BLASTX nr result
ID: Coptis24_contig00010296
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00010296 (759 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002524917.1| exonuclease, putative [Ricinus communis] gi|... 304 2e-80 ref|XP_002278458.2| PREDICTED: small RNA degrading nuclease 3-li... 291 1e-76 emb|CBI33775.3| unnamed protein product [Vitis vinifera] 291 1e-76 gb|AFK41173.1| unknown [Lotus japonicus] 290 3e-76 ref|XP_003550038.1| PREDICTED: small RNA degrading nuclease 3-li... 285 6e-75 >ref|XP_002524917.1| exonuclease, putative [Ricinus communis] gi|223535752|gb|EEF37414.1| exonuclease, putative [Ricinus communis] Length = 504 Score = 304 bits (778), Expect = 2e-80 Identities = 153/252 (60%), Positives = 195/252 (77%), Gaps = 1/252 (0%) Frame = -3 Query: 757 FPSKNEEWVATKLGKSSKAVKSNSMVAVDCEMVLCQDNTEALVQVCVVDENMEVKLNELV 578 FPS ++ WV TKL K SK + ++S++A+DCEMVLC+D TEALV+VCVVD N++VKL+E V Sbjct: 120 FPSYDQGWVVTKLPKKSKLMSTDSIIAIDCEMVLCEDGTEALVRVCVVDRNLQVKLDEKV 179 Query: 577 NPNKAIADYRTDITGLSAKDLEGVTCTLANVQKKMKKLLRHGTILVGHSLSNDLHALKLD 398 NP K +ADYRT+ITG++A+DL+GV+C+LA++QK MKKLL+ GTILVGH L NDL ALKLD Sbjct: 180 NPYKPVADYRTEITGVTARDLDGVSCSLADIQKFMKKLLQKGTILVGHGLYNDLQALKLD 239 Query: 397 HARVIDTSYIFEGPTRRKLSLNDLCKTILGYEVRKDGAPHNCLDDARAAMKLIIAKLEHG 218 HARV+DTS+IF R SL+ LCK++LG+E+RK GAPHNC+DDA AAMKL +AK+E G Sbjct: 240 HARVVDTSFIFRRLDGRPPSLDTLCKSVLGFELRKGGAPHNCMDDASAAMKLFLAKIERG 299 Query: 217 FDGTISCISKHVPESESAKLLLHGISMDVPKEELRRIFP-GFTFEFQPRLNIRKQLQKKY 41 D I +HV E+E AKLLLHGI DV EEL R+FP FT E +P K+ + +Y Sbjct: 300 VDNDIPVNHEHVLENELAKLLLHGIPTDVHSEELHRVFPEQFTIELKP----PKKGRVQY 355 Query: 40 SISAVFNDPQEA 5 S A+F DPQEA Sbjct: 356 SALAIFKDPQEA 367 >ref|XP_002278458.2| PREDICTED: small RNA degrading nuclease 3-like [Vitis vinifera] Length = 389 Score = 291 bits (744), Expect = 1e-76 Identities = 145/230 (63%), Positives = 178/230 (77%), Gaps = 4/230 (1%) Frame = -3 Query: 757 FPSKNEEWVATKLGKSSKAVKSNSMVAVDCEMVLCQDNTEALVQVCVVDENMEVKLNELV 578 FPS E W+ TK+ + K +SN+M+AVDCEMVLC+D TE LV+VCVVD N++VKLNELV Sbjct: 120 FPSHEEGWMVTKIRQKFKFTRSNAMLAVDCEMVLCEDGTEGLVRVCVVDRNLQVKLNELV 179 Query: 577 NPNKAIADYRTDITGLSAKDLEGVTCTLANVQKKMKKLLRHGTILVGHSLSNDLHALKLD 398 P+KA+ DYRT+ITG+SAKD + T +L ++Q+ MKKLL HG +LVGHSL NDL ALKLD Sbjct: 180 KPHKAVVDYRTEITGVSAKDFDETTSSLVDIQRSMKKLLSHGAVLVGHSLHNDLKALKLD 239 Query: 397 HARVIDTSYIFE---GPTRRKLSLNDLCKTILGYEVRKDGAPHNCLDDARAAMKLIIAKL 227 HARVIDT++I++ P R+ SLN+LCK+ILGYEVR+ APHNCLDDA AAMKL++AKL Sbjct: 240 HARVIDTAFIYKYENQPINRRPSLNNLCKSILGYEVRQKDAPHNCLDDASAAMKLVLAKL 299 Query: 226 EHGFDGTISCISKHVPESESAKLLLHGISMDVPKEELRRIFPG-FTFEFQ 80 E G D I + + VPE+E AKLLLH I DVP EEL RI PG FT E Q Sbjct: 300 EQGLDDAIPFVHEDVPENEMAKLLLHRIPTDVPIEELNRIIPGEFTMEHQ 349 >emb|CBI33775.3| unnamed protein product [Vitis vinifera] Length = 360 Score = 291 bits (744), Expect = 1e-76 Identities = 145/230 (63%), Positives = 178/230 (77%), Gaps = 4/230 (1%) Frame = -3 Query: 757 FPSKNEEWVATKLGKSSKAVKSNSMVAVDCEMVLCQDNTEALVQVCVVDENMEVKLNELV 578 FPS E W+ TK+ + K +SN+M+AVDCEMVLC+D TE LV+VCVVD N++VKLNELV Sbjct: 120 FPSHEEGWMVTKIRQKFKFTRSNAMLAVDCEMVLCEDGTEGLVRVCVVDRNLQVKLNELV 179 Query: 577 NPNKAIADYRTDITGLSAKDLEGVTCTLANVQKKMKKLLRHGTILVGHSLSNDLHALKLD 398 P+KA+ DYRT+ITG+SAKD + T +L ++Q+ MKKLL HG +LVGHSL NDL ALKLD Sbjct: 180 KPHKAVVDYRTEITGVSAKDFDETTSSLVDIQRSMKKLLSHGAVLVGHSLHNDLKALKLD 239 Query: 397 HARVIDTSYIFE---GPTRRKLSLNDLCKTILGYEVRKDGAPHNCLDDARAAMKLIIAKL 227 HARVIDT++I++ P R+ SLN+LCK+ILGYEVR+ APHNCLDDA AAMKL++AKL Sbjct: 240 HARVIDTAFIYKYENQPINRRPSLNNLCKSILGYEVRQKDAPHNCLDDASAAMKLVLAKL 299 Query: 226 EHGFDGTISCISKHVPESESAKLLLHGISMDVPKEELRRIFPG-FTFEFQ 80 E G D I + + VPE+E AKLLLH I DVP EEL RI PG FT E Q Sbjct: 300 EQGLDDAIPFVHEDVPENEMAKLLLHRIPTDVPIEELNRIIPGEFTMEHQ 349 >gb|AFK41173.1| unknown [Lotus japonicus] Length = 525 Score = 290 bits (741), Expect = 3e-76 Identities = 151/257 (58%), Positives = 191/257 (74%), Gaps = 6/257 (2%) Frame = -3 Query: 757 FPSKNEEWVATKLGKSSKAVKSNSMVAVDCEMVLCQDNTEALVQVCVVDENMEVKLNELV 578 F S +E WV L K+ KA++S +MVAVDCEMVLC+D TEALV+VCVVD N++VKL++ V Sbjct: 121 FQSIDEGWVIINLRKNKKAMRSTAMVAVDCEMVLCEDGTEALVEVCVVDHNLKVKLHKRV 180 Query: 577 NPNKAIADYRTDITGLSAKDLEGVTCTLANVQKKMKKLLRHGTILVGHSLSNDLHALKLD 398 P+KAI DYRT++TG+S++DLE VTCTLA++QKKMK+LL +GTILVGHSL NDL LKLD Sbjct: 181 KPDKAIVDYRTEVTGVSSRDLETVTCTLADIQKKMKRLLSNGTILVGHSLDNDLRVLKLD 240 Query: 397 HARVIDTSYIFE---GPTRRKLSLNDLCKTILGYEVRKDGAPHNCLDDARAAMKLIIAKL 227 H RV+DT+YIF+ G RK SLN LC+ +LGYEVR+ GAPHNCLDDA AAMKL++A++ Sbjct: 241 HVRVVDTAYIFQSLGGSIHRKPSLNGLCQAVLGYEVREKGAPHNCLDDACAAMKLVLARI 300 Query: 226 EHGFDG--TISCISKHVPESESAKLLLHGISMDVPKEELRRIFPG-FTFEFQPRLNIRKQ 56 +HG D + + +HV ES+ KL LHGI V E L +I PG FT E +P RK Sbjct: 301 KHGVDKEFPFTLVQEHVSESDMTKLPLHGIPTSVNIETLHKIVPGDFTTEVKPS---RKG 357 Query: 55 LQKKYSISAVFNDPQEA 5 + KYS A F + QEA Sbjct: 358 QRAKYSALATFKNQQEA 374 >ref|XP_003550038.1| PREDICTED: small RNA degrading nuclease 3-like [Glycine max] Length = 509 Score = 285 bits (730), Expect = 6e-75 Identities = 150/258 (58%), Positives = 185/258 (71%), Gaps = 6/258 (2%) Frame = -3 Query: 757 FPSKNEEWVATKLGKSSKAVKSNSMVAVDCEMVLCQDNTEALVQVCVVDENMEVKLNELV 578 FPS +E W+ K +KS MVAVDCEMVLC+D TEA+V+VCVVD N+EVKL++LV Sbjct: 118 FPSIDEGWIVVNFKNKPKVMKSTEMVAVDCEMVLCEDGTEAVVKVCVVDHNLEVKLDKLV 177 Query: 577 NPNKAIADYRTDITGLSAKDLEGVTCTLANVQKKMKKLLRHGTILVGHSLSNDLHALKLD 398 P+K IADYRT+ITG+S++DLE VTC+LA++QK MKKLL G ILVGHSL NDL LKLD Sbjct: 178 KPDKEIADYRTEITGVSSQDLEAVTCSLADIQKYMKKLLSSGIILVGHSLHNDLRVLKLD 237 Query: 397 HARVIDTSYIF---EGPTRRKLSLNDLCKTILGYEVRKDGAPHNCLDDARAAMKLIIAKL 227 H RVIDTSYIF +G ++ SLN LC+ +L +EVR+ GAPHNCLDDA+AAM L++AK+ Sbjct: 238 HVRVIDTSYIFQSLDGSIHKRPSLNSLCQAVLHHEVREKGAPHNCLDDAKAAMDLVLAKI 297 Query: 226 EHGFDG--TISCISKHVPESESAKLLLHGISMDVPKEELRRIFPG-FTFEFQPRLNIRKQ 56 +HG D I+ + +HVPESE AKLLLH I V E L +I PG F E +P RK Sbjct: 298 KHGVDKEFPIALVQEHVPESELAKLLLHKIPNTVNIETLHKILPGNFKIELKPS---RKG 354 Query: 55 LQKKYSISAVFNDPQEAD 2 YS A+F P EAD Sbjct: 355 QGANYSAFAIFRSPPEAD 372