BLASTX nr result

ID: Coptis24_contig00010326 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010326
         (1443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263667.1| PREDICTED: methyltransferase-like protein 17...   435   e-119
ref|XP_004161453.1| PREDICTED: methyltransferase-like protein 17...   409   e-112
ref|XP_004143852.1| PREDICTED: methyltransferase-like protein 17...   408   e-111
ref|XP_002299443.1| predicted protein [Populus trichocarpa] gi|2...   405   e-110
ref|XP_002518877.1| cytochrome C oxidase assembly protein cox11,...   402   e-109

>ref|XP_002263667.1| PREDICTED: methyltransferase-like protein 17, mitochondrial [Vitis
            vinifera] gi|297742403|emb|CBI34552.3| unnamed protein
            product [Vitis vinifera]
          Length = 585

 Score =  435 bits (1119), Expect = e-119
 Identities = 215/278 (77%), Positives = 248/278 (89%)
 Frame = -1

Query: 1203 KMASQIPETARKIFTTETLATAAKQSVGCHIVPVCLRRAIKRFLRENETPNLKRKVLSLS 1024
            +MA+ +PETA++IFT E L +AAKQS  CHIVPV LRRAIK+FLRE E P++KRKVL LS
Sbjct: 75   EMAALVPETAQRIFTPEALRSAAKQSERCHIVPVRLRRAIKKFLREQEEPHMKRKVLRLS 134

Query: 1023 QSFNKMKDANLLLTASTSRELVEDPFKAIERSKRWKIKSAYGDIGFKYRDDQTIAYVASR 844
            +SF ++KD NLLLTASTSRELVEDP K++ERSKRWKIKSAYGDIG KYRDD+T+AYVASR
Sbjct: 135  ESFCEIKDVNLLLTASTSRELVEDPLKSMERSKRWKIKSAYGDIGLKYRDDETVAYVASR 194

Query: 843  MPAVYSACHRVLKEVKRRLPGFAPKSVLDFGSGTGSVLWAIREVWPHSLESINLVEPSKY 664
            MPAVYSAC+RVL EV+RRLPGF+P  VLDFGSGTGS LWA+REVWP +LE INLVEPSK 
Sbjct: 195  MPAVYSACYRVLSEVRRRLPGFSPAGVLDFGSGTGSALWALREVWPRTLERINLVEPSKS 254

Query: 663  MQRVAQSLLHGLKDLPLIHSYDSIQALMKNLDKSDMEHDLVMASYVLGEVASLKDRITIV 484
            MQRV+QSL+   K+LPLIHSYDSIQAL +N+ KS+ EHDLV+ASYVLGE+ SLKDRITIV
Sbjct: 255  MQRVSQSLIQDQKNLPLIHSYDSIQALTQNISKSEREHDLVIASYVLGEIPSLKDRITIV 314

Query: 483  RQLWNLTQDVLVLVEPGTPRGYKIIAQMRSHILWMEKR 370
            RQLW+LT+DVLVLVEPGTP+G  II+QMRSHILWMEKR
Sbjct: 315  RQLWDLTRDVLVLVEPGTPQGSNIISQMRSHILWMEKR 352


>ref|XP_004161453.1| PREDICTED: methyltransferase-like protein 17, mitochondrial-like
            [Cucumis sativus]
          Length = 508

 Score =  409 bits (1052), Expect = e-112
 Identities = 199/284 (70%), Positives = 243/284 (85%)
 Frame = -1

Query: 1200 MASQIPETARKIFTTETLATAAKQSVGCHIVPVCLRRAIKRFLRENETPNLKRKVLSLSQ 1021
            MAS + ET++K+ T E L +AAKQS GC +VPV LRRAIK++LR++E  +LKRKVL LSQ
Sbjct: 1    MASLLQETSQKVLTPEILRSAAKQSQGCLVVPVRLRRAIKKYLRDHEVSHLKRKVLRLSQ 60

Query: 1020 SFNKMKDANLLLTASTSRELVEDPFKAIERSKRWKIKSAYGDIGFKYRDDQTIAYVASRM 841
            SF+ +KD NL L A+TS+ELVEDP K++E+SKRWKIKS YGDIGF+Y DD+TIAYVASRM
Sbjct: 61   SFSGIKDVNLQLAAATSKELVEDPLKSVEQSKRWKIKSVYGDIGFQYTDDETIAYVASRM 120

Query: 840  PAVYSACHRVLKEVKRRLPGFAPKSVLDFGSGTGSVLWAIREVWPHSLESINLVEPSKYM 661
            PAV+SAC+RVL EV+RRLP F+P SVLDFG+GTGS  WA+REVWPHS++ +N+VEPS+ M
Sbjct: 121  PAVFSACYRVLNEVRRRLPDFSPTSVLDFGAGTGSGFWALREVWPHSIQKVNIVEPSQSM 180

Query: 660  QRVAQSLLHGLKDLPLIHSYDSIQALMKNLDKSDMEHDLVMASYVLGEVASLKDRITIVR 481
            QR  QSL+ GLK+LPLIH YDSIQ+L K++ KS+ EHDLV+ASYVLGE+ SL+DR+TIVR
Sbjct: 181  QRAGQSLIQGLKNLPLIHGYDSIQSLNKDISKSEREHDLVIASYVLGEIPSLQDRVTIVR 240

Query: 480  QLWNLTQDVLVLVEPGTPRGYKIIAQMRSHILWMEKRICLINSN 349
            QLWNLT+DVLVLVEPGTP+G  II+QMRSHILWMEKR    N N
Sbjct: 241  QLWNLTKDVLVLVEPGTPQGSNIISQMRSHILWMEKRKWKKNEN 284


>ref|XP_004143852.1| PREDICTED: methyltransferase-like protein 17, mitochondrial-like
            [Cucumis sativus]
          Length = 508

 Score =  408 bits (1048), Expect = e-111
 Identities = 198/284 (69%), Positives = 243/284 (85%)
 Frame = -1

Query: 1200 MASQIPETARKIFTTETLATAAKQSVGCHIVPVCLRRAIKRFLRENETPNLKRKVLSLSQ 1021
            MAS + E+++K+ T E L +AAKQS GC +VPV LRRAIK++LR++E  +LKRKVL LSQ
Sbjct: 1    MASLLQESSQKVLTPEILRSAAKQSQGCLVVPVRLRRAIKKYLRDHEVSHLKRKVLRLSQ 60

Query: 1020 SFNKMKDANLLLTASTSRELVEDPFKAIERSKRWKIKSAYGDIGFKYRDDQTIAYVASRM 841
            SF+ +KD NL L A+TS+ELVEDP K++E+SKRWKIKS YGDIGF+Y DD+TIAYVASRM
Sbjct: 61   SFSGIKDVNLQLAAATSKELVEDPLKSVEQSKRWKIKSVYGDIGFQYTDDETIAYVASRM 120

Query: 840  PAVYSACHRVLKEVKRRLPGFAPKSVLDFGSGTGSVLWAIREVWPHSLESINLVEPSKYM 661
            PAV+SAC+RVL EV+RRLP F+P SVLDFG+GTGS  WA+REVWPHS++ +N+VEPS+ M
Sbjct: 121  PAVFSACYRVLNEVRRRLPDFSPTSVLDFGAGTGSGFWALREVWPHSIQKVNIVEPSQSM 180

Query: 660  QRVAQSLLHGLKDLPLIHSYDSIQALMKNLDKSDMEHDLVMASYVLGEVASLKDRITIVR 481
            QR  QSL+ GLK+LPLIH YDSIQ+L K++ KS+ EHDLV+ASYVLGE+ SL+DR+TIVR
Sbjct: 181  QRAGQSLIQGLKNLPLIHGYDSIQSLNKDISKSEREHDLVIASYVLGEIPSLQDRVTIVR 240

Query: 480  QLWNLTQDVLVLVEPGTPRGYKIIAQMRSHILWMEKRICLINSN 349
            QLWNLT+DVLVLVEPGTP+G  II+QMRSHILWMEKR    N N
Sbjct: 241  QLWNLTKDVLVLVEPGTPQGSNIISQMRSHILWMEKRKWKKNEN 284


>ref|XP_002299443.1| predicted protein [Populus trichocarpa] gi|222846701|gb|EEE84248.1|
            predicted protein [Populus trichocarpa]
          Length = 471

 Score =  405 bits (1040), Expect = e-110
 Identities = 196/278 (70%), Positives = 237/278 (85%)
 Frame = -1

Query: 1197 ASQIPETARKIFTTETLATAAKQSVGCHIVPVCLRRAIKRFLRENETPNLKRKVLSLSQS 1018
            AS IPET +K+FT E L +A KQS  C IVPV LRRAIK++LRE E P++K+KVL LS+S
Sbjct: 1    ASLIPETTKKLFTAENLRSATKQSDRCLIVPVRLRRAIKKYLREQEEPHMKKKVLRLSES 60

Query: 1017 FNKMKDANLLLTASTSRELVEDPFKAIERSKRWKIKSAYGDIGFKYRDDQTIAYVASRMP 838
            F+ +KD N++L  +TS+ELVEDPFK++ERSKRWKIKS+YGDIG  YRDD+TIAYVASRMP
Sbjct: 61   FSDIKDKNMMLAINTSKELVEDPFKSMERSKRWKIKSSYGDIGLSYRDDETIAYVASRMP 120

Query: 837  AVYSACHRVLKEVKRRLPGFAPKSVLDFGSGTGSVLWAIREVWPHSLESINLVEPSKYMQ 658
            AV+SAC+RVL EV+RRLPGF+P  +LDFG+GTGS  WAIREVWP SL+ +NLVEPS+ MQ
Sbjct: 121  AVFSACYRVLSEVRRRLPGFSPTKILDFGAGTGSAFWAIREVWPKSLQKVNLVEPSQSMQ 180

Query: 657  RVAQSLLHGLKDLPLIHSYDSIQALMKNLDKSDMEHDLVMASYVLGEVASLKDRITIVRQ 478
            R  +SL+  LK+LPLIHSY+S+Q L K++ KS+ +HDLV+ASYVLGE+ SLKDRITIVRQ
Sbjct: 181  RAGRSLIQDLKNLPLIHSYNSLQDLSKSIRKSERKHDLVIASYVLGEIPSLKDRITIVRQ 240

Query: 477  LWNLTQDVLVLVEPGTPRGYKIIAQMRSHILWMEKRIC 364
            LW LT DVLVLVEPGTP G+ II+QMRSHILWMEKR C
Sbjct: 241  LWELTGDVLVLVEPGTPHGFGIISQMRSHILWMEKRKC 278


>ref|XP_002518877.1| cytochrome C oxidase assembly protein cox11, putative [Ricinus
            communis] gi|223541864|gb|EEF43410.1| cytochrome C
            oxidase assembly protein cox11, putative [Ricinus
            communis]
          Length = 501

 Score =  402 bits (1033), Expect = e-109
 Identities = 193/268 (72%), Positives = 231/268 (86%)
 Frame = -1

Query: 1173 RKIFTTETLATAAKQSVGCHIVPVCLRRAIKRFLRENETPNLKRKVLSLSQSFNKMKDAN 994
            ++I T E L +AAKQS GC +VPV LRRAIKR+LRE E P++KRKVL LS+SF+++KD N
Sbjct: 4    QRILTPEALRSAAKQSQGCLVVPVTLRRAIKRYLREQEEPHMKRKVLRLSESFSEIKDVN 63

Query: 993  LLLTASTSRELVEDPFKAIERSKRWKIKSAYGDIGFKYRDDQTIAYVASRMPAVYSACHR 814
            L+LTA+TS+ELVEDPFK++ERSKRWKI+S YGD+G KY DD+T+AYVASRMPAV+SAC+R
Sbjct: 64   LMLTATTSKELVEDPFKSMERSKRWKIRSCYGDVGLKYTDDETVAYVASRMPAVFSACYR 123

Query: 813  VLKEVKRRLPGFAPKSVLDFGSGTGSVLWAIREVWPHSLESINLVEPSKYMQRVAQSLLH 634
            +L EVKRRLPGF+P  VLDFG+GTGS  WA+R+VWP S+E +NLVEPS  MQR  +SL+ 
Sbjct: 124  ILSEVKRRLPGFSPTKVLDFGAGTGSAFWAMRQVWPKSVEKVNLVEPSPSMQRAGRSLIQ 183

Query: 633  GLKDLPLIHSYDSIQALMKNLDKSDMEHDLVMASYVLGEVASLKDRITIVRQLWNLTQDV 454
             LKDLPLIH Y+SIQAL K + KS+ EHDLV+ASYVLGE+ SLKDRITIVRQLW+LT DV
Sbjct: 184  DLKDLPLIHGYNSIQALSKTISKSEREHDLVIASYVLGEIPSLKDRITIVRQLWDLTGDV 243

Query: 453  LVLVEPGTPRGYKIIAQMRSHILWMEKR 370
            LVLVEPGTP G  II+QMRSHILWMEKR
Sbjct: 244  LVLVEPGTPHGSNIISQMRSHILWMEKR 271


Top