BLASTX nr result

ID: Coptis24_contig00010293 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010293
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541968.1| PREDICTED: uncharacterized protein LOC100798...    91   8e-17
ref|XP_003539471.1| PREDICTED: uncharacterized protein LOC100527...    91   1e-16
ref|XP_002273863.2| PREDICTED: uncharacterized protein LOC100243...    87   2e-15
ref|XP_002312824.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15
ref|XP_002523822.1| conserved hypothetical protein [Ricinus comm...    81   1e-13

>ref|XP_003541968.1| PREDICTED: uncharacterized protein LOC100798012 [Glycine max]
          Length = 643

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 41/72 (56%), Positives = 53/72 (73%)
 Frame = -3

Query: 418 FPPPIPSIGRNGKPWVCYKSFRQDGRLVLKEMMIPTQGQEFMHACREHGRLTLHLVHADE 239
           +PPPI  IGR+GKPWVC++S+R +GR VL+E+ IPT   EF+HACRE GRL LH VH +E
Sbjct: 552 YPPPISCIGRSGKPWVCFRSYRSEGRFVLEEIRIPT--HEFLHACREDGRLKLHFVHPEE 609

Query: 238 EISADAAEVKDN 203
           E   +  E  D+
Sbjct: 610 EPIEEEEEDDDH 621


>ref|XP_003539471.1| PREDICTED: uncharacterized protein LOC100527149 [Glycine max]
          Length = 236

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 40/72 (55%), Positives = 54/72 (75%)
 Frame = -3

Query: 418 FPPPIPSIGRNGKPWVCYKSFRQDGRLVLKEMMIPTQGQEFMHACREHGRLTLHLVHADE 239
           +PPPI  IGR+GKPWVC++S+R +GR VL+E+ IPT   EF+HACRE GRL LH VH ++
Sbjct: 142 YPPPISCIGRSGKPWVCFRSYRSEGRFVLEEIRIPT--HEFLHACREDGRLKLHFVHHED 199

Query: 238 EISADAAEVKDN 203
           E   +  E +D+
Sbjct: 200 EPIEEEEEEEDD 211


>ref|XP_002273863.2| PREDICTED: uncharacterized protein LOC100243219 [Vitis vinifera]
          Length = 813

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 40/65 (61%), Positives = 47/65 (72%)
 Frame = -3

Query: 418 FPPPIPSIGRNGKPWVCYKSFRQDGRLVLKEMMIPTQGQEFMHACREHGRLTLHLVHADE 239
           FPPPI  IG++GKPWV +KS+R DGR VLKE+ IP   QE +HACRE GRL LH V  DE
Sbjct: 695 FPPPISCIGKSGKPWVSFKSYRHDGRFVLKEIRIP--NQELLHACREDGRLKLHFVQPDE 752

Query: 238 EISAD 224
            +  D
Sbjct: 753 ILEED 757


>ref|XP_002312824.1| predicted protein [Populus trichocarpa] gi|222849232|gb|EEE86779.1|
           predicted protein [Populus trichocarpa]
          Length = 270

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 43/76 (56%), Positives = 55/76 (72%), Gaps = 2/76 (2%)
 Frame = -3

Query: 424 RNFPPPIPSIGRNGKPWVCYKSFRQDGRLVLKEMMIPTQGQEFMHACREHGRLTLHLVHA 245
           R FPPPI  IGR+GKP V +KS+R DGR VLKE+ +PT   EF+ ACRE GRLTL  VH 
Sbjct: 177 RAFPPPISCIGRSGKPQVIFKSYRHDGRFVLKEVRMPT--LEFLRACREDGRLTLQFVHP 234

Query: 244 DEEIS--ADAAEVKDN 203
           ++EI+   D  EV+++
Sbjct: 235 NDEITDEGDEEEVEED 250


>ref|XP_002523822.1| conserved hypothetical protein [Ricinus communis]
           gi|223536910|gb|EEF38548.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 291

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 38/72 (52%), Positives = 51/72 (70%)
 Frame = -3

Query: 418 FPPPIPSIGRNGKPWVCYKSFRQDGRLVLKEMMIPTQGQEFMHACREHGRLTLHLVHADE 239
           FPPPI  IG++GKPWV +KS+R DGR VLK++ IP+  QEF+HA RE GRL LH V  ++
Sbjct: 196 FPPPISCIGKSGKPWVSFKSYRHDGRFVLKQVRIPS--QEFLHAHREDGRLKLHFVQPND 253

Query: 238 EISADAAEVKDN 203
            I  +    ++N
Sbjct: 254 GIHEEEEGEEEN 265


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