BLASTX nr result

ID: Coptis24_contig00010363 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010363
         (1169 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302707.1| predicted protein [Populus trichocarpa] gi|2...   498   e-138
ref|XP_002264804.1| PREDICTED: WD repeat-containing protein 89 h...   487   e-135
emb|CAN75889.1| hypothetical protein VITISV_023641 [Vitis vinifera]   487   e-135
ref|XP_002523062.1| WD-repeat protein, putative [Ricinus communi...   478   e-132
ref|XP_002320348.1| predicted protein [Populus trichocarpa] gi|2...   478   e-132

>ref|XP_002302707.1| predicted protein [Populus trichocarpa] gi|222844433|gb|EEE81980.1|
            predicted protein [Populus trichocarpa]
          Length = 378

 Score =  498 bits (1281), Expect = e-138
 Identities = 228/302 (75%), Positives = 262/302 (86%)
 Frame = -1

Query: 1157 SSAASPFVLHSCSSDGTVKTWDTRTFNQVLLFNAGSMQEVFSFSFGGASDNLLAAGCKTE 978
            SS++SP VLHSCSSDGT++ WDTRTF QV   +AGS QE+FSFSFGG++DNLLAAG K++
Sbjct: 77   SSSSSPHVLHSCSSDGTIRAWDTRTFQQVSCISAGSYQEIFSFSFGGSNDNLLAAGAKSQ 136

Query: 977  VLFWDWRNGKQVACLEESHVDDVTQVQFCPDHRNKLFSASVDGLICTFDTEGNINDDDHL 798
            +LFWDWRNGKQVACLEESH +DVTQV F PD+RNKL SASVDGL+C F+T+G+INDDDHL
Sbjct: 137  ILFWDWRNGKQVACLEESHTEDVTQVHFVPDNRNKLLSASVDGLMCIFNTDGDINDDDHL 196

Query: 797  ESVMNVGTSIGRIGFCGEMSNKLWCLTHIESLSIWDWKDGRNQADFQDARTLASDSWTLD 618
            ESV+NVGTSIG++GF GE   KLWCLTHIESLSIWDWKD RN+A+  +AR+LASDSWTLD
Sbjct: 197  ESVINVGTSIGKVGFFGETYKKLWCLTHIESLSIWDWKDARNEANLLEARSLASDSWTLD 256

Query: 617  HVDYFVDCHYSGADGRLWVIGGTNAGNLGYFPVDYRGTGAIGSPEAILEGGHLGVVRSVL 438
            HVDYFVDCHY G    LWVIGGTNAG LGYFPV+YRG GAIGSPEAIL GGH GVVRSVL
Sbjct: 257  HVDYFVDCHYPGEGESLWVIGGTNAGALGYFPVNYRGVGAIGSPEAILGGGHTGVVRSVL 316

Query: 437  PMSCLNGGHAPNQGIFGWTGGEDGRLCCWLSDETSEVNQSWISNALVMKSQKTLKKNRHH 258
            P+S   GG A +Q IFGWTGGEDGRLCCWLSD+++E+N+SWIS+ALVMK  K  KK RH+
Sbjct: 317  PVSSKKGGLAQSQSIFGWTGGEDGRLCCWLSDDSTEINRSWISSALVMKPSKARKKKRHN 376

Query: 257  PY 252
            PY
Sbjct: 377  PY 378


>ref|XP_002264804.1| PREDICTED: WD repeat-containing protein 89 homolog [Vitis vinifera]
          Length = 388

 Score =  487 bits (1253), Expect = e-135
 Identities = 225/304 (74%), Positives = 255/304 (83%)
 Frame = -1

Query: 1163 SFSSAASPFVLHSCSSDGTVKTWDTRTFNQVLLFNAGSMQEVFSFSFGGASDNLLAAGCK 984
            SFS   +  +LHSCSSDGT++ WDTRTFNQVL  +AGS QEVFSFS GG  D LLAAGCK
Sbjct: 85   SFSGPGNSHILHSCSSDGTIRAWDTRTFNQVLCISAGSSQEVFSFSIGGLGDYLLAAGCK 144

Query: 983  TEVLFWDWRNGKQVACLEESHVDDVTQVQFCPDHRNKLFSASVDGLICTFDTEGNINDDD 804
            +++LFWDWRN KQVACLE+SHVDDVTQV F P  +NKL SASVDGLICTFDT G+INDDD
Sbjct: 145  SQILFWDWRNKKQVACLEDSHVDDVTQVHFVPSDKNKLVSASVDGLICTFDTVGDINDDD 204

Query: 803  HLESVMNVGTSIGRIGFCGEMSNKLWCLTHIESLSIWDWKDGRNQADFQDARTLASDSWT 624
            HLESV+NV TSIG++GF G+   KLWCLTHIE+LS+WDWK+ R +A+FQDAR+LASDSWT
Sbjct: 205  HLESVINVDTSIGKVGFLGDTYQKLWCLTHIETLSVWDWKEARIEANFQDARSLASDSWT 264

Query: 623  LDHVDYFVDCHYSGADGRLWVIGGTNAGNLGYFPVDYRGTGAIGSPEAILEGGHLGVVRS 444
            LD V+YFVDCHYSG D RLWVIGGTNAG LGYFPV+Y+G GAIG PEA+LEGGH GVVRS
Sbjct: 265  LDRVNYFVDCHYSGDDQRLWVIGGTNAGTLGYFPVNYQGMGAIGPPEAVLEGGHTGVVRS 324

Query: 443  VLPMSCLNGGHAPNQGIFGWTGGEDGRLCCWLSDETSEVNQSWISNALVMKSQKTLKKNR 264
            VLPMS    G A +QGIFGWTGGEDGRLCCW SD + E N+SWIS+  VMKS +T KKNR
Sbjct: 325  VLPMSSKQIGTAQSQGIFGWTGGEDGRLCCWFSDGSPETNRSWISSEFVMKSPRTCKKNR 384

Query: 263  HHPY 252
            H PY
Sbjct: 385  HLPY 388


>emb|CAN75889.1| hypothetical protein VITISV_023641 [Vitis vinifera]
          Length = 383

 Score =  487 bits (1253), Expect = e-135
 Identities = 225/304 (74%), Positives = 255/304 (83%)
 Frame = -1

Query: 1163 SFSSAASPFVLHSCSSDGTVKTWDTRTFNQVLLFNAGSMQEVFSFSFGGASDNLLAAGCK 984
            SFS   +  +LHSCSSDGT++ WDTRTFNQVL  +AGS QEVFSFS GG  D LLAAGCK
Sbjct: 80   SFSGPGNSHILHSCSSDGTIRAWDTRTFNQVLCISAGSSQEVFSFSIGGLGDYLLAAGCK 139

Query: 983  TEVLFWDWRNGKQVACLEESHVDDVTQVQFCPDHRNKLFSASVDGLICTFDTEGNINDDD 804
            +++LFWDWRN KQVACLE+SHVDDVTQV F P  +NKL SASVDGLICTFDT G+INDDD
Sbjct: 140  SQILFWDWRNKKQVACLEDSHVDDVTQVHFVPSDKNKLVSASVDGLICTFDTVGDINDDD 199

Query: 803  HLESVMNVGTSIGRIGFCGEMSNKLWCLTHIESLSIWDWKDGRNQADFQDARTLASDSWT 624
            HLESV+NV TSIG++GF G+   KLWCLTHIE+LS+WDWK+ R +A+FQDAR+LASDSWT
Sbjct: 200  HLESVINVDTSIGKVGFLGDTYQKLWCLTHIETLSVWDWKEARIEANFQDARSLASDSWT 259

Query: 623  LDHVDYFVDCHYSGADGRLWVIGGTNAGNLGYFPVDYRGTGAIGSPEAILEGGHLGVVRS 444
            LD V+YFVDCHYSG D RLWVIGGTNAG LGYFPV+Y+G GAIG PEA+LEGGH GVVRS
Sbjct: 260  LDRVNYFVDCHYSGDDQRLWVIGGTNAGTLGYFPVNYQGMGAIGPPEAVLEGGHTGVVRS 319

Query: 443  VLPMSCLNGGHAPNQGIFGWTGGEDGRLCCWLSDETSEVNQSWISNALVMKSQKTLKKNR 264
            VLPMS    G A +QGIFGWTGGEDGRLCCW SD + E N+SWIS+  VMKS +T KKNR
Sbjct: 320  VLPMSSKQIGTAQSQGIFGWTGGEDGRLCCWFSDGSPETNRSWISSEFVMKSPRTCKKNR 379

Query: 263  HHPY 252
            H PY
Sbjct: 380  HLPY 383


>ref|XP_002523062.1| WD-repeat protein, putative [Ricinus communis]
            gi|223537624|gb|EEF39247.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 389

 Score =  478 bits (1231), Expect = e-132
 Identities = 217/305 (71%), Positives = 257/305 (84%), Gaps = 1/305 (0%)
 Frame = -1

Query: 1163 SFSSAASPFVLHSCSSDGTVKTWDTRTFNQVLLFNAGSMQEVFSFSFGGASDNLLAAGCK 984
            +FS+++SP VLHSCSSDGT++ WDTRTF QV    A + QE+FSFSFGG++DNLLAAG K
Sbjct: 85   AFSASSSPHVLHSCSSDGTMRAWDTRTFRQVSCITAAASQEIFSFSFGGSTDNLLAAGSK 144

Query: 983  TEVLFWDWRNGKQVACLEESHVDDVTQVQFCPDHRNKLFSASVDGLICTFDTEGNINDDD 804
            +++LFWDWRN KQVACLEESH DDVTQV F P H NKL SASVDGL+C FDT G+INDDD
Sbjct: 145  SQILFWDWRNKKQVACLEESHTDDVTQVHFVPGHGNKLLSASVDGLMCIFDTNGDINDDD 204

Query: 803  HLESVMNVGTSIGRIGFCGEMSNKLWCLTHIESLSIWDWKDGRNQADFQDARTLASDSWT 624
            HLESV+NVGTS+G++GF GE   KLWCLTHIESLSIWDW+D RN+A+ Q+AR++AS +W 
Sbjct: 205  HLESVINVGTSVGKVGFFGENYQKLWCLTHIESLSIWDWEDARNEANLQEARSMASKNWA 264

Query: 623  LDHVDYFVDCHYSGADGRLWVIGGTNAGNLGYFPVDYR-GTGAIGSPEAILEGGHLGVVR 447
            LD +DYFVDCHY G    LWVIGGTNAG LGYFPV+YR G  AIGSPEAILEGGH GVVR
Sbjct: 265  LDQIDYFVDCHYPGEGESLWVIGGTNAGALGYFPVNYRGGAAAIGSPEAILEGGHSGVVR 324

Query: 446  SVLPMSCLNGGHAPNQGIFGWTGGEDGRLCCWLSDETSEVNQSWISNALVMKSQKTLKKN 267
            S+LP+S L GG A +QGIFGWTGGEDGRLCCWLSD ++ +++SW+S+AL M+S  + KKN
Sbjct: 325  SILPLSSLKGGPAQSQGIFGWTGGEDGRLCCWLSDNSARIDRSWMSSALAMRSSTSRKKN 384

Query: 266  RHHPY 252
            RHHPY
Sbjct: 385  RHHPY 389


>ref|XP_002320348.1| predicted protein [Populus trichocarpa] gi|222861121|gb|EEE98663.1|
            predicted protein [Populus trichocarpa]
          Length = 372

 Score =  478 bits (1229), Expect = e-132
 Identities = 220/304 (72%), Positives = 260/304 (85%)
 Frame = -1

Query: 1163 SFSSAASPFVLHSCSSDGTVKTWDTRTFNQVLLFNAGSMQEVFSFSFGGASDNLLAAGCK 984
            +FS ++SP +LHSCSSDGT++ WDTR F QV   ++GS QE+FSFSFGG++DNLLAAG K
Sbjct: 72   AFSVSSSPHLLHSCSSDGTIRAWDTRNFQQVSCIDSGSSQEIFSFSFGGSNDNLLAAGAK 131

Query: 983  TEVLFWDWRNGKQVACLEESHVDDVTQVQFCPDHRNKLFSASVDGLICTFDTEGNINDDD 804
            ++VLFWDWRNGKQVACLEESH++DVTQV F PD+RNKL SASVDGL+C F+T+G+INDDD
Sbjct: 132  SQVLFWDWRNGKQVACLEESHIEDVTQVHFVPDNRNKLLSASVDGLMCIFNTDGDINDDD 191

Query: 803  HLESVMNVGTSIGRIGFCGEMSNKLWCLTHIESLSIWDWKDGRNQADFQDARTLASDSWT 624
             LESV+NVGTSIG++GF GE   KLWCLTHIESLSIWDWKD RN+A+F +AR+LASDSWT
Sbjct: 192  DLESVINVGTSIGKVGFFGETYQKLWCLTHIESLSIWDWKDSRNEANFLEARSLASDSWT 251

Query: 623  LDHVDYFVDCHYSGADGRLWVIGGTNAGNLGYFPVDYRGTGAIGSPEAILEGGHLGVVRS 444
            LDHVDYFVDCHY G    LW+IGGTNAG LGYFPV+++G   IGSPEAIL GGH GVVRS
Sbjct: 252  LDHVDYFVDCHYPGEGDSLWLIGGTNAGALGYFPVNHKG---IGSPEAILGGGHTGVVRS 308

Query: 443  VLPMSCLNGGHAPNQGIFGWTGGEDGRLCCWLSDETSEVNQSWISNALVMKSQKTLKKNR 264
            VLPMS + GG A ++GIFGWTGGEDGRLCCWLSD+++ +N+SWIS+ALV KS K  KK R
Sbjct: 309  VLPMSSMKGGPAQSRGIFGWTGGEDGRLCCWLSDDSTGINRSWISSALVKKSPKARKKKR 368

Query: 263  HHPY 252
              PY
Sbjct: 369  RTPY 372


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