BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010350
         (617 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144493.1| PREDICTED: 50S ribosomal protein L6, chlorop...   208   5e-52
ref|XP_002279657.2| PREDICTED: 50S ribosomal protein L6, chlorop...   201   9e-50
ref|XP_003548188.1| PREDICTED: 50S ribosomal protein L6, chlorop...   198   7e-49
ref|XP_003548187.1| PREDICTED: 50S ribosomal protein L6, chlorop...   198   7e-49
ref|XP_003534001.1| PREDICTED: 50S ribosomal protein L6, chlorop...   198   7e-49

>ref|XP_004144493.1| PREDICTED: 50S ribosomal protein L6, chloroplastic-like [Cucumis
           sativus] gi|449515641|ref|XP_004164857.1| PREDICTED: 50S
           ribosomal protein L6, chloroplastic-like [Cucumis
           sativus]
          Length = 233

 Score =  208 bits (530), Expect = 5e-52
 Identities = 97/108 (89%), Positives = 106/108 (98%)
 Frame = +3

Query: 3   MHGLFRTLTDNMVVGVSKGFEKKLQLVGVGYRAMLENRDLVLNLGFSHPVRMPIPDGLQV 182
           MHGLFRTLTDNMVVGVSKGFEKKLQL+GVGYRAM+E +DLVLNLGFSHPVRM IPDG+Q+
Sbjct: 117 MHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMAIPDGIQI 176

Query: 183 KVEENTRITVSGYDKCSIGEFAASVRKWRPPEPYKGKGVKYADEIVRR 326
           KVEENTRITVSGYDKC+IG+FAAS+R+WRPPEPYKGKGVKYADEIVRR
Sbjct: 177 KVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEIVRR 224


>ref|XP_002279657.2| PREDICTED: 50S ribosomal protein L6, chloroplastic-like [Vitis
           vinifera] gi|297739290|emb|CBI28941.3| unnamed protein
           product [Vitis vinifera]
          Length = 226

 Score =  201 bits (511), Expect = 9e-50
 Identities = 96/108 (88%), Positives = 103/108 (95%)
 Frame = +3

Query: 3   MHGLFRTLTDNMVVGVSKGFEKKLQLVGVGYRAMLENRDLVLNLGFSHPVRMPIPDGLQV 182
           MHGLFRTLTDNMVVGVSKGFEK+LQLVGVGYRA +E +DLVLNLGFSHPVRMPIP  L+V
Sbjct: 110 MHGLFRTLTDNMVVGVSKGFEKRLQLVGVGYRATVEGKDLVLNLGFSHPVRMPIPGDLKV 169

Query: 183 KVEENTRITVSGYDKCSIGEFAASVRKWRPPEPYKGKGVKYADEIVRR 326
           KVE+NTRI VSGYDKC+IG+FAASVRKWRPPEPYKGKGVKYADEIVRR
Sbjct: 170 KVEDNTRIIVSGYDKCNIGQFAASVRKWRPPEPYKGKGVKYADEIVRR 217


>ref|XP_003548188.1| PREDICTED: 50S ribosomal protein L6, chloroplastic-like isoform 2
           [Glycine max]
          Length = 223

 Score =  198 bits (503), Expect = 7e-49
 Identities = 92/108 (85%), Positives = 103/108 (95%)
 Frame = +3

Query: 3   MHGLFRTLTDNMVVGVSKGFEKKLQLVGVGYRAMLENRDLVLNLGFSHPVRMPIPDGLQV 182
           MHGLFRTLTDN+V+GVSKGF+KKLQLVGVGYRAM+E  ++VLNLGFSHPV+M IPDGL+V
Sbjct: 107 MHGLFRTLTDNLVIGVSKGFDKKLQLVGVGYRAMVEGNEVVLNLGFSHPVKMTIPDGLKV 166

Query: 183 KVEENTRITVSGYDKCSIGEFAASVRKWRPPEPYKGKGVKYADEIVRR 326
           KVEENTRITVSGYDK  +G+FAAS+RKWRPPEPYKGKGVKYADEIVRR
Sbjct: 167 KVEENTRITVSGYDKSEVGQFAASIRKWRPPEPYKGKGVKYADEIVRR 214


>ref|XP_003548187.1| PREDICTED: 50S ribosomal protein L6, chloroplastic-like isoform 1
           [Glycine max]
          Length = 226

 Score =  198 bits (503), Expect = 7e-49
 Identities = 92/108 (85%), Positives = 103/108 (95%)
 Frame = +3

Query: 3   MHGLFRTLTDNMVVGVSKGFEKKLQLVGVGYRAMLENRDLVLNLGFSHPVRMPIPDGLQV 182
           MHGLFRTLTDN+V+GVSKGF+KKLQLVGVGYRAM+E  ++VLNLGFSHPV+M IPDGL+V
Sbjct: 110 MHGLFRTLTDNLVIGVSKGFDKKLQLVGVGYRAMVEGNEVVLNLGFSHPVKMTIPDGLKV 169

Query: 183 KVEENTRITVSGYDKCSIGEFAASVRKWRPPEPYKGKGVKYADEIVRR 326
           KVEENTRITVSGYDK  +G+FAAS+RKWRPPEPYKGKGVKYADEIVRR
Sbjct: 170 KVEENTRITVSGYDKSEVGQFAASIRKWRPPEPYKGKGVKYADEIVRR 217


>ref|XP_003534001.1| PREDICTED: 50S ribosomal protein L6, chloroplastic-like [Glycine
           max]
          Length = 226

 Score =  198 bits (503), Expect = 7e-49
 Identities = 92/108 (85%), Positives = 103/108 (95%)
 Frame = +3

Query: 3   MHGLFRTLTDNMVVGVSKGFEKKLQLVGVGYRAMLENRDLVLNLGFSHPVRMPIPDGLQV 182
           MHGLFRTLTDN+V+GVSKGFEKKLQLVGVGYRAM+E  ++VLNLGFSHPV+M IPDGL+V
Sbjct: 110 MHGLFRTLTDNLVIGVSKGFEKKLQLVGVGYRAMVEGNEVVLNLGFSHPVKMIIPDGLKV 169

Query: 183 KVEENTRITVSGYDKCSIGEFAASVRKWRPPEPYKGKGVKYADEIVRR 326
           KVEENTRITVSGYDK  +G+FAAS+RKWRPPEPYKGKGVKYADE+VRR
Sbjct: 170 KVEENTRITVSGYDKSEVGQFAASIRKWRPPEPYKGKGVKYADEVVRR 217