BLASTX nr result
ID: Coptis24_contig00010363
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00010363 (1169 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002302707.1| predicted protein [Populus trichocarpa] gi|2... 498 e-138 ref|XP_002264804.1| PREDICTED: WD repeat-containing protein 89 h... 487 e-135 emb|CAN75889.1| hypothetical protein VITISV_023641 [Vitis vinifera] 487 e-135 ref|XP_002523062.1| WD-repeat protein, putative [Ricinus communi... 478 e-132 ref|XP_002320348.1| predicted protein [Populus trichocarpa] gi|2... 478 e-132 >ref|XP_002302707.1| predicted protein [Populus trichocarpa] gi|222844433|gb|EEE81980.1| predicted protein [Populus trichocarpa] Length = 378 Score = 498 bits (1281), Expect = e-138 Identities = 228/302 (75%), Positives = 262/302 (86%) Frame = -1 Query: 1157 SSAASPFVLHSCSSDGTVKTWDTRTFNQVLLFNAGSMQEVFSFSFGGASDNLLAAGCKTE 978 SS++SP VLHSCSSDGT++ WDTRTF QV +AGS QE+FSFSFGG++DNLLAAG K++ Sbjct: 77 SSSSSPHVLHSCSSDGTIRAWDTRTFQQVSCISAGSYQEIFSFSFGGSNDNLLAAGAKSQ 136 Query: 977 VLFWDWRNGKQVACLEESHVDDVTQVQFCPDHRNKLFSASVDGLICTFDTEGNINDDDHL 798 +LFWDWRNGKQVACLEESH +DVTQV F PD+RNKL SASVDGL+C F+T+G+INDDDHL Sbjct: 137 ILFWDWRNGKQVACLEESHTEDVTQVHFVPDNRNKLLSASVDGLMCIFNTDGDINDDDHL 196 Query: 797 ESVMNVGTSIGRIGFCGEMSNKLWCLTHIESLSIWDWKDGRNQADFQDARTLASDSWTLD 618 ESV+NVGTSIG++GF GE KLWCLTHIESLSIWDWKD RN+A+ +AR+LASDSWTLD Sbjct: 197 ESVINVGTSIGKVGFFGETYKKLWCLTHIESLSIWDWKDARNEANLLEARSLASDSWTLD 256 Query: 617 HVDYFVDCHYSGADGRLWVIGGTNAGNLGYFPVDYRGTGAIGSPEAILEGGHLGVVRSVL 438 HVDYFVDCHY G LWVIGGTNAG LGYFPV+YRG GAIGSPEAIL GGH GVVRSVL Sbjct: 257 HVDYFVDCHYPGEGESLWVIGGTNAGALGYFPVNYRGVGAIGSPEAILGGGHTGVVRSVL 316 Query: 437 PMSCLNGGHAPNQGIFGWTGGEDGRLCCWLSDETSEVNQSWISNALVMKSQKTLKKNRHH 258 P+S GG A +Q IFGWTGGEDGRLCCWLSD+++E+N+SWIS+ALVMK K KK RH+ Sbjct: 317 PVSSKKGGLAQSQSIFGWTGGEDGRLCCWLSDDSTEINRSWISSALVMKPSKARKKKRHN 376 Query: 257 PY 252 PY Sbjct: 377 PY 378 >ref|XP_002264804.1| PREDICTED: WD repeat-containing protein 89 homolog [Vitis vinifera] Length = 388 Score = 487 bits (1253), Expect = e-135 Identities = 225/304 (74%), Positives = 255/304 (83%) Frame = -1 Query: 1163 SFSSAASPFVLHSCSSDGTVKTWDTRTFNQVLLFNAGSMQEVFSFSFGGASDNLLAAGCK 984 SFS + +LHSCSSDGT++ WDTRTFNQVL +AGS QEVFSFS GG D LLAAGCK Sbjct: 85 SFSGPGNSHILHSCSSDGTIRAWDTRTFNQVLCISAGSSQEVFSFSIGGLGDYLLAAGCK 144 Query: 983 TEVLFWDWRNGKQVACLEESHVDDVTQVQFCPDHRNKLFSASVDGLICTFDTEGNINDDD 804 +++LFWDWRN KQVACLE+SHVDDVTQV F P +NKL SASVDGLICTFDT G+INDDD Sbjct: 145 SQILFWDWRNKKQVACLEDSHVDDVTQVHFVPSDKNKLVSASVDGLICTFDTVGDINDDD 204 Query: 803 HLESVMNVGTSIGRIGFCGEMSNKLWCLTHIESLSIWDWKDGRNQADFQDARTLASDSWT 624 HLESV+NV TSIG++GF G+ KLWCLTHIE+LS+WDWK+ R +A+FQDAR+LASDSWT Sbjct: 205 HLESVINVDTSIGKVGFLGDTYQKLWCLTHIETLSVWDWKEARIEANFQDARSLASDSWT 264 Query: 623 LDHVDYFVDCHYSGADGRLWVIGGTNAGNLGYFPVDYRGTGAIGSPEAILEGGHLGVVRS 444 LD V+YFVDCHYSG D RLWVIGGTNAG LGYFPV+Y+G GAIG PEA+LEGGH GVVRS Sbjct: 265 LDRVNYFVDCHYSGDDQRLWVIGGTNAGTLGYFPVNYQGMGAIGPPEAVLEGGHTGVVRS 324 Query: 443 VLPMSCLNGGHAPNQGIFGWTGGEDGRLCCWLSDETSEVNQSWISNALVMKSQKTLKKNR 264 VLPMS G A +QGIFGWTGGEDGRLCCW SD + E N+SWIS+ VMKS +T KKNR Sbjct: 325 VLPMSSKQIGTAQSQGIFGWTGGEDGRLCCWFSDGSPETNRSWISSEFVMKSPRTCKKNR 384 Query: 263 HHPY 252 H PY Sbjct: 385 HLPY 388 >emb|CAN75889.1| hypothetical protein VITISV_023641 [Vitis vinifera] Length = 383 Score = 487 bits (1253), Expect = e-135 Identities = 225/304 (74%), Positives = 255/304 (83%) Frame = -1 Query: 1163 SFSSAASPFVLHSCSSDGTVKTWDTRTFNQVLLFNAGSMQEVFSFSFGGASDNLLAAGCK 984 SFS + +LHSCSSDGT++ WDTRTFNQVL +AGS QEVFSFS GG D LLAAGCK Sbjct: 80 SFSGPGNSHILHSCSSDGTIRAWDTRTFNQVLCISAGSSQEVFSFSIGGLGDYLLAAGCK 139 Query: 983 TEVLFWDWRNGKQVACLEESHVDDVTQVQFCPDHRNKLFSASVDGLICTFDTEGNINDDD 804 +++LFWDWRN KQVACLE+SHVDDVTQV F P +NKL SASVDGLICTFDT G+INDDD Sbjct: 140 SQILFWDWRNKKQVACLEDSHVDDVTQVHFVPSDKNKLVSASVDGLICTFDTVGDINDDD 199 Query: 803 HLESVMNVGTSIGRIGFCGEMSNKLWCLTHIESLSIWDWKDGRNQADFQDARTLASDSWT 624 HLESV+NV TSIG++GF G+ KLWCLTHIE+LS+WDWK+ R +A+FQDAR+LASDSWT Sbjct: 200 HLESVINVDTSIGKVGFLGDTYQKLWCLTHIETLSVWDWKEARIEANFQDARSLASDSWT 259 Query: 623 LDHVDYFVDCHYSGADGRLWVIGGTNAGNLGYFPVDYRGTGAIGSPEAILEGGHLGVVRS 444 LD V+YFVDCHYSG D RLWVIGGTNAG LGYFPV+Y+G GAIG PEA+LEGGH GVVRS Sbjct: 260 LDRVNYFVDCHYSGDDQRLWVIGGTNAGTLGYFPVNYQGMGAIGPPEAVLEGGHTGVVRS 319 Query: 443 VLPMSCLNGGHAPNQGIFGWTGGEDGRLCCWLSDETSEVNQSWISNALVMKSQKTLKKNR 264 VLPMS G A +QGIFGWTGGEDGRLCCW SD + E N+SWIS+ VMKS +T KKNR Sbjct: 320 VLPMSSKQIGTAQSQGIFGWTGGEDGRLCCWFSDGSPETNRSWISSEFVMKSPRTCKKNR 379 Query: 263 HHPY 252 H PY Sbjct: 380 HLPY 383 >ref|XP_002523062.1| WD-repeat protein, putative [Ricinus communis] gi|223537624|gb|EEF39247.1| WD-repeat protein, putative [Ricinus communis] Length = 389 Score = 478 bits (1231), Expect = e-132 Identities = 217/305 (71%), Positives = 257/305 (84%), Gaps = 1/305 (0%) Frame = -1 Query: 1163 SFSSAASPFVLHSCSSDGTVKTWDTRTFNQVLLFNAGSMQEVFSFSFGGASDNLLAAGCK 984 +FS+++SP VLHSCSSDGT++ WDTRTF QV A + QE+FSFSFGG++DNLLAAG K Sbjct: 85 AFSASSSPHVLHSCSSDGTMRAWDTRTFRQVSCITAAASQEIFSFSFGGSTDNLLAAGSK 144 Query: 983 TEVLFWDWRNGKQVACLEESHVDDVTQVQFCPDHRNKLFSASVDGLICTFDTEGNINDDD 804 +++LFWDWRN KQVACLEESH DDVTQV F P H NKL SASVDGL+C FDT G+INDDD Sbjct: 145 SQILFWDWRNKKQVACLEESHTDDVTQVHFVPGHGNKLLSASVDGLMCIFDTNGDINDDD 204 Query: 803 HLESVMNVGTSIGRIGFCGEMSNKLWCLTHIESLSIWDWKDGRNQADFQDARTLASDSWT 624 HLESV+NVGTS+G++GF GE KLWCLTHIESLSIWDW+D RN+A+ Q+AR++AS +W Sbjct: 205 HLESVINVGTSVGKVGFFGENYQKLWCLTHIESLSIWDWEDARNEANLQEARSMASKNWA 264 Query: 623 LDHVDYFVDCHYSGADGRLWVIGGTNAGNLGYFPVDYR-GTGAIGSPEAILEGGHLGVVR 447 LD +DYFVDCHY G LWVIGGTNAG LGYFPV+YR G AIGSPEAILEGGH GVVR Sbjct: 265 LDQIDYFVDCHYPGEGESLWVIGGTNAGALGYFPVNYRGGAAAIGSPEAILEGGHSGVVR 324 Query: 446 SVLPMSCLNGGHAPNQGIFGWTGGEDGRLCCWLSDETSEVNQSWISNALVMKSQKTLKKN 267 S+LP+S L GG A +QGIFGWTGGEDGRLCCWLSD ++ +++SW+S+AL M+S + KKN Sbjct: 325 SILPLSSLKGGPAQSQGIFGWTGGEDGRLCCWLSDNSARIDRSWMSSALAMRSSTSRKKN 384 Query: 266 RHHPY 252 RHHPY Sbjct: 385 RHHPY 389 >ref|XP_002320348.1| predicted protein [Populus trichocarpa] gi|222861121|gb|EEE98663.1| predicted protein [Populus trichocarpa] Length = 372 Score = 478 bits (1229), Expect = e-132 Identities = 220/304 (72%), Positives = 260/304 (85%) Frame = -1 Query: 1163 SFSSAASPFVLHSCSSDGTVKTWDTRTFNQVLLFNAGSMQEVFSFSFGGASDNLLAAGCK 984 +FS ++SP +LHSCSSDGT++ WDTR F QV ++GS QE+FSFSFGG++DNLLAAG K Sbjct: 72 AFSVSSSPHLLHSCSSDGTIRAWDTRNFQQVSCIDSGSSQEIFSFSFGGSNDNLLAAGAK 131 Query: 983 TEVLFWDWRNGKQVACLEESHVDDVTQVQFCPDHRNKLFSASVDGLICTFDTEGNINDDD 804 ++VLFWDWRNGKQVACLEESH++DVTQV F PD+RNKL SASVDGL+C F+T+G+INDDD Sbjct: 132 SQVLFWDWRNGKQVACLEESHIEDVTQVHFVPDNRNKLLSASVDGLMCIFNTDGDINDDD 191 Query: 803 HLESVMNVGTSIGRIGFCGEMSNKLWCLTHIESLSIWDWKDGRNQADFQDARTLASDSWT 624 LESV+NVGTSIG++GF GE KLWCLTHIESLSIWDWKD RN+A+F +AR+LASDSWT Sbjct: 192 DLESVINVGTSIGKVGFFGETYQKLWCLTHIESLSIWDWKDSRNEANFLEARSLASDSWT 251 Query: 623 LDHVDYFVDCHYSGADGRLWVIGGTNAGNLGYFPVDYRGTGAIGSPEAILEGGHLGVVRS 444 LDHVDYFVDCHY G LW+IGGTNAG LGYFPV+++G IGSPEAIL GGH GVVRS Sbjct: 252 LDHVDYFVDCHYPGEGDSLWLIGGTNAGALGYFPVNHKG---IGSPEAILGGGHTGVVRS 308 Query: 443 VLPMSCLNGGHAPNQGIFGWTGGEDGRLCCWLSDETSEVNQSWISNALVMKSQKTLKKNR 264 VLPMS + GG A ++GIFGWTGGEDGRLCCWLSD+++ +N+SWIS+ALV KS K KK R Sbjct: 309 VLPMSSMKGGPAQSRGIFGWTGGEDGRLCCWLSDDSTGINRSWISSALVKKSPKARKKKR 368 Query: 263 HHPY 252 PY Sbjct: 369 RTPY 372