BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010307
         (527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24753.3| unnamed protein product [Vitis vinifera]              161   6e-38
ref|XP_002275875.1| PREDICTED: transcription factor tau subunit ...   161   6e-38
ref|XP_003537671.1| PREDICTED: general transcription factor 3C p...   117   1e-24
ref|XP_003622989.1| General transcription factor 3C polypeptide ...   113   2e-23
ref|XP_003622988.1| General transcription factor 3C polypeptide ...   113   2e-23

>emb|CBI24753.3| unnamed protein product [Vitis vinifera]
          Length = 597

 Score =  161 bits (407), Expect = 6e-38
 Identities = 78/110 (70%), Positives = 92/110 (83%)
 Frame = +2

Query: 197 IVARVSEAYHFNGMVDYQHVLAVHAHAGKNKSRKRDRAEQEPYSEKGAVVDVDQEDVMIL 376
           I+ARVSEAYHFNGMVDYQHVL VHA   + K  KR+ AE EP+ EKG +VDVDQED+MIL
Sbjct: 116 IIARVSEAYHFNGMVDYQHVLPVHADVARRK--KRNWAEVEPHLEKGDLVDVDQEDLMIL 173

Query: 377 VPPLFSPKDFPEKLALKPSATVSAKKKQEAIVKQRWEMQIEPCVAIDYNI 526
           +PPLFSPKD PEKL L+PS T++ KKKQE +V+QRWEM IEPC+AID+ I
Sbjct: 174 LPPLFSPKDVPEKLVLRPSMTLNLKKKQEGVVQQRWEMGIEPCLAIDFEI 223


>ref|XP_002275875.1| PREDICTED: transcription factor tau subunit sfc1-like [Vitis
           vinifera]
          Length = 568

 Score =  161 bits (407), Expect = 6e-38
 Identities = 78/110 (70%), Positives = 92/110 (83%)
 Frame = +2

Query: 197 IVARVSEAYHFNGMVDYQHVLAVHAHAGKNKSRKRDRAEQEPYSEKGAVVDVDQEDVMIL 376
           I+ARVSEAYHFNGMVDYQHVL VHA   + K  KR+ AE EP+ EKG +VDVDQED+MIL
Sbjct: 117 IIARVSEAYHFNGMVDYQHVLPVHADVARRK--KRNWAEVEPHLEKGDLVDVDQEDLMIL 174

Query: 377 VPPLFSPKDFPEKLALKPSATVSAKKKQEAIVKQRWEMQIEPCVAIDYNI 526
           +PPLFSPKD PEKL L+PS T++ KKKQE +V+QRWEM IEPC+AID+ I
Sbjct: 175 LPPLFSPKDVPEKLVLRPSMTLNLKKKQEGVVQQRWEMGIEPCLAIDFEI 224


>ref|XP_003537671.1| PREDICTED: general transcription factor 3C polypeptide 5-like
           [Glycine max]
          Length = 547

 Score =  117 bits (293), Expect = 1e-24
 Identities = 57/110 (51%), Positives = 76/110 (69%)
 Frame = +2

Query: 197 IVARVSEAYHFNGMVDYQHVLAVHAHAGKNKSRKRDRAEQEPYSEKGAVVDVDQEDVMIL 376
           IVAR  EAY F GM DYQHV+ VHA   + K R     E E + +KG  +D+D EDVMI+
Sbjct: 115 IVARFPEAYFFYGMADYQHVIPVHADVARRKKRNWSELE-ELHFDKGGFMDLDHEDVMII 173

Query: 377 VPPLFSPKDFPEKLALKPSATVSAKKKQEAIVKQRWEMQIEPCVAIDYNI 526
           VPP+F+PKD PE L L+P+   S+KKK E +V+  +EM +EP +AID++I
Sbjct: 174 VPPIFAPKDVPENLVLRPATMSSSKKKPEEVVQPHFEMDMEPVLAIDFDI 223


>ref|XP_003622989.1| General transcription factor 3C polypeptide [Medicago truncatula]
           gi|355498004|gb|AES79207.1| General transcription factor
           3C polypeptide [Medicago truncatula]
          Length = 509

 Score =  113 bits (282), Expect = 2e-23
 Identities = 55/108 (50%), Positives = 72/108 (66%)
 Frame = +2

Query: 197 IVARVSEAYHFNGMVDYQHVLAVHAHAGKNKSRKRDRAEQEPYSEKGAVVDVDQEDVMIL 376
           IV RV EAY F GM DYQ+V+ VHA   K K R     E E +  KG  +DVD ED+MI+
Sbjct: 33  IVGRVPEAYFFEGMADYQYVVPVHADVAKRKKRNWSEPE-ETHLAKGGRIDVDHEDIMII 91

Query: 377 VPPLFSPKDFPEKLALKPSATVSAKKKQEAIVKQRWEMQIEPCVAIDY 520
           VPP+F+PKD PE L L+P    S+KKK+E IV   +E+ +EP +A+D+
Sbjct: 92  VPPIFAPKDMPEDLLLRPPTVSSSKKKEEEIVHPHFEIDMEPVLALDF 139


>ref|XP_003622988.1| General transcription factor 3C polypeptide [Medicago truncatula]
           gi|355498003|gb|AES79206.1| General transcription factor
           3C polypeptide [Medicago truncatula]
          Length = 612

 Score =  113 bits (282), Expect = 2e-23
 Identities = 55/108 (50%), Positives = 72/108 (66%)
 Frame = +2

Query: 197 IVARVSEAYHFNGMVDYQHVLAVHAHAGKNKSRKRDRAEQEPYSEKGAVVDVDQEDVMIL 376
           IV RV EAY F GM DYQ+V+ VHA   K K R     E E +  KG  +DVD ED+MI+
Sbjct: 136 IVGRVPEAYFFEGMADYQYVVPVHADVAKRKKRNWSEPE-ETHLAKGGRIDVDHEDIMII 194

Query: 377 VPPLFSPKDFPEKLALKPSATVSAKKKQEAIVKQRWEMQIEPCVAIDY 520
           VPP+F+PKD PE L L+P    S+KKK+E IV   +E+ +EP +A+D+
Sbjct: 195 VPPIFAPKDMPEDLLLRPPTVSSSKKKEEEIVHPHFEIDMEPVLALDF 242