BLASTX nr result
ID: Coptis24_contig00010357
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00010357 (2288 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002285332.1| PREDICTED: probable E3 ubiquitin-protein lig... 726 0.0 ref|XP_002321983.1| predicted protein [Populus trichocarpa] gi|2... 729 0.0 emb|CAN77314.1| hypothetical protein VITISV_008041 [Vitis vinifera] 721 0.0 ref|XP_003551939.1| PREDICTED: probable E3 ubiquitin-protein lig... 718 0.0 ref|XP_003601869.1| RCC1 domain-containing protein [Medicago tru... 717 0.0 >ref|XP_002285332.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 isoform 1 [Vitis vinifera] gi|296081404|emb|CBI16837.3| unnamed protein product [Vitis vinifera] Length = 534 Score = 726 bits (1875), Expect(2) = 0.0 Identities = 358/457 (78%), Positives = 387/457 (84%) Frame = -1 Query: 1622 ATCSFFKQPANFAPDYELSISELAALDMCRKRAVFKPMTTSEQEELKQRCGGSWKLVLRF 1443 ATCSFF+QPA+FAPD+ELSISELAALDMC KRA+F+PM E+E LKQRCGGSWKLVLRF Sbjct: 76 ATCSFFRQPAHFAPDFELSISELAALDMCLKRAIFRPMMLEEREVLKQRCGGSWKLVLRF 135 Query: 1442 LLAGEACCRREKFQAIAGPGHSIVVTSKGKVYSFGSNSSGQLGHGTLEEESRPHPIRSLQ 1263 LLAGEACCRREK QAIAGPGHSI VT KG VYSFGSNSSGQLGHGT +EE RP IRSL+ Sbjct: 136 LLAGEACCRREKSQAIAGPGHSIAVTVKGAVYSFGSNSSGQLGHGTTDEEWRPRQIRSLE 195 Query: 1262 GVRIIQAAAGAGRTMLISDAGHVYAFGKDSFGEAEYGAQGTKFVMTPHRLESLKNIFVVQ 1083 G+RIIQAAAGAGRTMLISDAG VYAFGKDSFGEAEYG QGTK V TP +ESLKNIFVVQ Sbjct: 196 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTTPQLVESLKNIFVVQ 255 Query: 1082 AAIGNFFTAILSREGRVYTFSWGNDATLGHQTDPSDLEPHPLLGPLENVPIVQIXXXXXX 903 AAIGNFFTA+LSREGRVYTFSWGNDA LGHQT+ +DLEPHPLLG LEN+P+VQI Sbjct: 256 AAIGNFFTAVLSREGRVYTFSWGNDAKLGHQTEANDLEPHPLLGALENIPVVQIAAGYCY 315 Query: 902 XXXXXCQPGGMSVYSVXXXXXXXXXXGSRTDERYPKLIEQFQTLNLQPXXXXXXXXXXXX 723 CQP GMSVYSV G+RTDE++P+LIEQF+ LNLQP Sbjct: 316 LLALACQPNGMSVYSVGCGLGGKLGHGTRTDEKHPRLIEQFRILNLQPMVVAAGAWHAAV 375 Query: 722 VGRDGRVCTWGWGRYGCLGHGNEECESIPKVVEALAEIKAVHVATGDYTTFVVSEDGDVY 543 VGRDGRVCTWGWGRYGCLGHGNEECES+PKVVEAL +KAVHVATGDYTTFVVS+DGDVY Sbjct: 376 VGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALINVKAVHVATGDYTTFVVSDDGDVY 435 Query: 542 SFGCGESSSLGHNAGADGQENRHTNVLTPELVTSLKQVNERFVQISLTNSIYWNAHTFAL 363 SFGCGESSSLGHN G DGQ NRH N+L+PELVTSLKQ+ ER VQISLTNSIYWNAHTFAL Sbjct: 436 SFGCGESSSLGHNNGPDGQGNRHANILSPELVTSLKQIKERMVQISLTNSIYWNAHTFAL 495 Query: 362 TESGKLYAFGAGDKGQLGLELAGQQSERGKPELVDID 252 TE+GKLYAFGAGDKGQLG+EL Q+ERG PE VDID Sbjct: 496 TETGKLYAFGAGDKGQLGVELVANQTERGNPERVDID 532 Score = 115 bits (289), Expect(2) = 0.0 Identities = 54/76 (71%), Positives = 60/76 (78%) Frame = -2 Query: 1915 MDTTVSGTPSIHYHNIVDQXXXXXXXXXSPTFQRQQRHCFGESTPGEFPLAANPSIVLHV 1736 MD T SGTP++ YHNI DQ PTFQRQQRHCFG+S+PGEFPLAANPSIVLHV Sbjct: 1 MDATRSGTPTVQYHNIPDQPIAAIVTSPLPTFQRQQRHCFGDSSPGEFPLAANPSIVLHV 60 Query: 1735 LTGCDLDPQDLATLEA 1688 LT C+L+PQDLA LEA Sbjct: 61 LTACNLEPQDLAKLEA 76 >ref|XP_002321983.1| predicted protein [Populus trichocarpa] gi|222868979|gb|EEF06110.1| predicted protein [Populus trichocarpa] Length = 538 Score = 729 bits (1881), Expect(2) = 0.0 Identities = 356/457 (77%), Positives = 389/457 (85%) Frame = -1 Query: 1622 ATCSFFKQPANFAPDYELSISELAALDMCRKRAVFKPMTTSEQEELKQRCGGSWKLVLRF 1443 ATCSFF+QPA+FAPDYELS+SELAALDMC+KRA+FKPMT E+++LKQRCGGSWKLVLRF Sbjct: 80 ATCSFFRQPASFAPDYELSMSELAALDMCQKRAIFKPMTPEERQDLKQRCGGSWKLVLRF 139 Query: 1442 LLAGEACCRREKFQAIAGPGHSIVVTSKGKVYSFGSNSSGQLGHGTLEEESRPHPIRSLQ 1263 LLAGEACCRRE+ QAIAGPGHSI VTS G YSFGSNSSGQLGHGT EEE RP IRSLQ Sbjct: 140 LLAGEACCRRERSQAIAGPGHSIAVTSNGVAYSFGSNSSGQLGHGTTEEEWRPRQIRSLQ 199 Query: 1262 GVRIIQAAAGAGRTMLISDAGHVYAFGKDSFGEAEYGAQGTKFVMTPHRLESLKNIFVVQ 1083 G+RIIQAAAG GRTMLISDAG VYAFGKDSFGEAEYG QGTK V TP +ESLKNIFVVQ Sbjct: 200 GIRIIQAAAGPGRTMLISDAGEVYAFGKDSFGEAEYGVQGTKTVTTPQLVESLKNIFVVQ 259 Query: 1082 AAIGNFFTAILSREGRVYTFSWGNDATLGHQTDPSDLEPHPLLGPLENVPIVQIXXXXXX 903 AAIGNFFTA+LSREGRVYTFSWGND LGHQT+P+D+ PHPLLG LEN+P+VQI Sbjct: 260 AAIGNFFTAVLSREGRVYTFSWGNDGKLGHQTEPNDVVPHPLLGALENIPVVQIAAGYCY 319 Query: 902 XXXXXCQPGGMSVYSVXXXXXXXXXXGSRTDERYPKLIEQFQTLNLQPXXXXXXXXXXXX 723 CQP GMSVYSV GSRTDE+YP+LIEQFQ LNLQP Sbjct: 320 LLALACQPSGMSVYSVGCGLGGKLGHGSRTDEKYPRLIEQFQLLNLQPMVVAAGAWHAAV 379 Query: 722 VGRDGRVCTWGWGRYGCLGHGNEECESIPKVVEALAEIKAVHVATGDYTTFVVSEDGDVY 543 VGRDGRVCTWGWGRYGCLGHGNEECES+PKVV+AL+++KAVHVATGDYTTFVVS+DGDVY Sbjct: 380 VGRDGRVCTWGWGRYGCLGHGNEECESVPKVVDALSKVKAVHVATGDYTTFVVSDDGDVY 439 Query: 542 SFGCGESSSLGHNAGADGQENRHTNVLTPELVTSLKQVNERFVQISLTNSIYWNAHTFAL 363 SFGCGES+SLGHN DGQ NRHTNVL+PELVTSLK+V ER VQISLTNS+YWNAHTFAL Sbjct: 440 SFGCGESASLGHNGDGDGQGNRHTNVLSPELVTSLKEVKERVVQISLTNSVYWNAHTFAL 499 Query: 362 TESGKLYAFGAGDKGQLGLELAGQQSERGKPELVDID 252 TESGKL+AFGAGDKGQLG+EL Q+ERG PE VD+D Sbjct: 500 TESGKLFAFGAGDKGQLGMELVNNQTERGNPEQVDVD 536 Score = 112 bits (280), Expect(2) = 0.0 Identities = 53/76 (69%), Positives = 58/76 (76%) Frame = -2 Query: 1915 MDTTVSGTPSIHYHNIVDQXXXXXXXXXSPTFQRQQRHCFGESTPGEFPLAANPSIVLHV 1736 MD+T SGTP+I YHNI DQ T+QR QRHCFG+S PGEFPLAANPSIVLHV Sbjct: 1 MDSTTSGTPTIQYHNITDQPVTAIVAVPVSTYQRNQRHCFGDSIPGEFPLAANPSIVLHV 60 Query: 1735 LTGCDLDPQDLATLEA 1688 LT C+LDPQDLA LEA Sbjct: 61 LTTCNLDPQDLAKLEA 76 >emb|CAN77314.1| hypothetical protein VITISV_008041 [Vitis vinifera] Length = 541 Score = 721 bits (1860), Expect(2) = 0.0 Identities = 355/452 (78%), Positives = 383/452 (84%) Frame = -1 Query: 1622 ATCSFFKQPANFAPDYELSISELAALDMCRKRAVFKPMTTSEQEELKQRCGGSWKLVLRF 1443 ATCSFF+QPA+FAPD+ELSISELAALDMC KRA+F+PM E+E LKQRCGGSWKLVLRF Sbjct: 78 ATCSFFRQPAHFAPDFELSISELAALDMCLKRAIFRPMXLEEREVLKQRCGGSWKLVLRF 137 Query: 1442 LLAGEACCRREKFQAIAGPGHSIVVTSKGKVYSFGSNSSGQLGHGTLEEESRPHPIRSLQ 1263 LLAGEACCRREK QAIAGPGHSI VT KG VYSFGSNSSGQLGHGT +EE RP IRSL+ Sbjct: 138 LLAGEACCRREKSQAIAGPGHSIAVTVKGAVYSFGSNSSGQLGHGTTDEEWRPRQIRSLE 197 Query: 1262 GVRIIQAAAGAGRTMLISDAGHVYAFGKDSFGEAEYGAQGTKFVMTPHRLESLKNIFVVQ 1083 G+RIIQAAAGAGRTMLISDAG VYAFGKDSFGEAEYG QGTK V TP +ESLKNIFVVQ Sbjct: 198 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTTPQLVESLKNIFVVQ 257 Query: 1082 AAIGNFFTAILSREGRVYTFSWGNDATLGHQTDPSDLEPHPLLGPLENVPIVQIXXXXXX 903 AAIGNFFTA+LSREGRVYTFSWGNDA LGHQT+ +DLEPHPLLG LEN+P+VQI Sbjct: 258 AAIGNFFTAVLSREGRVYTFSWGNDAKLGHQTEANDLEPHPLLGALENIPVVQIAAGYCY 317 Query: 902 XXXXXCQPGGMSVYSVXXXXXXXXXXGSRTDERYPKLIEQFQTLNLQPXXXXXXXXXXXX 723 CQP GMSVYSV G+RTDE++P+LIEQFQ LNLQP Sbjct: 318 LLALACQPNGMSVYSVGCGLGGKLGHGTRTDEKHPRLIEQFQILNLQPMVVAAGAWHAAV 377 Query: 722 VGRDGRVCTWGWGRYGCLGHGNEECESIPKVVEALAEIKAVHVATGDYTTFVVSEDGDVY 543 VGRDGRVCTWGWGRYGCLGHGNEECES+PKVVEAL +KAVHVATGDYTTFVVS+DGDVY Sbjct: 378 VGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALINVKAVHVATGDYTTFVVSDDGDVY 437 Query: 542 SFGCGESSSLGHNAGADGQENRHTNVLTPELVTSLKQVNERFVQISLTNSIYWNAHTFAL 363 SFGCGESSSLGHN G DGQ NRH N+L+PELVTSLKQ+ ER VQISLTNSIYWNAHTFAL Sbjct: 438 SFGCGESSSLGHNNGPDGQGNRHANILSPELVTSLKQIKERMVQISLTNSIYWNAHTFAL 497 Query: 362 TESGKLYAFGAGDKGQLGLELAGQQSERGKPE 267 TE+GKLYAFGAGDKGQLG+EL Q+ERG PE Sbjct: 498 TETGKLYAFGAGDKGQLGVELVXNQTERGNPE 529 Score = 115 bits (289), Expect(2) = 0.0 Identities = 54/76 (71%), Positives = 60/76 (78%) Frame = -2 Query: 1915 MDTTVSGTPSIHYHNIVDQXXXXXXXXXSPTFQRQQRHCFGESTPGEFPLAANPSIVLHV 1736 MD T SGTP++ YHNI DQ PTFQRQQRHCFG+S+PGEFPLAANPSIVLHV Sbjct: 1 MDATRSGTPTVQYHNIPDQPIAAIVTSPLPTFQRQQRHCFGDSSPGEFPLAANPSIVLHV 60 Query: 1735 LTGCDLDPQDLATLEA 1688 LT C+L+PQDLA LEA Sbjct: 61 LTACNLEPQDLAKLEA 76 >ref|XP_003551939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine max] Length = 535 Score = 718 bits (1853), Expect(2) = 0.0 Identities = 353/458 (77%), Positives = 388/458 (84%), Gaps = 1/458 (0%) Frame = -1 Query: 1622 ATCSFFKQPANFAPDYELSISELAALDMCRKRAVFKPMTTSEQEELKQRCGGSWKLVLRF 1443 ATCSFF+QPANFAPD +LS+SELAALDMC+KRA+FKPMTT ++++LK RCGGSWKL LR+ Sbjct: 76 ATCSFFRQPANFAPDLDLSLSELAALDMCQKRAIFKPMTTEQRQDLKLRCGGSWKLALRY 135 Query: 1442 LLAGEACCRREKFQAIAGPGHSIVVTSKGKVYSFGSNSSGQLGHGTLEEESRPHPIRSLQ 1263 L+AGEACCRREK QAIAGPGHSI VTSKG VYSFGSNSSGQLGHGT +EE RP PIR+LQ Sbjct: 136 LMAGEACCRREKSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTDEEWRPRPIRTLQ 195 Query: 1262 GVRIIQAAAGAGRTMLISDAGHVYAFGKDSFGEAEYGAQGTKFVMTPHRLESLKNIFVVQ 1083 G+RIIQAAAGAGRTML+SD+G VYAFGKDSFGEAEYG QG+K V P +ESLKNIFVVQ Sbjct: 196 GIRIIQAAAGAGRTMLVSDSGQVYAFGKDSFGEAEYGVQGSKTVAAPQIVESLKNIFVVQ 255 Query: 1082 AAIGNFFTAILSREGRVYTFSWGNDATLGHQTDPSDLEPHPLLGPLENVPIVQIXXXXXX 903 AAIGNFFTA+LSREGRVYTFSWG+D LGH TD SD+EPHPLLG LEN+P+VQI Sbjct: 256 AAIGNFFTAVLSREGRVYTFSWGSDGKLGHHTDQSDVEPHPLLGALENIPVVQIAAGYCY 315 Query: 902 XXXXXCQPGGMSVYSVXXXXXXXXXXGSRTDERYPKLIEQFQTLNLQPXXXXXXXXXXXX 723 CQP GMSVYSV GSRTDE+YP+LIEQF LNLQP Sbjct: 316 LLCLACQPSGMSVYSVGCGLGGKLGHGSRTDEKYPRLIEQFGLLNLQPMVVAAGAWHAAV 375 Query: 722 VGRDGRVCTWGWGRYGCLGHGNEECESIPKVVEALAEIKAVHVATGDYTTFVVSEDGDVY 543 VGRDGRVCTWGWGRYGCLGHGNEECES+PKVVEAL+ +KAVHVATGDYTTFVVS+DGDVY Sbjct: 376 VGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALSNVKAVHVATGDYTTFVVSDDGDVY 435 Query: 542 SFGCGESSSLGHN-AGADGQENRHTNVLTPELVTSLKQVNERFVQISLTNSIYWNAHTFA 366 SFGCGES+SLGHN AG D Q NRH NVL+PELVTSLKQ+NER VQISLTNSIYWNAHTFA Sbjct: 436 SFGCGESASLGHNAAGNDEQGNRHANVLSPELVTSLKQINERVVQISLTNSIYWNAHTFA 495 Query: 365 LTESGKLYAFGAGDKGQLGLELAGQQSERGKPELVDID 252 LTESGKLYAFGAGDKGQLG+EL Q+ERG PE V+ID Sbjct: 496 LTESGKLYAFGAGDKGQLGIELVANQTERGNPERVEID 533 Score = 117 bits (293), Expect(2) = 0.0 Identities = 54/76 (71%), Positives = 60/76 (78%) Frame = -2 Query: 1915 MDTTVSGTPSIHYHNIVDQXXXXXXXXXSPTFQRQQRHCFGESTPGEFPLAANPSIVLHV 1736 MD T SGTP++ YHNI DQ PTFQRQQRHCFG+STPGEFPL+ANPSIVLHV Sbjct: 1 MDATTSGTPTVQYHNIPDQPITAIIATPLPTFQRQQRHCFGDSTPGEFPLSANPSIVLHV 60 Query: 1735 LTGCDLDPQDLATLEA 1688 LT C+L+PQDLA LEA Sbjct: 61 LTACNLEPQDLAKLEA 76 >ref|XP_003601869.1| RCC1 domain-containing protein [Medicago truncatula] gi|355490917|gb|AES72120.1| RCC1 domain-containing protein [Medicago truncatula] Length = 535 Score = 717 bits (1850), Expect(2) = 0.0 Identities = 350/457 (76%), Positives = 386/457 (84%) Frame = -1 Query: 1622 ATCSFFKQPANFAPDYELSISELAALDMCRKRAVFKPMTTSEQEELKQRCGGSWKLVLRF 1443 ATCSFF+QPANFAPD+ LS++ELAA DMC KRA+FKPMTT E+++LKQRCGGSWKLVLR+ Sbjct: 77 ATCSFFRQPANFAPDFALSLAELAAFDMCMKRAIFKPMTTEERQDLKQRCGGSWKLVLRY 136 Query: 1442 LLAGEACCRREKFQAIAGPGHSIVVTSKGKVYSFGSNSSGQLGHGTLEEESRPHPIRSLQ 1263 LLAGEACCRREK QAIAGPGHSI VTSKG VYSFGSNSSGQLGHGT EEE RP PIR+LQ Sbjct: 137 LLAGEACCRREKSQAIAGPGHSIAVTSKGDVYSFGSNSSGQLGHGTTEEEWRPKPIRTLQ 196 Query: 1262 GVRIIQAAAGAGRTMLISDAGHVYAFGKDSFGEAEYGAQGTKFVMTPHRLESLKNIFVVQ 1083 G+RIIQAAAGAGRTMLI+D+G VYAFGKDSFGEAEYG QG+K V+ P +ESLKNIFVVQ Sbjct: 197 GIRIIQAAAGAGRTMLITDSGQVYAFGKDSFGEAEYGGQGSKTVIAPRLVESLKNIFVVQ 256 Query: 1082 AAIGNFFTAILSREGRVYTFSWGNDATLGHQTDPSDLEPHPLLGPLENVPIVQIXXXXXX 903 AAIGNFFTA+LSREGRVYTFSWG+D LGH TD +D+EPHPLLG LE++P+VQI Sbjct: 257 AAIGNFFTAVLSREGRVYTFSWGSDGKLGHHTDSNDMEPHPLLGALEDIPVVQIAAGYCY 316 Query: 902 XXXXXCQPGGMSVYSVXXXXXXXXXXGSRTDERYPKLIEQFQTLNLQPXXXXXXXXXXXX 723 CQP GMSVYSV G+RTDE++P+LIEQFQTLNLQP Sbjct: 317 LLCLACQPSGMSVYSVGCGLGGKLGHGTRTDEKFPRLIEQFQTLNLQPMVISAGAWHAAV 376 Query: 722 VGRDGRVCTWGWGRYGCLGHGNEECESIPKVVEALAEIKAVHVATGDYTTFVVSEDGDVY 543 VGRDGRVCTWGWGRYGCLGHGNEECE+ PKVV+AL +KAVHVATGDYTTFVV+EDGDVY Sbjct: 377 VGRDGRVCTWGWGRYGCLGHGNEECEAAPKVVDALTNVKAVHVATGDYTTFVVAEDGDVY 436 Query: 542 SFGCGESSSLGHNAGADGQENRHTNVLTPELVTSLKQVNERFVQISLTNSIYWNAHTFAL 363 SFGCGES+SLGHNA D + NRH NVL PELVTSLKQ+NER VQISLTNSIYWNAHTFAL Sbjct: 437 SFGCGESASLGHNAVIDAEGNRHANVLNPELVTSLKQINERVVQISLTNSIYWNAHTFAL 496 Query: 362 TESGKLYAFGAGDKGQLGLELAGQQSERGKPELVDID 252 TESGKLYAFGAGDKGQLG+EL Q+ER PE VDID Sbjct: 497 TESGKLYAFGAGDKGQLGIELVANQTERVNPEQVDID 533 Score = 107 bits (267), Expect(2) = 0.0 Identities = 53/77 (68%), Positives = 57/77 (74%), Gaps = 1/77 (1%) Frame = -2 Query: 1915 MDTTVSGTPSIHYHNIVDQXXXXXXXXXS-PTFQRQQRHCFGESTPGEFPLAANPSIVLH 1739 MD T SGTP+I YHNI DQ PTFQRQQR C G STPGEFPL+A+PSIVLH Sbjct: 1 MDATTSGTPTIQYHNITDQTITAIVVATPLPTFQRQQRQCLGNSTPGEFPLSASPSIVLH 60 Query: 1738 VLTGCDLDPQDLATLEA 1688 VLT C+LDPQDLA LEA Sbjct: 61 VLTSCNLDPQDLAKLEA 77