BLASTX nr result
ID: Coptis24_contig00010307
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00010307 (527 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI24753.3| unnamed protein product [Vitis vinifera] 161 6e-38 ref|XP_002275875.1| PREDICTED: transcription factor tau subunit ... 161 6e-38 ref|XP_003537671.1| PREDICTED: general transcription factor 3C p... 117 1e-24 ref|XP_003622989.1| General transcription factor 3C polypeptide ... 113 2e-23 ref|XP_003622988.1| General transcription factor 3C polypeptide ... 113 2e-23 >emb|CBI24753.3| unnamed protein product [Vitis vinifera] Length = 597 Score = 161 bits (407), Expect = 6e-38 Identities = 78/110 (70%), Positives = 92/110 (83%) Frame = +2 Query: 197 IVARVSEAYHFNGMVDYQHVLAVHAHAGKNKSRKRDRAEQEPYSEKGAVVDVDQEDVMIL 376 I+ARVSEAYHFNGMVDYQHVL VHA + K KR+ AE EP+ EKG +VDVDQED+MIL Sbjct: 116 IIARVSEAYHFNGMVDYQHVLPVHADVARRK--KRNWAEVEPHLEKGDLVDVDQEDLMIL 173 Query: 377 VPPLFSPKDFPEKLALKPSATVSAKKKQEAIVKQRWEMQIEPCVAIDYNI 526 +PPLFSPKD PEKL L+PS T++ KKKQE +V+QRWEM IEPC+AID+ I Sbjct: 174 LPPLFSPKDVPEKLVLRPSMTLNLKKKQEGVVQQRWEMGIEPCLAIDFEI 223 >ref|XP_002275875.1| PREDICTED: transcription factor tau subunit sfc1-like [Vitis vinifera] Length = 568 Score = 161 bits (407), Expect = 6e-38 Identities = 78/110 (70%), Positives = 92/110 (83%) Frame = +2 Query: 197 IVARVSEAYHFNGMVDYQHVLAVHAHAGKNKSRKRDRAEQEPYSEKGAVVDVDQEDVMIL 376 I+ARVSEAYHFNGMVDYQHVL VHA + K KR+ AE EP+ EKG +VDVDQED+MIL Sbjct: 117 IIARVSEAYHFNGMVDYQHVLPVHADVARRK--KRNWAEVEPHLEKGDLVDVDQEDLMIL 174 Query: 377 VPPLFSPKDFPEKLALKPSATVSAKKKQEAIVKQRWEMQIEPCVAIDYNI 526 +PPLFSPKD PEKL L+PS T++ KKKQE +V+QRWEM IEPC+AID+ I Sbjct: 175 LPPLFSPKDVPEKLVLRPSMTLNLKKKQEGVVQQRWEMGIEPCLAIDFEI 224 >ref|XP_003537671.1| PREDICTED: general transcription factor 3C polypeptide 5-like [Glycine max] Length = 547 Score = 117 bits (293), Expect = 1e-24 Identities = 57/110 (51%), Positives = 76/110 (69%) Frame = +2 Query: 197 IVARVSEAYHFNGMVDYQHVLAVHAHAGKNKSRKRDRAEQEPYSEKGAVVDVDQEDVMIL 376 IVAR EAY F GM DYQHV+ VHA + K R E E + +KG +D+D EDVMI+ Sbjct: 115 IVARFPEAYFFYGMADYQHVIPVHADVARRKKRNWSELE-ELHFDKGGFMDLDHEDVMII 173 Query: 377 VPPLFSPKDFPEKLALKPSATVSAKKKQEAIVKQRWEMQIEPCVAIDYNI 526 VPP+F+PKD PE L L+P+ S+KKK E +V+ +EM +EP +AID++I Sbjct: 174 VPPIFAPKDVPENLVLRPATMSSSKKKPEEVVQPHFEMDMEPVLAIDFDI 223 >ref|XP_003622989.1| General transcription factor 3C polypeptide [Medicago truncatula] gi|355498004|gb|AES79207.1| General transcription factor 3C polypeptide [Medicago truncatula] Length = 509 Score = 113 bits (282), Expect = 2e-23 Identities = 55/108 (50%), Positives = 72/108 (66%) Frame = +2 Query: 197 IVARVSEAYHFNGMVDYQHVLAVHAHAGKNKSRKRDRAEQEPYSEKGAVVDVDQEDVMIL 376 IV RV EAY F GM DYQ+V+ VHA K K R E E + KG +DVD ED+MI+ Sbjct: 33 IVGRVPEAYFFEGMADYQYVVPVHADVAKRKKRNWSEPE-ETHLAKGGRIDVDHEDIMII 91 Query: 377 VPPLFSPKDFPEKLALKPSATVSAKKKQEAIVKQRWEMQIEPCVAIDY 520 VPP+F+PKD PE L L+P S+KKK+E IV +E+ +EP +A+D+ Sbjct: 92 VPPIFAPKDMPEDLLLRPPTVSSSKKKEEEIVHPHFEIDMEPVLALDF 139 >ref|XP_003622988.1| General transcription factor 3C polypeptide [Medicago truncatula] gi|355498003|gb|AES79206.1| General transcription factor 3C polypeptide [Medicago truncatula] Length = 612 Score = 113 bits (282), Expect = 2e-23 Identities = 55/108 (50%), Positives = 72/108 (66%) Frame = +2 Query: 197 IVARVSEAYHFNGMVDYQHVLAVHAHAGKNKSRKRDRAEQEPYSEKGAVVDVDQEDVMIL 376 IV RV EAY F GM DYQ+V+ VHA K K R E E + KG +DVD ED+MI+ Sbjct: 136 IVGRVPEAYFFEGMADYQYVVPVHADVAKRKKRNWSEPE-ETHLAKGGRIDVDHEDIMII 194 Query: 377 VPPLFSPKDFPEKLALKPSATVSAKKKQEAIVKQRWEMQIEPCVAIDY 520 VPP+F+PKD PE L L+P S+KKK+E IV +E+ +EP +A+D+ Sbjct: 195 VPPIFAPKDMPEDLLLRPPTVSSSKKKEEEIVHPHFEIDMEPVLALDF 242