BLASTX nr result

ID: Coptis24_contig00010339 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010339
         (1124 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279131.1| PREDICTED: uncharacterized protein LOC100255...   230   4e-58
ref|XP_004148501.1| PREDICTED: dnaJ homolog subfamily C member 2...   223   5e-56
ref|XP_003525111.1| PREDICTED: uncharacterized protein LOC100780...   212   1e-52
ref|XP_002528771.1| DNA binding protein, putative [Ricinus commu...   212   1e-52
gb|AFK36125.1| unknown [Medicago truncatula]                          205   2e-50

>ref|XP_002279131.1| PREDICTED: uncharacterized protein LOC100255727 [Vitis vinifera]
          Length = 299

 Score =  230 bits (587), Expect = 4e-58
 Identities = 138/305 (45%), Positives = 173/305 (56%), Gaps = 6/305 (1%)
 Frame = +2

Query: 35  MEFLDEESRPKLLFQSRFSSNPSPT---PQKINKPXXXXXXXXXXXXXXXXXXXXXXXXX 205
           MEFLDEESRP+ +FQS  + +P+ T   PQ +NKP                         
Sbjct: 1   MEFLDEESRPRFVFQSGSNHSPASTHLHPQPLNKP-LIFISLSLSSILISLSVFFLQSEP 59

Query: 206 XXHLLLWFSISLFLGPFAPVSITGGDVRVGQGEILEEP---VEFDEHLKKQTVPSRRKFR 376
              LLLWF++SL +GPFAP  +T GD+RVG+G ILE P    + DE  K+     R + R
Sbjct: 60  LKSLLLWFALSLLVGPFAPSHLTAGDIRVGRGPILEFPSQEKDSDELNKRPPSNRRPRLR 119

Query: 377 KPEELVTPGLVIEKKEEVGGDCNGEKVGXXXXXXXXXXXXXWTDGDFDMLKKQIGKYPIG 556
           K E       V    E   G    EK               W DGD ++LKKQ+ K+P+G
Sbjct: 120 KVETATFTSPVATSVEGDNGLARVEK-----RSEATAEESEWVDGDVEILKKQLLKHPVG 174

Query: 557 TVRRWEMIAQVFKGRHGVESVIKMGKSWNEKKPGGGDSFTQFLKQRKPLDKRMXXXXXXX 736
              RWE +A+ F+GRHGVESVI+  KS  E+K    DSF +FLK RKP+DKR+       
Sbjct: 175 MPGRWEAVAEAFRGRHGVESVIRKAKSLGERKSSDSDSFNRFLKDRKPVDKRV-EDGMAM 233

Query: 737 XXXXXXXXXXXXXIALLNALKAFPKDVSMRWEKIAAAVPSKTKASCVKRVAELKKGFRSS 916
                        IALLNALKAFPKDV MRWEKIAAAVP ++KA+C+KR +ELKKGFR+S
Sbjct: 234 ENDEKEGWSSGEDIALLNALKAFPKDVPMRWEKIAAAVPGRSKAACMKRFSELKKGFRNS 293

Query: 917 KASAE 931
           KA+AE
Sbjct: 294 KAAAE 298


>ref|XP_004148501.1| PREDICTED: dnaJ homolog subfamily C member 2-like [Cucumis sativus]
           gi|449510794|ref|XP_004163760.1| PREDICTED: dnaJ homolog
           subfamily C member 2-like [Cucumis sativus]
          Length = 309

 Score =  223 bits (569), Expect = 5e-56
 Identities = 135/309 (43%), Positives = 173/309 (55%), Gaps = 10/309 (3%)
 Frame = +2

Query: 35  MEFLDEESRPKLLFQSRFSSNPSPTPQKINKPXXXXXXXXXXXXXXXXXXXXXXXXXXXH 214
           MEFLDE+++P+ LF SR +++P+   Q  +                              
Sbjct: 1   MEFLDEDAKPRFLFHSRANTSPAMELQSDSHSTKLFLSITLLISSIFLILSIVFVQFEPF 60

Query: 215 --LLLWFSISLFLGPFAPVSITGGDVRVGQGEILEEP---VEFDEHLKKQTVPSRRKFRK 379
             LL+W S+SL LGPFAP+S+TGGD+RVG+G ILE P    E ++  KK+ V  R K R+
Sbjct: 61  RSLLIWLSLSLLLGPFAPISLTGGDIRVGRGPILEIPDDEPEVEDDSKKKPVQKRSKPRR 120

Query: 380 P-EELVTPGLVIEKKEEVGGDCNGEKVGXXXXXXXXXXXXX---WTDGDFDMLKKQIGKY 547
             +E+    + + +K     D N   VG                W D +   LKKQ+ K+
Sbjct: 121 STDEIAVASIEVAEKSSAKID-NRNGVGHRSSKNGVDFAIEEAEWDDAELGFLKKQLAKH 179

Query: 548 PIGTVRRWEMIAQVFKGRHGVESVIKMGKSWNEKKPGGGDSFTQFLKQRKPLDKRM-XXX 724
           P+G  RRWE+IA+ F GRH VE+VIKM K   EKK G  DS+ QFLK RKP+DKR+    
Sbjct: 180 PVGKPRRWEIIAEAFGGRHKVENVIKMAKEMGEKKLGDEDSYAQFLKNRKPMDKRIENVN 239

Query: 725 XXXXXXXXXXXXXXXXXIALLNALKAFPKDVSMRWEKIAAAVPSKTKASCVKRVAELKKG 904
                            IALLNALKAFPKD +MRWEKIAAAVP KTKA+C+KRV ELKK 
Sbjct: 240 EEATTAAVAGGWSSGEDIALLNALKAFPKDSAMRWEKIAAAVPGKTKAACMKRVGELKKD 299

Query: 905 FRSSKASAE 931
           FR+SKA  E
Sbjct: 300 FRNSKAGNE 308


>ref|XP_003525111.1| PREDICTED: uncharacterized protein LOC100780658 [Glycine max]
          Length = 303

 Score =  212 bits (540), Expect = 1e-52
 Identities = 129/308 (41%), Positives = 171/308 (55%), Gaps = 9/308 (2%)
 Frame = +2

Query: 35  MEFLDEESRPKLLFQSRFSSNPSPTPQKINKP--XXXXXXXXXXXXXXXXXXXXXXXXXX 208
           MEFLDE++RP+ +FQS  ++  S  P  I+KP                            
Sbjct: 1   MEFLDEDARPRFVFQSGAAARSSEPPHPIHKPTKPFLFATVSLSSLFLTLSLFFLEAEPF 60

Query: 209 XHLLLWFSISLFLGPFAPVSITGGDVRVGQGEILEEP---VEFDEHLKKQTVPSRRKFRK 379
             LL W ++SL +GPFAP SITGGDVRVG+GE++  P    E DE   +++   R + R+
Sbjct: 61  KSLLFWLALSLLVGPFAPPSITGGDVRVGRGEVVNFPDPEPEPDEDASRKSSQRRSRQRR 120

Query: 380 PEE---LVTPGLVIEKKEEVGGDCNGEKVGXXXXXXXXXXXXXWTDGDFDMLKKQIGKYP 550
            EE    V P + +   E+       E  G             W++ D ++LKKQ+ K P
Sbjct: 121 AEEASAAVGPVVSVSAAEK-----RKESSGIEKRATVVEEEKGWSEEDVEVLKKQMVKNP 175

Query: 551 IGTVRRWEMIAQVFKGRHGVESVIKMGKSWNEKKPGGGDSFTQFLKQRKPLDKR-MXXXX 727
           +G   RWE IA  F GRHGV+SVIK  K   EK+    +S+  FLK+RK LDKR +    
Sbjct: 176 VGKPGRWEAIAAAFGGRHGVDSVIKKAKELGEKRVDDSESYALFLKKRKALDKRVVEENA 235

Query: 728 XXXXXXXXXXXXXXXXIALLNALKAFPKDVSMRWEKIAAAVPSKTKASCVKRVAELKKGF 907
                           IALLNALKAFPK+VSMRWEK+AAAVP ++KA+C+KR AELKKGF
Sbjct: 236 DEGEKVVDNGWSSAEDIALLNALKAFPKEVSMRWEKVAAAVPGRSKAACMKRFAELKKGF 295

Query: 908 RSSKASAE 931
           R++KA+AE
Sbjct: 296 RTAKAAAE 303


>ref|XP_002528771.1| DNA binding protein, putative [Ricinus communis]
           gi|223531774|gb|EEF33593.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 315

 Score =  212 bits (540), Expect = 1e-52
 Identities = 136/317 (42%), Positives = 169/317 (53%), Gaps = 18/317 (5%)
 Frame = +2

Query: 35  MEFLDEESRPKLLFQSR---FSSNPSPTPQK-INKPXXXXXXXXXXXXXXXXXXXXXXXX 202
           MEF+DE++RP+ +FQSR    S     T QK +NKP                        
Sbjct: 1   MEFIDEDARPRFVFQSRPLPSSLTNQQTQQKPLNKPLIIFTVFLSSFLFVLSILYIQTEP 60

Query: 203 XXXHLLLWFSISLFLGPFAPVSITGGDVRVGQGEILEEPVEFDEHLKKQTVPSRR--KFR 376
               LL W SIS  +GPFAP  ITGGD+RVGQG I E   E  E +  + VP +R  + R
Sbjct: 61  FKS-LLFWVSISFIVGPFAPSHITGGDIRVGQGPIFEPLEEEPETVNDKRVPKKRSKQIR 119

Query: 377 KPEELVTPGLVIEKKEEVGGDCNGEKVGXXXXXXXXXXXXX----WTDGDFDMLKKQIGK 544
             E ++    V+E     G      K+                  W + D ++LKKQ+ K
Sbjct: 120 SEETVMGSAPVVETTN--GLSIKERKIEPLTKSENWVVANEVEKEWNEEDLEILKKQMVK 177

Query: 545 YPIGTVRRWEMIAQVFKGRHGVESVIKMGKSWNEKKPGGGDSFTQFLKQRKPLDKRM--- 715
            P+G  RRWE+IA+ FKGRH VESVIKM K   E+K    DS+ +FLK RKPLD R    
Sbjct: 178 NPVGKPRRWEVIAEAFKGRHKVESVIKMAKEMGERKLDDNDSYARFLKNRKPLDTRAQAE 237

Query: 716 -----XXXXXXXXXXXXXXXXXXXXIALLNALKAFPKDVSMRWEKIAAAVPSKTKASCVK 880
                                    IALLNALKAFPKD+ MRWEKIAAAVP+K+KA+C+K
Sbjct: 238 ISGIESGAEARKDNDGGVGWNAVEDIALLNALKAFPKDIPMRWEKIAAAVPTKSKAACMK 297

Query: 881 RVAELKKGFRSSKASAE 931
           R+AELKK FRSSKA+AE
Sbjct: 298 RIAELKKDFRSSKAAAE 314


>gb|AFK36125.1| unknown [Medicago truncatula]
          Length = 303

 Score =  205 bits (521), Expect = 2e-50
 Identities = 124/308 (40%), Positives = 166/308 (53%), Gaps = 9/308 (2%)
 Frame = +2

Query: 35  MEFLDEESRPKLLFQSRFSSNPSPTPQKINKPXXXXXXXXXXXXXXXXXXXXXXXXXXXH 214
           MEFLDE+++PK L+QS   +     P +                                
Sbjct: 1   MEFLDEDAKPKFLYQSGAPAATESQPYQKPTKSFIAVTFSISSIFFGLAFFVFQSEPLKS 60

Query: 215 LLLWFSISLFLGPFAPVSITGGDVRVGQGEILEEPVEF----DEHLKKQTVPSRRKFRKP 382
           + +WF++SL LGPFAP+SITGGD RVG+G  +  P +     ++  +K++   R K R+ 
Sbjct: 61  IFIWFALSLLLGPFAPISITGGDSRVGRGHAVNFPDQETSTDEDDSRKKSQQRRSKQRRS 120

Query: 383 EEL---VTPGLVIEKKEEVGGDCNGEKVGXXXXXXXXXXXXXWTDGDFDMLKKQIGKYPI 553
           +++   V P  V+  K   G   NG  V              W + D ++LKKQ+ K P 
Sbjct: 121 DDVTAVVAPAPVVSLKNRNG---NGNGVALAAVVEEEKE---WNEDDIEILKKQMVKNPP 174

Query: 554 GTVRRWEMIAQVFKGRHGVESVIKMGKSWNEKKPGGGDSFTQFLKQRKPLDKRMXXXXXX 733
           G   RWE IA+ F GRH  ESV+K  K   EKK    DS+ QFLK+RK LDKR+      
Sbjct: 175 GKPGRWEAIAEAFGGRHKAESVVKKSKELGEKKVDDSDSYEQFLKKRKALDKRLVEERGD 234

Query: 734 XXXXXXXXXXXXXX--IALLNALKAFPKDVSMRWEKIAAAVPSKTKASCVKRVAELKKGF 907
                           IALLNALKAFPKDV+MRWEK+AAAVP K+KA+C+KR+AELKKGF
Sbjct: 235 LATVEKVESVWSSNEDIALLNALKAFPKDVAMRWEKVAAAVPGKSKAACMKRIAELKKGF 294

Query: 908 RSSKASAE 931
           R+SK+ +E
Sbjct: 295 RTSKSGSE 302


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