BLASTX nr result

ID: Coptis24_contig00010313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010313
         (1519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327441.1| predicted protein [Populus trichocarpa] gi|2...   436   e-119
ref|XP_002276942.1| PREDICTED: 5'-nucleotidase surE [Vitis vinif...   434   e-119
gb|ABK94047.1| unknown [Populus trichocarpa]                          434   e-119
ref|XP_002329066.1| predicted protein [Populus trichocarpa] gi|2...   423   e-116
ref|XP_004146815.1| PREDICTED: 5'-nucleotidase SurE-like [Cucumi...   415   e-113

>ref|XP_002327441.1| predicted protein [Populus trichocarpa] gi|222835995|gb|EEE74416.1|
            predicted protein [Populus trichocarpa]
          Length = 390

 Score =  436 bits (1120), Expect = e-119
 Identities = 233/355 (65%), Positives = 257/355 (72%), Gaps = 19/355 (5%)
 Frame = +2

Query: 56   NNLLPASLVSNLQEVLINRKAXXXXXXXXXXXXXXXXXXXXXX----------------- 184
            NNLLP  LVSNLQ+VL++RK                                        
Sbjct: 6    NNLLPPGLVSNLQQVLLSRKGGGGGEEKGSDLSNDDNDQSTESSTSACVENTEEEDNNNS 65

Query: 185  KPVVLVTNGDGIDATGLTVLVQALVGLGLFNVHVCAPQSDRSVSGHSMTPFETLMVSPVE 364
            KPVVLVTNGDGID+ GL  LV+ALV  GL NVHVCAPQSD+SVS HS+T  ET+  +  E
Sbjct: 66   KPVVLVTNGDGIDSPGLLFLVEALVREGLCNVHVCAPQSDKSVSSHSVTLQETIAATSAE 125

Query: 365  ISGATAYEVSGTPADCVSLALSGALFSWSKPALVISGINRGSGCGLQMFYSGTAAGAREA 544
            I+GA AYE+SGTP DCVSLALSGALFSWSKP LVISGINRGS CG  MFYSG  AGAREA
Sbjct: 126  INGAVAYEISGTPVDCVSLALSGALFSWSKPLLVISGINRGSNCGYHMFYSGVVAGAREA 185

Query: 545  LICGVPSFSISLNWKKNESHESDFKDAVDVCLPLIQAAIGDIEKGVFPKSCSINIEIPTS 724
            LICGVPS SISLNWKK+ES +SDFKDAV VCLP+I AAI DIEKG FP+SCS+NIEIPTS
Sbjct: 186  LICGVPSLSISLNWKKDESQDSDFKDAVAVCLPVINAAIRDIEKGFFPQSCSLNIEIPTS 245

Query: 725  PLKNKGFKVTRKSLWRSPPCWQAVAANRHTPGGNFMSNQQSLGIQLXXXXXXXXXXXXXX 904
            P  NKGFK+TR+S+WRS P WQAV+ANRH   G+FMSNQQSLG+QL              
Sbjct: 246  PSTNKGFKLTRRSMWRSSPSWQAVSANRHPSAGHFMSNQQSLGLQLAQLSRDASAAGAAR 305

Query: 905  XXNTQKKN-VEIESVGAAGKSD-QRVKKYFRLEFLDKEQEDMDEDLDFRALENEF 1063
               TQ+KN VEIESVGAAGKSD  RVKKYFR+EFLDKEQED DEDLDFRALEN F
Sbjct: 306  RLTTQRKNMVEIESVGAAGKSDSNRVKKYFRMEFLDKEQEDTDEDLDFRALENGF 360


>ref|XP_002276942.1| PREDICTED: 5'-nucleotidase surE [Vitis vinifera]
            gi|297743037|emb|CBI35904.3| unnamed protein product
            [Vitis vinifera]
          Length = 384

 Score =  434 bits (1117), Expect = e-119
 Identities = 237/352 (67%), Positives = 256/352 (72%), Gaps = 11/352 (3%)
 Frame = +2

Query: 41   TLMKNNNLLPASLVSNLQEVLINRK---------AXXXXXXXXXXXXXXXXXXXXXXKPV 193
            T    NN LP  LVSNLQEVL+NRK         +                      KPV
Sbjct: 2    TTSVKNNFLPPGLVSNLQEVLLNRKGGSENDPSKSNDESTQPSSSDAVEANSDTECSKPV 61

Query: 194  VLVTNGDGIDATGLTVLVQALVGLGLFNVHVCAPQSDRSVSGHSMTPFETLMVSPVEISG 373
            VLVTN DGI+A GL  LV+ALV  GL NVHVCAPQSD+SVSGHS+T  ET+ V+  EI+G
Sbjct: 62   VLVTNADGIEAPGLNFLVEALVRDGLCNVHVCAPQSDKSVSGHSVTLRETVAVTSAEING 121

Query: 374  ATAYEVSGTPADCVSLALSGALFSWSKPALVISGINRGSGCGLQMFYSGTAAGAREALIC 553
            ATAYEVSGTP DCVSLALSGALFSWSKP LVISGINRGS CG  MFYSG  AGAREAL C
Sbjct: 122  ATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHMFYSGVVAGAREALFC 181

Query: 554  GVPSFSISLNWKKNESHESDFKDAVDVCLPLIQAAIGDIEKGVFPKSCSINIEIPTSPLK 733
            GVPS SISLNWKK+ES ESDFKDAV VCLPLI AAI DIEKGVFPKSC +NIEIP SPL 
Sbjct: 182  GVPSMSISLNWKKDESQESDFKDAVTVCLPLINAAIRDIEKGVFPKSCLLNIEIPASPLT 241

Query: 734  NKGFKVTRKSLWRSPPCWQAVAANRHTPGGNFMSNQQSLGIQLXXXXXXXXXXXXXXXXN 913
            NKGFK+T++SLWRS P WQAV+ NRH  G  FMSNQQSLGIQL                 
Sbjct: 242  NKGFKLTKQSLWRSTPSWQAVSTNRHPAG--FMSNQQSLGIQLAQLSRDASAAGAARRLT 299

Query: 914  TQKKNVEI-ESVGAAGKSD-QRVKKYFRLEFLDKEQEDMDEDLDFRALENEF 1063
            TQ+KNVEI ESVG AGK+D  RVKKYFRLEF+DKEQE +DEDLDFRALEN F
Sbjct: 300  TQRKNVEIVESVGVAGKTDFNRVKKYFRLEFVDKEQEGLDEDLDFRALENGF 351


>gb|ABK94047.1| unknown [Populus trichocarpa]
          Length = 394

 Score =  434 bits (1115), Expect = e-119
 Identities = 231/361 (63%), Positives = 258/361 (71%), Gaps = 20/361 (5%)
 Frame = +2

Query: 41   TLMKNNNLLPASLVSNLQEVLINRKAXXXXXXXXXXXXXXXXXXXXXX------------ 184
            T +KNNN+LP  LVSNLQ+VL++RK                                   
Sbjct: 2    TSVKNNNMLPPGLVSNLQQVLLSRKGGGGEEEEKKEIDPSNDGNDKSAEPSTTTCVENTE 61

Query: 185  ------KPVVLVTNGDGIDATGLTVLVQALVGLGLFNVHVCAPQSDRSVSGHSMTPFETL 346
                  KP+VLVTNGDGID+ GL  LV+ALV  GL+NVHVCAPQSD+SVS HS+T  E +
Sbjct: 62   EDSNNSKPIVLVTNGDGIDSPGLVSLVEALVREGLYNVHVCAPQSDKSVSSHSVTLHEAI 121

Query: 347  MVSPVEISGATAYEVSGTPADCVSLALSGALFSWSKPALVISGINRGSGCGLQMFYSGTA 526
             V+ VEI+GA AYEVSGTP DCVSLALSGALFSWSKP LVISGINRGS CG  M YSG  
Sbjct: 122  AVTSVEINGAIAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSNCGHHMIYSGVV 181

Query: 527  AGAREALICGVPSFSISLNWKKNESHESDFKDAVDVCLPLIQAAIGDIEKGVFPKSCSIN 706
            AGAREAL CGVPS SISLNWKK ES ESDFKDAV VCLP+I AAI DIEKG FPKSCS+N
Sbjct: 182  AGAREALFCGVPSLSISLNWKKEESQESDFKDAVAVCLPVINAAIRDIEKGFFPKSCSLN 241

Query: 707  IEIPTSPLKNKGFKVTRKSLWRSPPCWQAVAANRHTPGGNFMSNQQSLGIQLXXXXXXXX 886
            IEIPTSP  NKGFK+T++S+WRS P WQAV+ANRH   G+FMSNQQSLG+QL        
Sbjct: 242  IEIPTSPSANKGFKLTKRSMWRSSPSWQAVSANRHPSAGHFMSNQQSLGLQLAQLSRDAS 301

Query: 887  XXXXXXXXNTQKKN-VEIESVGAAGKSD-QRVKKYFRLEFLDKEQEDMDEDLDFRALENE 1060
                     TQ+KN +EIESVGA GKSD  RVKKYFR+EFLDKE ED DEDLDFRA+EN 
Sbjct: 302  AAGAARRLTTQRKNMLEIESVGAGGKSDSNRVKKYFRMEFLDKELEDTDEDLDFRAVENG 361

Query: 1061 F 1063
            F
Sbjct: 362  F 362


>ref|XP_002329066.1| predicted protein [Populus trichocarpa] gi|222839737|gb|EEE78060.1|
            predicted protein [Populus trichocarpa]
          Length = 386

 Score =  423 bits (1088), Expect = e-116
 Identities = 226/354 (63%), Positives = 252/354 (71%), Gaps = 20/354 (5%)
 Frame = +2

Query: 62   LLPASLVSNLQEVLINRKAXXXXXXXXXXXXXXXXXXXXXX------------------K 187
            +LP  LVSNLQ+VL++RK                                         K
Sbjct: 1    MLPPGLVSNLQQVLLSRKGGGGEEEEKKEIDPSNDGNDKSAEPSTSTCVENTEEDSNNSK 60

Query: 188  PVVLVTNGDGIDATGLTVLVQALVGLGLFNVHVCAPQSDRSVSGHSMTPFETLMVSPVEI 367
            P+VLVTNGDGID+ GL  LV+ALV  GL+NVHVCAPQSD+SVS HS+T  E + V+ VEI
Sbjct: 61   PIVLVTNGDGIDSPGLVSLVEALVREGLYNVHVCAPQSDKSVSSHSVTLHEAIAVTSVEI 120

Query: 368  SGATAYEVSGTPADCVSLALSGALFSWSKPALVISGINRGSGCGLQMFYSGTAAGAREAL 547
            +GA AYEVSGTP DCVSLALSGALFSWSKP LVISGINRGS CG  M YSG  AGAREAL
Sbjct: 121  NGAIAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSNCGHHMIYSGVVAGAREAL 180

Query: 548  ICGVPSFSISLNWKKNESHESDFKDAVDVCLPLIQAAIGDIEKGVFPKSCSINIEIPTSP 727
             CGVPS SISLNWKK ES ESDFKDAV VCLP+I AAI DIEKG FPKSCS+NIEIPTSP
Sbjct: 181  FCGVPSLSISLNWKKEESQESDFKDAVAVCLPVINAAIRDIEKGFFPKSCSLNIEIPTSP 240

Query: 728  LKNKGFKVTRKSLWRSPPCWQAVAANRHTPGGNFMSNQQSLGIQLXXXXXXXXXXXXXXX 907
              NKGFK+T++S+WRS P WQAV+ANRH   G+FMSNQQSLG+QL               
Sbjct: 241  SANKGFKLTKRSMWRSSPSWQAVSANRHPSAGHFMSNQQSLGLQLAQLSRDASAAGAARR 300

Query: 908  XNTQKKN-VEIESVGAAGKSD-QRVKKYFRLEFLDKEQEDMDEDLDFRALENEF 1063
              TQ+KN +EIESVGA GKSD  RVKKYFR+EFLDKE ED DEDLDFRA+EN F
Sbjct: 301  LTTQRKNMLEIESVGAGGKSDSNRVKKYFRMEFLDKELEDTDEDLDFRAVENGF 354


>ref|XP_004146815.1| PREDICTED: 5'-nucleotidase SurE-like [Cucumis sativus]
            gi|449476647|ref|XP_004154795.1| PREDICTED:
            5'-nucleotidase SurE-like [Cucumis sativus]
          Length = 388

 Score =  415 bits (1066), Expect = e-113
 Identities = 224/348 (64%), Positives = 253/348 (72%), Gaps = 13/348 (3%)
 Frame = +2

Query: 59   NLLPASLVSNLQEVLINRKAXXXXXXXXXXXXXXXXXXXXXX-----------KPVVLVT 205
            N LP  LVSNL++VL +RK                                  KPV+LVT
Sbjct: 10   NFLPPGLVSNLEDVLRSRKGPGERGEESKDVNNASPHPSSSTSDANLEVSATQKPVILVT 69

Query: 206  NGDGIDATGLTVLVQALVGLGLFNVHVCAPQSDRSVSGHSMTPFETLMVSPVEISGATAY 385
            N +GID+ GLT LV+ LV  G +NVHVCAPQSD+SVS HS+T  ET+ VS  EI+GATAY
Sbjct: 70   NSEGIDSPGLTYLVEGLVREGSYNVHVCAPQSDKSVSSHSVTLRETVAVSSAEINGATAY 129

Query: 386  EVSGTPADCVSLALSGALFSWSKPALVISGINRGSGCGLQMFYSGTAAGAREALICGVPS 565
            EVSGTP DCVSLALSGALFSWSKP LVISGINRGS CG QMFYSG  AGAREALICGVPS
Sbjct: 130  EVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHQMFYSGVVAGAREALICGVPS 189

Query: 566  FSISLNWKKNESHESDFKDAVDVCLPLIQAAIGDIEKGVFPKSCSINIEIPTSPLKNKGF 745
             SISLNWKK++S ESDFKDAV VCLPLI AAI DIEKG FPKSCS+NIEIPTSP+ NKGF
Sbjct: 190  ISISLNWKKDQSQESDFKDAVSVCLPLINAAISDIEKGNFPKSCSLNIEIPTSPMTNKGF 249

Query: 746  KVTRKSLWRSPPCWQAVAANRHTPGGNFMSNQQSLGIQLXXXXXXXXXXXXXXXXNTQKK 925
            K T++SLWRS   WQAV+ANR+ P G+FMSNQQSLG+QL                 TQ++
Sbjct: 250  KSTKQSLWRSTLNWQAVSANRY-PAGHFMSNQQSLGLQLAQLGRDASAAGAARRLTTQRQ 308

Query: 926  N-VEIESVGAAGKSD-QRVKKYFRLEFLDKEQEDMDEDLDFRALENEF 1063
            N VEIES GA GKSD +RVKK+FR+EFLDKEQ+  D+DLDF ALEN F
Sbjct: 309  NMVEIESTGAVGKSDSERVKKFFRMEFLDKEQDHKDDDLDFPALENGF 356


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