQQKPE*C 1652
            LQV+K AIGLQI+EPWLRE+QVLPSRTHP MQMS FGGYILSGI+I      QKP+ C
Sbjct: 421  LQVSKSAIGLQITEPWLREFQVLPSRTHPHMQMSGFGGYILSGIRI------QKPDPC 472