BLASTX nr result

ID: Coptis24_contig00010358 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010358
         (1143 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530527.1| PREDICTED: protein-tyrosine phosphatase mito...   407   e-111
ref|XP_002514193.1| Protein-tyrosine phosphatase mitochondrial 1...   395   e-107
ref|XP_002283341.2| PREDICTED: protein-tyrosine phosphatase mito...   395   e-107
ref|XP_003630688.1| Protein-tyrosine phosphatase mitochondrial [...   385   e-105
gb|AFK41280.1| unknown [Medicago truncatula]                          383   e-104

>ref|XP_003530527.1| PREDICTED: protein-tyrosine phosphatase mitochondrial 1-like [Glycine
            max]
          Length = 282

 Score =  407 bits (1045), Expect = e-111
 Identities = 208/282 (73%), Positives = 231/282 (81%), Gaps = 14/282 (4%)
 Frame = -2

Query: 1070 MKIKESDDNN---------KKEII---VGRVLVGAGARLLFYPTLLYNVFRNKLESEFRW 927
            MKI+E DD           +++I+     R LVGAGAR+LFYPTLLYNV RNK+E+EFRW
Sbjct: 1    MKIEELDDGECSRDEEEKCERQIVSVDAKRALVGAGARILFYPTLLYNVLRNKIEAEFRW 60

Query: 926  WDAVDQFLLLGAVPFPKDVPRLKQLGVGGVITLNEPYETLVPTSLYRAHGIEHLVIPTRD 747
            WD +D+FLLLGAVPFPKDVP LK+LGVGGVITLNEPYETLVP+SLY AHGI+HLVIPTRD
Sbjct: 61   WDQIDEFLLLGAVPFPKDVPHLKKLGVGGVITLNEPYETLVPSSLYHAHGIDHLVIPTRD 120

Query: 746  YLFAPSASDINRAVDFIHRNACCGRTTYVHCKAGRGRSTTIVLCYLVEYKHMTPAAALEY 567
            YLFAPS  DINRAV FIH+NA CG+TTYVHCKAGRGRSTTIVLCY+VEYKHMTPAAALEY
Sbjct: 121  YLFAPSFVDINRAVQFIHQNATCGKTTYVHCKAGRGRSTTIVLCYMVEYKHMTPAAALEY 180

Query: 566  VRSIRPRVLLAPSQWKAVQEFGKCRPSLTASSFSGDEVLITKADLEGYHNISDATKKLNI 387
            VRS RPRVLLAPSQWKAVQ + K RPS    S SGD VLITKADLEGYH+  DA  +L I
Sbjct: 181  VRSRRPRVLLAPSQWKAVQNYNKRRPSPLPYSPSGDAVLITKADLEGYHSTCDAGMELAI 240

Query: 386  VAKAVKVKPMIARLSCLFAALKVSGSNSPVASRLP--QIRAC 267
            V K  K KPMIARLSCLFA+LKVSGS+ P+  RLP  + RAC
Sbjct: 241  VPKMPKTKPMIARLSCLFASLKVSGSSVPMTRRLPVSESRAC 282


>ref|XP_002514193.1| Protein-tyrosine phosphatase mitochondrial 1, mitochondrial
            precursor, putative [Ricinus communis]
            gi|223546649|gb|EEF48147.1| Protein-tyrosine phosphatase
            mitochondrial 1, mitochondrial precursor, putative
            [Ricinus communis]
          Length = 284

 Score =  395 bits (1015), Expect = e-107
 Identities = 204/285 (71%), Positives = 231/285 (81%), Gaps = 17/285 (5%)
 Frame = -2

Query: 1070 MKIKESDDN----------NKKEIIVG----RVLVGAGARLLFYPTLLYNVFRNKLESEF 933
            MKI+E DD           + K+++V     R LVGAGAR+LFYPTLLYNVFRNK++SEF
Sbjct: 1    MKIEELDDVECDQDQIDTVDSKQMMVKVDAKRALVGAGARILFYPTLLYNVFRNKIQSEF 60

Query: 932  RWWDAVDQFLLLGAVPFPKDVPRLKQLGVGGVITLNEPYETLVPTSLYRAHGIEHLVIPT 753
            RWWD +DQ+LLLGAVPFPKDVPRLKQLGVGGVITLNEPYETLVP+SLY AHGIEHLVIPT
Sbjct: 61   RWWDEIDQYLLLGAVPFPKDVPRLKQLGVGGVITLNEPYETLVPSSLYHAHGIEHLVIPT 120

Query: 752  RDYLFAPSASDINRAVDFIHRNACCGRTTYVHCKAGRGRSTTIVLCYLVEYKHMTPAAAL 573
            RDYLFAPS  +I++AVDFIH+NA CG TTYVHCKAGRGRSTTIVLCYLVEYKHM+P  AL
Sbjct: 121  RDYLFAPSFVNISQAVDFIHKNASCGATTYVHCKAGRGRSTTIVLCYLVEYKHMSPMTAL 180

Query: 572  EYVRSIRPRVLLAPSQWKAVQEFGKCRPSLTASSFSGDEVLITKADLEGYHNISD---AT 402
            EYVRS RPRVLLAPSQWKAVQE+ + RP  TA S S D VLITKADLEGYH+  D     
Sbjct: 181  EYVRSRRPRVLLAPSQWKAVQEYSRRRPPPTAHSPSRDAVLITKADLEGYHSACDDDAIG 240

Query: 401  KKLNIVAKAVKVKPMIARLSCLFAALKVSGSNSPVASRLPQIRAC 267
            K+L IV++  K +PM+ARLSCLFA+LKVSG   P   R+P+ RAC
Sbjct: 241  KELAIVSR-TKTRPMMARLSCLFASLKVSGVCGPATGRMPEARAC 284


>ref|XP_002283341.2| PREDICTED: protein-tyrosine phosphatase mitochondrial 1-like isoform
            1 [Vitis vinifera] gi|297738731|emb|CBI27976.3| unnamed
            protein product [Vitis vinifera]
          Length = 280

 Score =  395 bits (1014), Expect = e-107
 Identities = 208/281 (74%), Positives = 232/281 (82%), Gaps = 13/281 (4%)
 Frame = -2

Query: 1070 MKIKESDD--NNKKEIIVGR---------VLVGAGARLLFYPTLLYNVFRNKLESEFRWW 924
            MKI++ DD  ++ KE +  R          LVGAGAR+LFYPTLLYNVFRNK+++EFRWW
Sbjct: 1    MKIEDLDDVESDGKESVYRRQVVKVDAKMALVGAGARILFYPTLLYNVFRNKIQAEFRWW 60

Query: 923  DAVDQFLLLGAVPFPKDVPRLKQLGVGGVITLNEPYETLVPTSLYRAHGIEHLVIPTRDY 744
            D VDQFLLLGAVPFPKDVPRLKQLGVGGVITLNEPYETLVPTSLY AH I+HLVIPTRDY
Sbjct: 61   DEVDQFLLLGAVPFPKDVPRLKQLGVGGVITLNEPYETLVPTSLYHAHEIDHLVIPTRDY 120

Query: 743  LFAPSASDINRAVDFIHRNACCGRTTYVHCKAGRGRSTTIVLCYLVEYKHMTPAAALEYV 564
            LFAPS  DI+RAVDFIH+NA  GRTTYVHCKAGRGRSTTIVLCYLVEYKHMTPAAALEYV
Sbjct: 121  LFAPSFVDISRAVDFIHKNASSGRTTYVHCKAGRGRSTTIVLCYLVEYKHMTPAAALEYV 180

Query: 563  RSIRPRVLLAPSQWKAVQEFGKCRPSLTAS-SFSGDEVLITKADLEGYH-NISDATKKLN 390
            RS RPRVLLAPSQWKAVQE+ K + + T S S SGD VLITKADLEGY  N  DA K+L 
Sbjct: 181  RSRRPRVLLAPSQWKAVQEYNKRQLATTTSYSPSGDAVLITKADLEGYQSNCDDAGKELA 240

Query: 389  IVAKAVKVKPMIARLSCLFAALKVSGSNSPVASRLPQIRAC 267
            I+A+ V+ +PM ARLSCLFA+LK SG   PV+ +L + RAC
Sbjct: 241  IIARVVRARPM-ARLSCLFASLKFSGGCGPVSRQLSEARAC 280


>ref|XP_003630688.1| Protein-tyrosine phosphatase mitochondrial [Medicago truncatula]
            gi|355524710|gb|AET05164.1| Protein-tyrosine phosphatase
            mitochondrial [Medicago truncatula]
          Length = 309

 Score =  385 bits (990), Expect = e-105
 Identities = 201/297 (67%), Positives = 227/297 (76%), Gaps = 32/297 (10%)
 Frame = -2

Query: 1061 KESDDNNKKEII---VGRVLVGAGARLLFYPTLLYNVFRNKLESEFRWWDAVDQFLLLGA 891
            ++ ++N +++I+     R LVGAGAR+LFYPTLLYNV RNK+E+EFRWWD +D+FLLLGA
Sbjct: 13   RDEEENFERQIVRVDAKRALVGAGARILFYPTLLYNVLRNKIETEFRWWDQIDEFLLLGA 72

Query: 890  VPFPKDVPRLKQLGVGGVITLNEPYETLVPTSLYRAHGIEHLVIPTRDYLFAPSASDINR 711
            VPFPKDVP LK LGVGGVITLNEPYETLVP+SLY AHGI+HLVIPTRDYLFAPS  DI+R
Sbjct: 73   VPFPKDVPHLKNLGVGGVITLNEPYETLVPSSLYHAHGIDHLVIPTRDYLFAPSFVDISR 132

Query: 710  AVDFIHRNACCGRTTYVHCKAGRGRSTTIVLCYLVEYKHMTPAAALEYVRSIRPRVLLAP 531
            AV FIH NA CG+TTYVHCKAGRGRSTTIVLCYLVEYKHMTP AALEYVRS RPRVLLAP
Sbjct: 133  AVQFIHHNATCGKTTYVHCKAGRGRSTTIVLCYLVEYKHMTPVAALEYVRSRRPRVLLAP 192

Query: 530  SQWKAVQEFGK-------CRPSLTA--------------------SSFSGDEVLITKADL 432
            SQWKAVQ + K       C PS  A                     S SGD V+ITK DL
Sbjct: 193  SQWKAVQNYYKQRPCPLPCSPSGDAVLKHKDPVQNYNKQRPCPLPHSPSGDTVVITKDDL 252

Query: 431  EGYHNISDATKKLNIVAKAVKVKPMIARLSCLFAALKVSGSNSPVASRLP--QIRAC 267
            EGYH+ SD + +L IV K  K KPMIARLSCLFA+LKVSGS+ P+  RLP  + RAC
Sbjct: 253  EGYHSTSDTSIELAIVPKVPKTKPMIARLSCLFASLKVSGSSVPMTRRLPVSESRAC 309


>gb|AFK41280.1| unknown [Medicago truncatula]
          Length = 309

 Score =  383 bits (984), Expect = e-104
 Identities = 200/297 (67%), Positives = 226/297 (76%), Gaps = 32/297 (10%)
 Frame = -2

Query: 1061 KESDDNNKKEII---VGRVLVGAGARLLFYPTLLYNVFRNKLESEFRWWDAVDQFLLLGA 891
            ++ ++N +++I+     R LVGAGAR+LFYPTLLYNV RNK+E+EFRWWD +D+FLLLGA
Sbjct: 13   RDEEENFERQIVRVDAKRALVGAGARILFYPTLLYNVLRNKIETEFRWWDQIDEFLLLGA 72

Query: 890  VPFPKDVPRLKQLGVGGVITLNEPYETLVPTSLYRAHGIEHLVIPTRDYLFAPSASDINR 711
            VPFPKDVP LK LGVGGVITLNEPYETLVP+SLY AHGI+HLVIPTRDYLFAPS  DI+R
Sbjct: 73   VPFPKDVPHLKNLGVGGVITLNEPYETLVPSSLYHAHGIDHLVIPTRDYLFAPSFVDISR 132

Query: 710  AVDFIHRNACCGRTTYVHCKAGRGRSTTIVLCYLVEYKHMTPAAALEYVRSIRPRVLLAP 531
            AV FIH NA CG+TTYVHCKAGRGRSTTIVLCYLVEYKHMTP AALEYVRS RPRVLLAP
Sbjct: 133  AVQFIHHNATCGKTTYVHCKAGRGRSTTIVLCYLVEYKHMTPVAALEYVRSRRPRVLLAP 192

Query: 530  SQWKAVQEFGK-------CRPSLTA--------------------SSFSGDEVLITKADL 432
            SQWKAVQ + K       C PS  A                     S SGD V+ITK DL
Sbjct: 193  SQWKAVQNYYKQRPCPLPCSPSGDAVLKHKDPVQNYNKQRPCPLPHSPSGDTVVITKDDL 252

Query: 431  EGYHNISDATKKLNIVAKAVKVKPMIARLSCLFAALKVSGSNSPVASRLP--QIRAC 267
            EGYH+  D + +L IV K  K KPMIARLSCLFA+LKVSGS+ P+  RLP  + RAC
Sbjct: 253  EGYHSTFDTSIELAIVPKVPKTKPMIARLSCLFASLKVSGSSVPMTRRLPVFESRAC 309


Top