BLASTX nr result

ID: Coptis24_contig00010302 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010302
         (701 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003614571.1| Prefoldin subunit [Medicago truncatula] gi|3...   187   1e-45
ref|XP_002269426.2| PREDICTED: prefoldin subunit 6-like [Vitis v...   186   3e-45
emb|CBI30868.3| unnamed protein product [Vitis vinifera]              184   1e-44
gb|AFK40751.1| unknown [Lotus japonicus]                              184   2e-44
ref|XP_003539694.1| PREDICTED: prefoldin subunit 6-like isoform ...   182   4e-44

>ref|XP_003614571.1| Prefoldin subunit [Medicago truncatula] gi|355515906|gb|AES97529.1|
           Prefoldin subunit [Medicago truncatula]
          Length = 129

 Score =  187 bits (476), Expect = 1e-45
 Identities = 91/113 (80%), Positives = 107/113 (94%)
 Frame = -1

Query: 668 LRELQRELENKANDVNKLQKDISKNHEVRKKYTIQLGENEIVLKELDLVKEDANVYKLIG 489
           +R+LQRELENKAND+NKLQKDI+KNH+VRKKYTIQLGENE+VLKELDL+ EDANVYKLIG
Sbjct: 6   IRDLQRELENKANDLNKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLNEDANVYKLIG 65

Query: 488 PVLVKQDVMEANANVRKRIEYITAELKRLEGALQDMEGQHNSKKESVLKLQQK 330
           PVLVKQD+ EANANVRKRIEYI+AELKRL+  +QD+E + NSKKE+++KLQQK
Sbjct: 66  PVLVKQDLAEANANVRKRIEYISAELKRLDATVQDLEEKQNSKKETIMKLQQK 118


>ref|XP_002269426.2| PREDICTED: prefoldin subunit 6-like [Vitis vinifera]
          Length = 133

 Score =  186 bits (473), Expect = 3e-45
 Identities = 92/116 (79%), Positives = 108/116 (93%)
 Frame = -1

Query: 677 AGALRELQRELENKANDVNKLQKDISKNHEVRKKYTIQLGENEIVLKELDLVKEDANVYK 498
           + A+RELQRELE KAND++KLQKDISKNH+VRKKYTIQLGENE+VLKELDL++EDANV+K
Sbjct: 7   SAAMRELQRELETKANDLSKLQKDISKNHQVRKKYTIQLGENELVLKELDLLREDANVFK 66

Query: 497 LIGPVLVKQDVMEANANVRKRIEYITAELKRLEGALQDMEGQHNSKKESVLKLQQK 330
           LIGPVLVKQD+ EANANVRKRI+YI+AELKRL+  LQD+E + NSKKE+V KLQQK
Sbjct: 67  LIGPVLVKQDLAEANANVRKRIDYISAELKRLDATLQDLEEKQNSKKEAVFKLQQK 122


>emb|CBI30868.3| unnamed protein product [Vitis vinifera]
          Length = 124

 Score =  184 bits (468), Expect = 1e-44
 Identities = 91/113 (80%), Positives = 106/113 (93%)
 Frame = -1

Query: 668 LRELQRELENKANDVNKLQKDISKNHEVRKKYTIQLGENEIVLKELDLVKEDANVYKLIG 489
           +RELQRELE KAND++KLQKDISKNH+VRKKYTIQLGENE+VLKELDL++EDANV+KLIG
Sbjct: 1   MRELQRELETKANDLSKLQKDISKNHQVRKKYTIQLGENELVLKELDLLREDANVFKLIG 60

Query: 488 PVLVKQDVMEANANVRKRIEYITAELKRLEGALQDMEGQHNSKKESVLKLQQK 330
           PVLVKQD+ EANANVRKRI+YI+AELKRL+  LQD+E + NSKKE+V KLQQK
Sbjct: 61  PVLVKQDLAEANANVRKRIDYISAELKRLDATLQDLEEKQNSKKEAVFKLQQK 113


>gb|AFK40751.1| unknown [Lotus japonicus]
          Length = 129

 Score =  184 bits (466), Expect = 2e-44
 Identities = 87/113 (76%), Positives = 108/113 (95%)
 Frame = -1

Query: 668 LRELQRELENKANDVNKLQKDISKNHEVRKKYTIQLGENEIVLKELDLVKEDANVYKLIG 489
           +R+LQRELENKAND++KLQKDI+KNH+VRKKYT+QLGENE+VLKELDL+K+DANVYKLIG
Sbjct: 6   IRDLQRELENKANDLSKLQKDIAKNHQVRKKYTVQLGENELVLKELDLLKQDANVYKLIG 65

Query: 488 PVLVKQDVMEANANVRKRIEYITAELKRLEGALQDMEGQHNSKKESVLKLQQK 330
           PVLVKQD+ EANANVRKRIEYI+AELKRL+  +QD+E + NSKKE+++K+QQ+
Sbjct: 66  PVLVKQDLAEANANVRKRIEYISAELKRLDATVQDLEEKQNSKKEAIMKVQQR 118


>ref|XP_003539694.1| PREDICTED: prefoldin subunit 6-like isoform 1 [Glycine max]
          Length = 175

 Score =  182 bits (463), Expect = 4e-44
 Identities = 89/125 (71%), Positives = 113/125 (90%), Gaps = 1/125 (0%)
 Frame = -1

Query: 701 PDKKKKKMAGA-LRELQRELENKANDVNKLQKDISKNHEVRKKYTIQLGENEIVLKELDL 525
           P K +  M+ + LR+LQRELENKAND++KLQK+I+KNH++RKKYT+QLGENE+VLKELDL
Sbjct: 40  PKKVRNTMSSSNLRDLQRELENKANDLSKLQKEIAKNHQMRKKYTLQLGENELVLKELDL 99

Query: 524 VKEDANVYKLIGPVLVKQDVMEANANVRKRIEYITAELKRLEGALQDMEGQHNSKKESVL 345
           +K+D NVYKLIGPVLVKQD+ EANANVRKRIEYI+AELKRL+  +QD+E + NSKK+++L
Sbjct: 100 LKDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDATVQDLEEKQNSKKDAIL 159

Query: 344 KLQQK 330
           KLQQ+
Sbjct: 160 KLQQR 164


Top