BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010298
         (1245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263313.1| PREDICTED: homeobox protein knotted-1-like 6...   373   e-101
ref|XP_004165354.1| PREDICTED: LOW QUALITY PROTEIN: homeobox pro...   364   2e-98
ref|XP_002525403.1| homeobox protein knotted-1, putative [Ricinu...   355   1e-95
ref|XP_002282076.1| PREDICTED: homeobox protein knotted-1-like 6...   353   5e-95
gb|AEO14150.1| KNAT2/6 protein [Eschscholzia californica subsp. ...   342   9e-92

>ref|XP_002263313.1| PREDICTED: homeobox protein knotted-1-like 6 [Vitis vinifera]
            gi|297739081|emb|CBI28570.3| unnamed protein product
            [Vitis vinifera]
          Length = 318

 Score =  373 bits (957), Expect = e-101
 Identities = 201/332 (60%), Positives = 240/332 (72%), Gaps = 1/332 (0%)
 Frame = +2

Query: 248  MEEMYGLHSSLNYSDQQHPSILQGNMVIPSDYHQQSLLTTSSSFRD-RIPMIFGSDXXXX 424
            MEE+YGL+S+ +YSD+   S    N+++P+DY  QS  +++++FRD RIP +FGS+    
Sbjct: 1    MEEVYGLNSTSDYSDKVLMS--PENLILPADY--QSFFSSAAAFRDYRIP-VFGSNELIS 55

Query: 425  XXXXXXNXXXXXXXXXXXXXXXXXXGPGIHEAGDVMSCMKAKIVSHPRYPSLLEAYIDCQ 604
                                      P I    DV S +KAKI SHP YP LLEAYIDCQ
Sbjct: 56   VASAISETASIT--------------PEIQREEDVSSVIKAKIASHPCYPRLLEAYIDCQ 101

Query: 605  KVGAPPEIAGLLEEIRGENSLYKRNAVSTRLGSDPELDDFMESYCDILVKYKSDLARPFD 784
            KVGAPPEIA LL+EIR EN + KR+AVST LG+DPELD+FME+YCD+L KYKSDLARPFD
Sbjct: 102  KVGAPPEIACLLDEIRRENDVCKRDAVSTCLGADPELDEFMETYCDMLEKYKSDLARPFD 161

Query: 785  EATAFLNKIELQLSNLCTKAPSRTCLSDEAIGSSEDDFSGGEAEIPEIHPRSEDRDLKDK 964
            EAT FLNKIE+QL NLC  A  R+ L DEA+ SS++DFSGGE E+ E  PR ED++LK++
Sbjct: 162  EATTFLNKIEMQLGNLCNDASIRS-LPDEAVVSSDEDFSGGE-EVQEAQPRGEDQELKER 219

Query: 965  LLRKYSGYISSLXXXXXXXXXXXXXXXEARQTLLEWWNMHYKWPYPTEADKIALAESTGL 1144
            LLR++ G ISSL               EARQTLLEWWN+HYKWPYPTEADKIALAE+TGL
Sbjct: 220  LLRRFGGRISSLKLEFSKKKKKGKLPKEARQTLLEWWNLHYKWPYPTEADKIALAETTGL 279

Query: 1145 DQKQINNWFINQRKRHWKPSENMQFAVMDSLS 1240
            DQKQINNWFINQRKRHWKPSENMQFAVMD+ S
Sbjct: 280  DQKQINNWFINQRKRHWKPSENMQFAVMDNHS 311


>ref|XP_004165354.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein knotted-1-like
            6-like [Cucumis sativus]
          Length = 324

 Score =  364 bits (935), Expect = 2e-98
 Identities = 199/334 (59%), Positives = 231/334 (69%), Gaps = 2/334 (0%)
 Frame = +2

Query: 248  MEEMYGLHSSLNYSDQQHPSILQGNMVIPSDYHQQSLLTTSSSFRDRIPMIFGSDXXXXX 427
            MEEMYGL SS  YSD+   S    N+++P DY  QSLL +S  FRDRIP +FGS      
Sbjct: 1    MEEMYGLQSSAEYSDKALMS--PENLILPPDY--QSLLVSSGEFRDRIP-VFGS------ 49

Query: 428  XXXXXNXXXXXXXXXXXXXXXXXXGPGIHEAGDVMSCMKAKIVSHPRYPSLLEAYIDCQK 607
                 N                   P I    D+++ +KAKI SHP YP LL+AYIDCQK
Sbjct: 50   -----NELLSAAASAISEAEAASITPDIQREEDMVNVIKAKISSHPTYPRLLDAYIDCQK 104

Query: 608  VGAPPEIAGLLEEIRGENSLYKRNAVSTRLGSDPELDDFMESYCDILVKYKSDLARPFDE 787
            VGAPPEIA LLE IR E+ L  R+AV+T LG DPELD+FME+YCD+LVKYKSDL RPFDE
Sbjct: 105  VGAPPEIAHLLEGIRQESDLCNRHAVTTCLGVDPELDEFMETYCDMLVKYKSDLKRPFDE 164

Query: 788  ATAFLNKIELQLSNLCTKAPSRTCLSDEAIGSSEDDFSGGEAEI--PEIHPRSEDRDLKD 961
            AT FLNKIELQLSNLC  A SR+ LSD+   SS+++ SGGE E+   E   + E+RDLKD
Sbjct: 165  ATTFLNKIELQLSNLCNGAFSRS-LSDDGAVSSDEELSGGEMEVVEAEAQTKGENRDLKD 223

Query: 962  KLLRKYSGYISSLXXXXXXXXXXXXXXXEARQTLLEWWNMHYKWPYPTEADKIALAESTG 1141
            KLLR++  +IS+L               EARQTL EWWN+HYKWPYPTEADK+ALAE TG
Sbjct: 224  KLLRRFGSHISTLKLEFSKXKKKGKLPKEARQTLFEWWNVHYKWPYPTEADKVALAERTG 283

Query: 1142 LDQKQINNWFINQRKRHWKPSENMQFAVMDSLSA 1243
            LDQKQINNWFINQRKRHWKPSENMQF  MD LS+
Sbjct: 284  LDQKQINNWFINQRKRHWKPSENMQFEGMDGLSS 317


>ref|XP_002525403.1| homeobox protein knotted-1, putative [Ricinus communis]
            gi|223535366|gb|EEF37041.1| homeobox protein knotted-1,
            putative [Ricinus communis]
          Length = 337

 Score =  355 bits (912), Expect = 1e-95
 Identities = 192/340 (56%), Positives = 234/340 (68%), Gaps = 9/340 (2%)
 Frame = +2

Query: 248  MEEMYGLHSSL--NYSDQQHPSILQG-NMVIPSDYHQQSLLT---TSSSFRDRIPMIFGS 409
            M+ MYGLHSS   +YSD+    ++   N++ PSDYH   +++   TS +F++RI  +  S
Sbjct: 1    MDGMYGLHSSTTTDYSDKTAALMMSPENLMFPSDYHHHQMMSSFITSDAFQNRINPLLVS 60

Query: 410  DXXXXXXXXXXNXXXXXXXXXXXXXXXXXXGPGIHEAGDVMSCM-KAKIVSHPRYPSLLE 586
            D          +                    G+ E  D MS + KAKI SHP YP LL 
Sbjct: 61   DDLLSAAASAISETTASIAPPEIPR-------GLDE--DSMSTLIKAKIASHPSYPRLLH 111

Query: 587  AYIDCQKVGAPPEIAGLLEEIRGENSLYKRN--AVSTRLGSDPELDDFMESYCDILVKYK 760
            AYIDCQKVGAPPEIAGLL+EIR EN +YK +  A ST +G+DPELD+FME+YCD+L+KYK
Sbjct: 112  AYIDCQKVGAPPEIAGLLDEIRRENDMYKGDGGAASTCVGADPELDEFMETYCDVLLKYK 171

Query: 761  SDLARPFDEATAFLNKIELQLSNLCTKAPSRTCLSDEAIGSSEDDFSGGEAEIPEIHPRS 940
            SDL +PFDEAT FLNKIE+QL NLCT A   T LSDE   SS+++ SGGE E  E  P S
Sbjct: 172  SDLEKPFDEATTFLNKIEMQLRNLCTGASVST-LSDEGAPSSDEELSGGELEAQEAQPSS 230

Query: 941  EDRDLKDKLLRKYSGYISSLXXXXXXXXXXXXXXXEARQTLLEWWNMHYKWPYPTEADKI 1120
            +DRDLKD+L R++  +IS+L               EARQTLLEWWN+HYKWPYPTEADKI
Sbjct: 231  KDRDLKDRLFRRFGSHISTLKLEFSKKKKKGKLPKEARQTLLEWWNVHYKWPYPTEADKI 290

Query: 1121 ALAESTGLDQKQINNWFINQRKRHWKPSENMQFAVMDSLS 1240
            ALA+STGLDQKQINNWFINQRKRHWKPSENMQFAV+D++S
Sbjct: 291  ALADSTGLDQKQINNWFINQRKRHWKPSENMQFAVVDNIS 330


>ref|XP_002282076.1| PREDICTED: homeobox protein knotted-1-like 6 [Vitis vinifera]
            gi|297733756|emb|CBI15003.3| unnamed protein product
            [Vitis vinifera]
          Length = 319

 Score =  353 bits (906), Expect = 5e-95
 Identities = 191/331 (57%), Positives = 223/331 (67%), Gaps = 1/331 (0%)
 Frame = +2

Query: 248  MEEMYGLHSSLNYSDQQHPSILQGNMVIPSDYHQQSLLTTSSSFRDRIPM-IFGSDXXXX 424
            M+++YGLHS  +      P     N++ PS Y          +F    P  IFGSD    
Sbjct: 1    MDQLYGLHSPSSSDYHHPPPFPPENLISPSHY---------PNFNSPAPFPIFGSDQLLS 51

Query: 425  XXXXXXNXXXXXXXXXXXXXXXXXXGPGIHEAGDVMSCMKAKIVSHPRYPSLLEAYIDCQ 604
                  +                  G G  E  +V S ++AKI +HP YP LL AYI+CQ
Sbjct: 52   ASSLVVSDAASMVAEIQ--------GGGSGE--EVSSAIRAKIATHPLYPKLLHAYIECQ 101

Query: 605  KVGAPPEIAGLLEEIRGENSLYKRNAVSTRLGSDPELDDFMESYCDILVKYKSDLARPFD 784
            KVGAPPE+A LLEEIR  + L +RNAVST LG+DPELD+FME+YCDILVKYKSDLARPFD
Sbjct: 102  KVGAPPEVAYLLEEIRRGSELCRRNAVSTCLGADPELDEFMETYCDILVKYKSDLARPFD 161

Query: 785  EATAFLNKIELQLSNLCTKAPSRTCLSDEAIGSSEDDFSGGEAEIPEIHPRSEDRDLKDK 964
            EATAFLN IE QL+ LC  A SR+ +SDEA GSSE+D SGGE E+ E    +E+++LKDK
Sbjct: 162  EATAFLNNIETQLNTLCNGA-SRSYVSDEAAGSSEEDLSGGEVEVQECLQTTENQELKDK 220

Query: 965  LLRKYSGYISSLXXXXXXXXXXXXXXXEARQTLLEWWNMHYKWPYPTEADKIALAESTGL 1144
            LLRKYSGYIS+L               EARQ LL+WWN+HYKWPYPTE DKIALAESTGL
Sbjct: 221  LLRKYSGYISTLKHEFSKTKKKGKLPKEARQALLDWWNIHYKWPYPTEEDKIALAESTGL 280

Query: 1145 DQKQINNWFINQRKRHWKPSENMQFAVMDSL 1237
            DQKQINNWFINQRKRHWKPSENMQFAVMDS+
Sbjct: 281  DQKQINNWFINQRKRHWKPSENMQFAVMDSI 311


>gb|AEO14150.1| KNAT2/6 protein [Eschscholzia californica subsp. californica]
          Length = 355

 Score =  342 bits (878), Expect = 9e-92
 Identities = 195/354 (55%), Positives = 228/354 (64%), Gaps = 23/354 (6%)
 Frame = +2

Query: 248  MEEMYGLHSSLNYSDQQHPSIL---QGNMV--IPSDYHQQ------SLLTTSSSFRD--- 385
            ME++Y LH S+N     +PS +     N++   P++YH        S L +S  F D   
Sbjct: 1    MEDLYSLHPSMN----NYPSSMTSSDNNLLPQTPANYHHHHHQDDGSNLLSSIPFHDHNN 56

Query: 386  RIP-MIFGSDXXXXXXXXXXNXXXXXXXXXXXXXXXXXXGPGIHEAGDVMSCMKAKIVSH 562
            RIP M FGS           +                       +   +MS +KAKI SH
Sbjct: 57   RIPCMRFGSSDHHQQQFI--SSISETNSITDDQRVVVSGNDDEDDEVMMMSYIKAKIASH 114

Query: 563  PRYPSLLEAYIDCQKVGAPPEIAGLLEEIRGENSLYKRNAVSTR-LGSDPELDDFMESYC 739
            PRYP LL+AYIDCQKVGAP EIA LL+EIR EN   KR  VST  LG DPELD+FME+YC
Sbjct: 115  PRYPILLDAYIDCQKVGAPMEIACLLDEIRQENDTSKRTVVSTTCLGDDPELDNFMETYC 174

Query: 740  DILVKYKSDLARPFDEATAFLNKIELQLSNLCTKAPSRTCLS-------DEAIGSSEDDF 898
            DILV+YKSDL+RPF+EAT FLNKI++QLSNLC    S   +S       DE +GSSEDD 
Sbjct: 175  DILVRYKSDLSRPFNEATTFLNKIQMQLSNLCNNKSSSNRISSASAANSDEIVGSSEDDL 234

Query: 899  SGGEAEIPEIHPRSEDRDLKDKLLRKYSGYISSLXXXXXXXXXXXXXXXEARQTLLEWWN 1078
            SGGE E+ E+ PR EDR++KDKLLRKYSGYISSL               +ARQ L +WWN
Sbjct: 235  SGGEIEVQEVQPRLEDREMKDKLLRKYSGYISSLKQEFSKKKKKGKLPKDARQILFDWWN 294

Query: 1079 MHYKWPYPTEADKIALAESTGLDQKQINNWFINQRKRHWKPSENMQFAVMDSLS 1240
            +H KWPYPTEADKIALAESTGLDQKQINNWFINQRKRHWKPSENMQF  MDS+S
Sbjct: 295  VHNKWPYPTEADKIALAESTGLDQKQINNWFINQRKRHWKPSENMQFGDMDSIS 348