BLASTX nr result

ID: Coptis24_contig00010344 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010344
         (1245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279235.2| PREDICTED: dehydrodolichyl diphosphate synth...   349   7e-94
emb|CAN61894.1| hypothetical protein VITISV_028791 [Vitis vinifera]   346   6e-93
emb|CBI15960.3| unnamed protein product [Vitis vinifera]              337   4e-90
ref|XP_002298315.1| predicted protein [Populus trichocarpa] gi|2...   336   8e-90
ref|XP_003544879.1| PREDICTED: dehydrodolichyl diphosphate synth...   334   3e-89

>ref|XP_002279235.2| PREDICTED: dehydrodolichyl diphosphate synthase 2-like [Vitis
           vinifera]
          Length = 311

 Score =  349 bits (896), Expect = 7e-94
 Identities = 176/266 (66%), Positives = 208/266 (78%), Gaps = 3/266 (1%)
 Frame = +3

Query: 195 FPSAILP---KPISAVISGIEELEHEQVERSEELLPVGLERKFMPKHVAVIMDGNVRWAR 365
           FP   +P   K  +A    + E E  +V    E  P GL R+ MP+HVAVIMDGNVRWA+
Sbjct: 36  FPPISVPRFHKLRTAKTDVVGEEEAREVNERAEGFPDGLRRELMPEHVAVIMDGNVRWAQ 95

Query: 366 KNGLAFSSGHEAGVRALRNLIELCCRWGIKVLSVFAFSCDNWNRPKMEVEFLMSLFERGI 545
           K GL  +SGH+AGVR+LR L+ LCC+WGIKVLSVFAFS DNW+R + EV FLMSL ER +
Sbjct: 96  KRGLPAASGHQAGVRSLRELVGLCCKWGIKVLSVFAFSYDNWSRSEGEVGFLMSLIERVV 155

Query: 546 QAEVDNFMREDIRVSVIGDSSKLPNSLKKLIANTEEVTKNNLGLQLIVAVSYSGQYDIVQ 725
           +AE+ NF RE IRVSVIGD SKLP  L+KLI + EE TK N  LQ IVA+SYSGQ DI+Q
Sbjct: 156 KAELPNFGREGIRVSVIGDLSKLPEQLQKLIIDVEETTKENSRLQFIVALSYSGQCDILQ 215

Query: 726 ACQNIAYKVKEGSIEPESINECLIEQELETNCTKFPYPDLLIRTSGELRVSNFLLWQLAY 905
           AC+NI YKVK+G IEPE IN+ LIEQEL+TNCT+FP+PDLLIRTSGELRVSNF+LWQ+AY
Sbjct: 216 ACKNIGYKVKDGLIEPEDINKSLIEQELQTNCTEFPFPDLLIRTSGELRVSNFMLWQIAY 275

Query: 906 TELCFVQSLWPDFGEAEFIEALQSFQ 983
           TELCF  +LWPDFG+ EF+EAL SFQ
Sbjct: 276 TELCFFSTLWPDFGKDEFVEALSSFQ 301


>emb|CAN61894.1| hypothetical protein VITISV_028791 [Vitis vinifera]
          Length = 592

 Score =  346 bits (888), Expect = 6e-93
 Identities = 175/266 (65%), Positives = 207/266 (77%), Gaps = 3/266 (1%)
 Frame = +3

Query: 195 FPSAILP---KPISAVISGIEELEHEQVERSEELLPVGLERKFMPKHVAVIMDGNVRWAR 365
           FP   +P   K  +A    + E E  +V    E  P GL R+ MP+HVAVIMDGNVRWA+
Sbjct: 42  FPPISVPRFHKLRTAKTDVVGEEEAREVNERAEGFPDGLRRELMPEHVAVIMDGNVRWAQ 101

Query: 366 KNGLAFSSGHEAGVRALRNLIELCCRWGIKVLSVFAFSCDNWNRPKMEVEFLMSLFERGI 545
           K GL  +SGH+AGVR+LR L+ LCC+WGIKVLSVFAFS DNW+R + EV FLMSL ER +
Sbjct: 102 KRGLPAASGHQAGVRSLRELVGLCCKWGIKVLSVFAFSYDNWSRSEGEVGFLMSLIERVV 161

Query: 546 QAEVDNFMREDIRVSVIGDSSKLPNSLKKLIANTEEVTKNNLGLQLIVAVSYSGQYDIVQ 725
           +AE+ NF RE IRVSVIGD SKLP  L+KLI + EE TK N  LQ IVA+SYSGQ DI+Q
Sbjct: 162 KAELPNFGREGIRVSVIGDLSKLPEQLQKLIIDVEETTKENSRLQFIVALSYSGQCDILQ 221

Query: 726 ACQNIAYKVKEGSIEPESINECLIEQELETNCTKFPYPDLLIRTSGELRVSNFLLWQLAY 905
           AC+NI  KVK+G IEPE IN+ LIEQEL+TNCT+FP+PDLLIRTSGELRVSNF+LWQ+AY
Sbjct: 222 ACKNIGXKVKDGLIEPEDINKSLIEQELQTNCTEFPFPDLLIRTSGELRVSNFMLWQIAY 281

Query: 906 TELCFVQSLWPDFGEAEFIEALQSFQ 983
           TELCF  +LWPDFG+ EF+EAL SFQ
Sbjct: 282 TELCFFSTLWPDFGKDEFVEALSSFQ 307


>emb|CBI15960.3| unnamed protein product [Vitis vinifera]
          Length = 233

 Score =  337 bits (864), Expect = 4e-90
 Identities = 163/223 (73%), Positives = 190/223 (85%)
 Frame = +3

Query: 315 MPKHVAVIMDGNVRWARKNGLAFSSGHEAGVRALRNLIELCCRWGIKVLSVFAFSCDNWN 494
           MP+HVAVIMDGNVRWA+K GL  +SGH+AGVR+LR L+ LCC+WGIKVLSVFAFS DNW+
Sbjct: 1   MPEHVAVIMDGNVRWAQKRGLPAASGHQAGVRSLRELVGLCCKWGIKVLSVFAFSYDNWS 60

Query: 495 RPKMEVEFLMSLFERGIQAEVDNFMREDIRVSVIGDSSKLPNSLKKLIANTEEVTKNNLG 674
           R + EV FLMSL ER ++AE+ NF RE IRVSVIGD SKLP  L+KLI + EE TK N  
Sbjct: 61  RSEGEVGFLMSLIERVVKAELPNFGREGIRVSVIGDLSKLPEQLQKLIIDVEETTKENSR 120

Query: 675 LQLIVAVSYSGQYDIVQACQNIAYKVKEGSIEPESINECLIEQELETNCTKFPYPDLLIR 854
           LQ IVA+SYSGQ DI+QAC+NI YKVK+G IEPE IN+ LIEQEL+TNCT+FP+PDLLIR
Sbjct: 121 LQFIVALSYSGQCDILQACKNIGYKVKDGLIEPEDINKSLIEQELQTNCTEFPFPDLLIR 180

Query: 855 TSGELRVSNFLLWQLAYTELCFVQSLWPDFGEAEFIEALQSFQ 983
           TSGELRVSNF+LWQ+AYTELCF  +LWPDFG+ EF+EAL SFQ
Sbjct: 181 TSGELRVSNFMLWQIAYTELCFFSTLWPDFGKDEFVEALSSFQ 223


>ref|XP_002298315.1| predicted protein [Populus trichocarpa] gi|222845573|gb|EEE83120.1|
           predicted protein [Populus trichocarpa]
          Length = 242

 Score =  336 bits (861), Expect = 8e-90
 Identities = 161/233 (69%), Positives = 199/233 (85%), Gaps = 1/233 (0%)
 Frame = +3

Query: 288 LPVGLERKFMPKHVAVIMDGNVRWARKNGL-AFSSGHEAGVRALRNLIELCCRWGIKVLS 464
           LP GL R+ MP+HVAVIMDGN +WAR+ G  A S+GHEAG R+LR L++ CC WGI+VL+
Sbjct: 1   LPEGLRREVMPRHVAVIMDGNAKWARQRGFSAASAGHEAGGRSLRELVKSCCEWGIRVLT 60

Query: 465 VFAFSCDNWNRPKMEVEFLMSLFERGIQAEVDNFMREDIRVSVIGDSSKLPNSLKKLIAN 644
           VFAFS DNW RPKMEV FL+SLFER +Q+E+DNFMR+ IRVS IGDSS+LP SLKKLI++
Sbjct: 61  VFAFSYDNWTRPKMEVVFLLSLFERMLQSELDNFMRKGIRVSTIGDSSRLPESLKKLISD 120

Query: 645 TEEVTKNNLGLQLIVAVSYSGQYDIVQACQNIAYKVKEGSIEPESINECLIEQELETNCT 824
            EE T++N  L LI+AVSYSG+YD+ QAC++IA+KVK+G ++ E I+E L+EQELETNC 
Sbjct: 121 IEEKTRDNCRLHLILAVSYSGKYDVTQACKSIAHKVKDGIVQLEDIDESLLEQELETNCA 180

Query: 825 KFPYPDLLIRTSGELRVSNFLLWQLAYTELCFVQSLWPDFGEAEFIEALQSFQ 983
           ++P PDLLIRTSGELR+SNFLLWQLAYTEL F ++LWPDFG+AEFIEAL S+Q
Sbjct: 181 QYPCPDLLIRTSGELRISNFLLWQLAYTELFFAEALWPDFGKAEFIEALTSYQ 233


>ref|XP_003544879.1| PREDICTED: dehydrodolichyl diphosphate synthase 2-like [Glycine
           max]
          Length = 322

 Score =  334 bits (856), Expect = 3e-89
 Identities = 163/238 (68%), Positives = 194/238 (81%)
 Frame = +3

Query: 270 ERSEELLPVGLERKFMPKHVAVIMDGNVRWARKNGLAFSSGHEAGVRALRNLIELCCRWG 449
           + S E LP  L  + MPKHVAVIMDGN RWA+  GL  S+GH+AGV++LR ++ LCC WG
Sbjct: 74  QESLEPLPAELAAEMMPKHVAVIMDGNGRWAKVKGLPPSAGHQAGVQSLRKMVRLCCSWG 133

Query: 450 IKVLSVFAFSCDNWNRPKMEVEFLMSLFERGIQAEVDNFMREDIRVSVIGDSSKLPNSLK 629
           IKVL+VFAFS DNW RPK+EV+FLM LFER I +EV  F RE IR+SVIGDSS+LP SLK
Sbjct: 134 IKVLTVFAFSTDNWVRPKVEVDFLMRLFERTINSEVQTFKREGIRISVIGDSSRLPESLK 193

Query: 630 KLIANTEEVTKNNLGLQLIVAVSYSGQYDIVQACQNIAYKVKEGSIEPESINECLIEQEL 809
           ++IA+ EE TK N   QLIVAV YSG+YD+VQAC+++A KVK+G I  + INE +IEQEL
Sbjct: 194 RMIASAEEDTKQNSRFQLIVAVGYSGKYDVVQACKSVAKKVKDGHIHLDDINENIIEQEL 253

Query: 810 ETNCTKFPYPDLLIRTSGELRVSNFLLWQLAYTELCFVQSLWPDFGEAEFIEALQSFQ 983
           ETNCT+FPYPDLLIRTSGELRVSNFLLWQLAYTEL F + LWPDFG+ EF++AL SFQ
Sbjct: 254 ETNCTEFPYPDLLIRTSGELRVSNFLLWQLAYTELYFNRELWPDFGKDEFVDALSSFQ 311


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